Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15645857

GI number: 15645857

Start: 1317838

End: 1320039

Strand: Reverse

Name: Not Available

Synonym: HP1243

Alternate gene names: NA

Gene position: 1320039-1317838 (Counterclockwise)

Preceding gene: 15645858

Following gene: 15645855

Centisome position: 79.15

GC content: 45.64

Gene sequence:

>2202_bases
ATGAAAAAACACATCCTTTCATTAGCTTTAGGCTCGCTTTTAGTTTCCACTTTGAGCGCTGAAGACGACGGCTTTTACAC
AAGCGTAGGCTATCAGATCGGTGAAGCCGCTCAAATGGTAACAAACACCAAAGGCATCCAACAGCTTTCAGACAATTATG
AAAATTTGAACAACCTTTTAACGAGATACAGCACCCTAAACACCCTTATCAAATTGTCCGCTGATCCGAGCGCAATTAAT
GCGGTGCGGGAAAATCTGGGCGCGAGCGCGAAGAATTTGATCGGCGATAAAGCCAACTCCCCCGCCTATCAAGCCGTGCT
TTTAGCGATCAACGCGGCGGTAGGGTTTTGGAATGTCGTGGGCTATGTGACGCAATGTGGGGGTAACGCCAATGGTCAAG
AAAGCACCTCTTCAACCACCATCTTCAACAACGAGCCAGGGTATCGATCCACTTCCATCACTTGTTCTTTGAACGGGCAT
AAGCCTGGATACTATGGCCCTATGAGCATTGAGAATTTTAAAAAGCTTAACGAAGCCTATCAGATCCTCCAAACGGCTTT
AAAAAACGGCTTACCCGCGCTCAAAGAAAACAACGGGAAGGTCAGTGTAACCTATACCTACACATGCTCAGGGCAAGGGA
ATAATAACTGCTCGCCAAGTGTCAACGGAACCAAAACCACAACCCAAACCATAGACGGCAAAAGCGTAACCACCACGATC
AGTTCAAAAGTGGTTGGTAGCATCGCTAGTGGCAACACATCACATGTCATCACCAACAAATTAGACGGTGTGCCTGATAG
CGCTCAAGCGCTCTTAGCGCAAGCGAGCACGCTCATCAACACCATCAACGAAGCATGCCCGTATTTCCATGCTACTAATA
GTAGTGAGGCTAACGCCCCAAAATTCTCTACTACTACTGGGAAAATATGCGGCGCTTTTTCAGAAGAAATCAGCGCGATC
CAAAAGATGATCACGGACGCGCAAGAGCTAGTTAATCAAACGAGCGTCATTAACAGCAACGAACAATCAACTCCGGTAGG
CAATAATAATGGCAAGCCTTTCAACCCTTTCACGGACGCAAGTTTTGCGCAAGGCATGCTCGCTAACGCTAGCGCGCAAG
CTAAAATGCTCAATTTAGCCCATCAGGTGGGGCAAGCCATTAACCCAGAGAATCTTAGCGAGAATTTTAAAAATTTTGTT
ACAGGCTTTTTAGCCACATGCAATAACAAATCAACAGCTGGCACTGGTGGCACACAAGGTTCAGCTCCAGGCACAGTGAC
CACTCAAACTTTCGCTTCTGGTTGCGCGTATGTGGAGCAAACCCTAACGAACTTAGGCAACAGCATCGCTCACTTTGGCA
CTCAAGAGCAGCAGATACAGCAAGCCGAAAACATCGCTGACACTCTAGTGAATTTCAAATCTAGATACAGCGAATTAGGC
AACACCTATAACAGCATCACCACCGCGCTCTCCAAAGTCCCTAACGCGCAAAGCTTGCAAAACGTGGTGAGCAAAAAGAA
TAACCCCTATAGCCCTCAAGGCATAGAGACCAATTACTACCTCAATCAAAATTCTTACAACCAAATCCAAACCATCAACC
AAGAACTAGGGCGTAACCCCTTTAGGAAAGTGGGCATCGTCAATTCTCAAACCAACAATGGTGCCATGAATGGGATCGGT
ATTCAGGTGGGCTATAAGCAATTCTTTGGCCAAAAAAGAAAATGGGGCGCTAGGTATTACGGCTTTTTTGATTACAACCA
TGCGTTCATCAAATCCAGCTTTTTCAACTCGGCTTCTGACGTGTGGACTTATGGTTTTGGAGCGGACGCGCTTTATAACT
TCATCAACGATAAAGCCACCAATTTCTTAGGCAAAAACAACAAGCTTTCTTTGGGGCTTTTTGGCGGGATTGCGTTAGCG
GGCACTTCATGGCTCAATTCTGAGTACGTGAATTTAGCCACCGTGAATAACGTCTATAACGCTAAAATGAATGTGGCGAA
TTTCCAATTCTTATTCAATATGGGAGTGAGGATGAATTTAGCCAGATCCAAGAAAAAAGGCAGCGATCATGCAGCTCAGC
ATGGGATTGAGTTAGGGCTTAAAATCCCCACCATCAACACGAACTATTATTCCTTTATGGGGGCTGAACTCAAATACAGA
AGGCTCTATAGCGTGTATTTGAACTATGTGTTCGCTTACTAA

Upstream 100 bases:

>100_bases
CCAAATACATTCTAATAGCAAATGCGTTCTAATGCAAATGCATTCCAATGTATGAAATCCCTAATACTAAATCCAATTTA
ATCCAAAAAGGAGAAAAAAC

Downstream 100 bases:

>100_bases
TGTTTGGCTCTTTGTGAAACTCCCTTTTTAAGGGGTTTTTTTTTGAACTCTCTTTTTAAATTCTCTTTTTAAAGAGATTT
CTTTTTTTTAAGCTTTTTTT

Product: outer membrane protein (omp28)

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 733; Mature: 733

Protein sequence:

>733_residues
MKKHILSLALGSLLVSTLSAEDDGFYTSVGYQIGEAAQMVTNTKGIQQLSDNYENLNNLLTRYSTLNTLIKLSADPSAIN
AVRENLGASAKNLIGDKANSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNGH
KPGYYGPMSIENFKKLNEAYQILQTALKNGLPALKENNGKVSVTYTYTCSGQGNNNCSPSVNGTKTTTQTIDGKSVTTTI
SSKVVGSIASGNTSHVITNKLDGVPDSAQALLAQASTLINTINEACPYFHATNSSEANAPKFSTTTGKICGAFSEEISAI
QKMITDAQELVNQTSVINSNEQSTPVGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQAINPENLSENFKNFV
TGFLATCNNKSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTLTNLGNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELG
NTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIG
IQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSLGLFGGIALA
GTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYR
RLYSVYLNYVFAY

Sequences:

>Translated_733_residues
MKKHILSLALGSLLVSTLSAEDDGFYTSVGYQIGEAAQMVTNTKGIQQLSDNYENLNNLLTRYSTLNTLIKLSADPSAIN
AVRENLGASAKNLIGDKANSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNGH
KPGYYGPMSIENFKKLNEAYQILQTALKNGLPALKENNGKVSVTYTYTCSGQGNNNCSPSVNGTKTTTQTIDGKSVTTTI
SSKVVGSIASGNTSHVITNKLDGVPDSAQALLAQASTLINTINEACPYFHATNSSEANAPKFSTTTGKICGAFSEEISAI
QKMITDAQELVNQTSVINSNEQSTPVGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQAINPENLSENFKNFV
TGFLATCNNKSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTLTNLGNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELG
NTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIG
IQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSLGLFGGIALA
GTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYR
RLYSVYLNYVFAY
>Mature_733_residues
MKKHILSLALGSLLVSTLSAEDDGFYTSVGYQIGEAAQMVTNTKGIQQLSDNYENLNNLLTRYSTLNTLIKLSADPSAIN
AVRENLGASAKNLIGDKANSPAYQAVLLAINAAVGFWNVVGYVTQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNGH
KPGYYGPMSIENFKKLNEAYQILQTALKNGLPALKENNGKVSVTYTYTCSGQGNNNCSPSVNGTKTTTQTIDGKSVTTTI
SSKVVGSIASGNTSHVITNKLDGVPDSAQALLAQASTLINTINEACPYFHATNSSEANAPKFSTTTGKICGAFSEEISAI
QKMITDAQELVNQTSVINSNEQSTPVGNNNGKPFNPFTDASFAQGMLANASAQAKMLNLAHQVGQAINPENLSENFKNFV
TGFLATCNNKSTAGTGGTQGSAPGTVTTQTFASGCAYVEQTLTNLGNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELG
NTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNPFRKVGIVNSQTNNGAMNGIG
IQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSLGLFGGIALA
GTSWLNSEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYR
RLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79129; Mature: 79129

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHILSLALGSLLVSTLSAEDDGFYTSVGYQIGEAAQMVTNTKGIQQLSDNYENLNNLL
CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRYSTLNTLIKLSADPSAINAVRENLGASAKNLIGDKANSPAYQAVLLAINAAVGFWNVV
HHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GYVTQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNGHKPGYYGPMSIENFKKLNEAY
HHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
QILQTALKNGLPALKENNGKVSVTYTYTCSGQGNNNCSPSVNGTKTTTQTIDGKSVTTTI
HHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEHHH
SSKVVGSIASGNTSHVITNKLDGVPDSAQALLAQASTLINTINEACPYFHATNSSEANAP
HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
KFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINSNEQSTPVGNNNGKPFNPFTDA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SFAQGMLANASAQAKMLNLAHQVGQAINPENLSENFKNFVTGFLATCNNKSTAGTGGTQG
HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SAPGTVTTQTFASGCAYVEQTLTNLGNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELG
CCCCCEEHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNP
CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCH
FRKVGIVNSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASD
HHHCCCEECCCCCCCCCCEEEEECHHHHCCCHHCCCCEEEEEECCCHHHHHHHHCCCCCH
VWTYGFGADALYNFINDKATNFLGKNNKLSLGLFGGIALAGTSWLNSEYVNLATVNNVYN
HEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHCCCCCEEEEEECCHHH
AKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYR
CEECHHHEEEEECCCCEEEHHHHHCCCCHHHHHCCCEEEEEECEECCCHHHHHCCHHHHH
RLYSVYLNYVFAY
HHHHHHHHHHHCC
>Mature Secondary Structure
MKKHILSLALGSLLVSTLSAEDDGFYTSVGYQIGEAAQMVTNTKGIQQLSDNYENLNNLL
CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRYSTLNTLIKLSADPSAINAVRENLGASAKNLIGDKANSPAYQAVLLAINAAVGFWNVV
HHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GYVTQCGGNANGQESTSSTTIFNNEPGYRSTSITCSLNGHKPGYYGPMSIENFKKLNEAY
HHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
QILQTALKNGLPALKENNGKVSVTYTYTCSGQGNNNCSPSVNGTKTTTQTIDGKSVTTTI
HHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEHHH
SSKVVGSIASGNTSHVITNKLDGVPDSAQALLAQASTLINTINEACPYFHATNSSEANAP
HHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
KFSTTTGKICGAFSEEISAIQKMITDAQELVNQTSVINSNEQSTPVGNNNGKPFNPFTDA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SFAQGMLANASAQAKMLNLAHQVGQAINPENLSENFKNFVTGFLATCNNKSTAGTGGTQG
HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SAPGTVTTQTFASGCAYVEQTLTNLGNSIAHFGTQEQQIQQAENIADTLVNFKSRYSELG
CCCCCEEHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NTYNSITTALSKVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNSYNQIQTINQELGRNP
CHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCH
FRKVGIVNSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYNHAFIKSSFFNSASD
HHHCCCEECCCCCCCCCCEEEEECHHHHCCCHHCCCCEEEEEECCCHHHHHHHHCCCCCH
VWTYGFGADALYNFINDKATNFLGKNNKLSLGLFGGIALAGTSWLNSEYVNLATVNNVYN
HEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCHHCCCCCEEEEEECCHHH
AKMNVANFQFLFNMGVRMNLARSKKKGSDHAAQHGIELGLKIPTINTNYYSFMGAELKYR
CEECHHHEEEEECCCCEEEHHHHHCCCCHHHHHCCCEEEEEECEECCCHHHHHCCHHHHH
RLYSVYLNYVFAY
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA