| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645824
GI number: 15645824
Start: 1286969
End: 1287484
Strand: Reverse
Name: Not Available
Synonym: HP1210
Alternate gene names: 15645824
Gene position: 1287484-1286969 (Counterclockwise)
Preceding gene: 15645826
Following gene: 15645823
Centisome position: 77.19
GC content: 50.97
Gene sequence:
>516_bases ATGCTGGATTTGTCTTATAGCCTGGAGCGTGTCTTGCAAGAAGACCCGGCAGCTAGGAATAAGTGGGAGGTTCTTTTGCT TTATCCGGGCATTCATGCGCTGCTTTGTTACCGCCTAGCGCATGCGTTGCACAAGCGGAGGTTTTACTTCATTGCGCGCG CGCTTTCTCAGTTAGCGCGCTTTATCACTGGGATAGAAATCCACCCTGGCGCTAAGATTGGGAGAGGGCTTTTTATTGAT CATGGCATGGGTGTGGTGATTGGCGAGACCACAGAGATTGGAGATGATGTTACCATTTATCATGGCGTAACTCTAGGAGG CACGGGTAAGTTCAAGGGCAAGCGCCACCCTACTTTAGGCAATCGTGTGGTAGTGGGGGCAGGGGCTAAGGTCTTGGGTG CGATTTGCGTGGGCGATGATGTGAAGATTGGAGCTAATGCGGTGGTGCTTTCAGATTTGCCCACGGGTTCTACGGCTGTA GGATCTAAAGCCAAAACCATCACAAAGGATCGTTAA
Upstream 100 bases:
>100_bases AGGTATAATGACAAGAAAAATTTGCATCAAGTTTTATTGGAATGGGTGAGAAAAAATCTGCTCATGTTGATTCAAATATA TTCCAACCGGAGACTCTATC
Downstream 100 bases:
>100_bases TTTTAAACAAGCGGTTGGAGTTTGCGCCATGCGGGTTATTTTGAAATAAATTGATTAGAATTTATGAAATTTTATAGAGA GAATTTTAAAGATGAATAAA
Product: serine acetyltransferase (cysE)
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFID HGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAV GSKAKTITKDR
Sequences:
>Translated_171_residues MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFID HGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAV GSKAKTITKDR >Mature_171_residues MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFID HGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAV GSKAKTITKDR
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=163, Percent_Identity=45.398773006135, Blast_Score=129, Evalue=9e-32, Organism=Escherichia coli, GI1788371, Length=164, Percent_Identity=39.0243902439024, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 18343; Mature: 18343
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHKRRFYFIARALSQLAR CCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLG HHHCCEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC NRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAVGSKAKTITKDR CEEEEECCHHHEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHKRRFYFIARALSQLAR CCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLG HHHCCEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC NRVVVGAGAKVLGAICVGDDVKIGANAVVLSDLPTGSTAVGSKAKTITKDR CEEEEECCHHHEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]