Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15645866

GI number: 15645866

Start: 1327124

End: 1328908

Strand: Reverse

Name: Not Available

Synonym: HP1252

Alternate gene names: 15645866

Gene position: 1328908-1327124 (Counterclockwise)

Preceding gene: 15645867

Following gene: 15645865

Centisome position: 79.68

GC content: 39.78

Gene sequence:

>1785_bases
GTGGTCTTTAAAATTTTAGGTTTATGGTTAGGGGTGTTTTGTTTCCTTGAGGCTACGCCTTATTTATACTTGGGCGAAGA
GCCTAAATATAAAGACAATTTCACGCATTTTGAATACGCTAACCCTAACGCTAAAAAGGGCGGTGTTTTAAGGAATGACG
CCATAGGGACTTTTGATAGCCTTAACCCTTTCGCGCTTAAAGGCACTAAAGCTGAAGGCTTGGATCTGATTTATGACACT
TTAATGGTGCAAAGTTTAGACGAACCTTTTGCCGAATACCCCTTGATCGCTAAAGACGCAGAAGTGGCTAAGGATAACAG
CTATGTGATTTTTACGATAGATAAAAGAGCGAGATTTAGCAATAACGCTCCCATTTTAGCGAGCGACGTGAAGTTTAGTT
TTGATACGATCATGAAATTAGGATCGCCTATTTATAGGCAGTATTACCAAGATGTTAAAAAGGCGGTTGTTTTAGACAAA
CACCATGTTAAATTCATTTTCAAAACCACTGAAAATAAAGAGTTGCCTCTCATTTTAGGGCAGTTGCAGATCTTTTCCAA
AAAAGCGTTTCAAGAGGATTATTTTGAAAAAAACCCCTTACTCATTCCTGTTTCTAGCGGCCCTTATGTGATCGCTTCTT
TTGATGTGGGCAAGAAAATCACCTACCAAAGAAACCCTAATTATTGGGCGAGGAATTTGCCTAGCAGAAAGGGGCAATTC
AATTTTGATCAAATCAAATTTGAGTATTACAAAGACGAAACCATCGCCTTACAGGCTTTTTTAAGTGGGGCGTATGATTG
GCGTCTTGAAAGCACGGCTAAGGTTTGGGCTAGGGGCTATGTGGGGAAAGCTATGGACAATAAAGAGATTACGAAATATT
TGATAGCCCACAAAATGCCAAGCGGCATGCAAGGGTTTTTCTTCAACACGCGCCGAGAAATTTTCAAGGATAAAAGGGTG
CGTGAAGCCTTATTTTATGCGTTTGATTTTGAATGGGCGAATAAAAATTTGTTTTTTTCGCAATACAAGCGCACCACCAG
TTTTTTCAGTAACTCTATCTATGCGTCCCCTCCCCTCCCAAGCCCTGAAGAAAAAGCCTTGCTAGCCCCTTATGAAAAGA
GTTTGGATGAAAGGGTTTTTAAAGAGCCTTATGTCGTGCCTAGAACCGATGGAGTTGATGTTTTAGGCTATAATTTGAGG
GAAAATTTAAAATACGCCCAAAAGCTTTTAGAGAGCACGGGCTTTTCTTACAAAAACATGCGTTTGGTGGATAAGAATAA
CAAGCCTTTCAGTTTCACTTTGCTTTTAAATAGCCCGGCATTTGAAAGACTGGCCCTAGCTTTTGCTAAAAACTTAAGGG
TGTTAGGGATTGAAATGAAAATCCAAAGAGTGGATTTAAGCCAGTATGTCAATCGGATCAAAAGCTATGATTTTGACATG
ATTGTAGGAGTGATTGGCCAATCGTCTTTCCCAGGTAATGAGCAGCGCTTTTATTTTGGTTCTTTGAGTGCGAAAGAAAA
AGGCACAAGGAATTATGCGGGAATCTCTAGTAAAGCGGTAGATGATTTGATTGAAAAAATCATTAACGCTAAAGATTACA
AGGAACAATTGGCCGCCATTCAAGCGATGGATAGGGTATTGTTGTGGGGGTTTTATGTGATACCGCATTTTTATTTGCCT
AATTACAGGATCGCAGCGTATAATTACATTGGCATGCCTGAAATCAGCCCTAGCTATGGATTTTCGCCGTATTTGTGGTG
GATAAAAGAAAAGGATCTTCAATGA

Upstream 100 bases:

>100_bases
TGATGAAGTGAAAGCCATTTTAAATGGCGGAGCCGAAAAAGCCAGGCCTTTAGCGAGAGCGACTTACCAAAAGGCTAAAG
AATTGATGGGGTTAATTTGA

Downstream 100 bases:

>100_bases
TTGCTTACATTCTCAAACGCTTGCTTTTGATTATCCCTACTTTATTAGCTATCATGACCATTAATTTCTTTTTGATCCAA
TCGGCTCCTGGAGGCCCTAT

Product: oligopeptide ABC transporter periplasmic oligopeptide-binding protein (oppA)

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MVFKILGLWLGVFCFLEATPYLYLGEEPKYKDNFTHFEYANPNAKKGGVLRNDAIGTFDSLNPFALKGTKAEGLDLIYDT
LMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTIDKRARFSNNAPILASDVKFSFDTIMKLGSPIYRQYYQDVKKAVVLDK
HHVKFIFKTTENKELPLILGQLQIFSKKAFQEDYFEKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWARNLPSRKGQF
NFDQIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAMDNKEITKYLIAHKMPSGMQGFFFNTRREIFKDKRV
REALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSPEEKALLAPYEKSLDERVFKEPYVVPRTDGVDVLGYNLR
ENLKYAQKLLESTGFSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDM
IVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLP
NYRIAAYNYIGMPEISPSYGFSPYLWWIKEKDLQ

Sequences:

>Translated_594_residues
MVFKILGLWLGVFCFLEATPYLYLGEEPKYKDNFTHFEYANPNAKKGGVLRNDAIGTFDSLNPFALKGTKAEGLDLIYDT
LMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTIDKRARFSNNAPILASDVKFSFDTIMKLGSPIYRQYYQDVKKAVVLDK
HHVKFIFKTTENKELPLILGQLQIFSKKAFQEDYFEKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWARNLPSRKGQF
NFDQIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAMDNKEITKYLIAHKMPSGMQGFFFNTRREIFKDKRV
REALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSPEEKALLAPYEKSLDERVFKEPYVVPRTDGVDVLGYNLR
ENLKYAQKLLESTGFSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDM
IVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLP
NYRIAAYNYIGMPEISPSYGFSPYLWWIKEKDLQ
>Mature_594_residues
MVFKILGLWLGVFCFLEATPYLYLGEEPKYKDNFTHFEYANPNAKKGGVLRNDAIGTFDSLNPFALKGTKAEGLDLIYDT
LMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTIDKRARFSNNAPILASDVKFSFDTIMKLGSPIYRQYYQDVKKAVVLDK
HHVKFIFKTTENKELPLILGQLQIFSKKAFQEDYFEKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWARNLPSRKGQF
NFDQIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAMDNKEITKYLIAHKMPSGMQGFFFNTRREIFKDKRV
REALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSPEEKALLAPYEKSLDERVFKEPYVVPRTDGVDVLGYNLR
ENLKYAQKLLESTGFSYKNMRLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDM
IVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAIQAMDRVLLWGFYVIPHFYLP
NYRIAAYNYIGMPEISPSYGFSPYLWWIKEKDLQ

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=603, Percent_Identity=38.6401326699834, Blast_Score=389, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68796; Mature: 68796

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKILGLWLGVFCFLEATPYLYLGEEPKYKDNFTHFEYANPNAKKGGVLRNDAIGTFDS
CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCC
LNPFALKGTKAEGLDLIYDTLMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTIDKRARFS
CCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHCCCEECCCHHCCCCCEEEEEEECCCCCC
NNAPILASDVKFSFDTIMKLGSPIYRQYYQDVKKAVVLDKHHVKFIFKTTENKELPLILG
CCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEH
QLQIFSKKAFQEDYFEKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWARNLPSRKGQF
HHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHCCCCCCCCC
NFDQIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAMDNKEITKYLIAHKMP
CHHEEEEEEECCCHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
SGMQGFFFNTRREIFKDKRVREALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLP
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHCCCEEECCCCC
SPEEKALLAPYEKSLDERVFKEPYVVPRTDGVDVLGYNLRENLKYAQKLLESTGFSYKNM
CCCCCCEECCHHHHHHHHHHHCCCEEECCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEE
RLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDM
EEEECCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHCCCHHH
IVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAI
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
QAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEISPSYGFSPYLWWIKEKDLQ
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MVFKILGLWLGVFCFLEATPYLYLGEEPKYKDNFTHFEYANPNAKKGGVLRNDAIGTFDS
CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCC
LNPFALKGTKAEGLDLIYDTLMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTIDKRARFS
CCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHCCCEECCCHHCCCCCEEEEEEECCCCCC
NNAPILASDVKFSFDTIMKLGSPIYRQYYQDVKKAVVLDKHHVKFIFKTTENKELPLILG
CCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEH
QLQIFSKKAFQEDYFEKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWARNLPSRKGQF
HHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHCCCCCCCCC
NFDQIKFEYYKDETIALQAFLSGAYDWRLESTAKVWARGYVGKAMDNKEITKYLIAHKMP
CHHEEEEEEECCCHHHHHHHHCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
SGMQGFFFNTRREIFKDKRVREALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLP
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHCCCEEECCCCC
SPEEKALLAPYEKSLDERVFKEPYVVPRTDGVDVLGYNLRENLKYAQKLLESTGFSYKNM
CCCCCCEECCHHHHHHHHHHHCCCEEECCCCCCEEECCHHHHHHHHHHHHHHCCCCCCEE
RLVDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRIKSYDFDM
EEEECCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHCCCHHH
IVGVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAI
HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
QAMDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEISPSYGFSPYLWWIKEKDLQ
HHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA