| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645822
GI number: 15645822
Start: 1285193
End: 1286182
Strand: Reverse
Name: Not Available
Synonym: HP1208
Alternate gene names: 15645822
Gene position: 1286182-1285193 (Counterclockwise)
Preceding gene: 15645823
Following gene: 15645821
Centisome position: 77.12
GC content: 37.07
Gene sequence:
>990_bases ATGAACTACATCGGTTCTAAATACAAGCTCATTCCCTTTATTAAGGAAAATATCCATGCGGTTGTAGGGGACAACCTTTC TGGCACGATTTTTTGTGATCTGTTCGCTGGGACGGGCATTGTGGGGCGTGCATTTAAAAAAGCAGTTAATAAGGTTATTT CTAATGATTTGGAATATTATAGCTTTGTTTTGAATCAAAATTATATCGGCAACATTCAAGAAATCCCTAATCAAGAAGAG CTTATTAATGAGATTAATAGCGTTGCTTTAAAAAAGGGCTTTATCTATTCGTATTATTCTTTAGGGGGGAGCTCAAGGCA GTATTTTAGCGAAACAAACGCTCAAAAAATTGATGCGATGCGTCTAAAAATTGAAGAGCTTAAACTTTCTCAAAACATTG ATAATTGCACGTATTACTTTTTGCTCGCATCGCTATTAGAAAGCGCGGACAAGGTGGCTAATACCGCTTCAGTTTATGGG GCTTTTTTAAAACGCCTTAAAAAAAGCGCTCAAAAAGAACTTATCTTAAAAGGCGCTGATTTTGATTTGAGTTTAAACGC TAACGAAGTGTATCAGCAAGACGCTAGCGAGTTGATCGGAAAGATTTCAGGGGATATTTTGTATTTAGACCCTCCTTATA ATGCGAGGCAATACGGGGCTAATTACCATTTATTAAACACGATTGCTATTTATACGCCCTTTGCTCCAAAAGGCAAAACC GGCTTGCCCAGTTACCAGAAATCATCGTTTTGCTCTCGCGCTAAAATCTTAAACGCTTTTGAAAACTTGATCAAAACAGC GCGATTCAAATACATCTTTTTAAGCTATAACAATGAAGGGCTTATGAGTGAAACAGAGATTGGGAATATTTTAAAAAAAT ACGGCACTTACTCCTTAATGACCAAAACCTACATGCGTTTTAAAGCGGATAACAAACGCACCCATAAAGCCGCACACACC AAAGAATGTTTGCATATTCTTATCAAATAA
Upstream 100 bases:
>100_bases AAACTTGTAATGATAGGATATACAATGAAGGGTATCAAAAAGGCTATAGTGATGGGTATCAAATTGGATACCATCAAAAA ACTACTTTATAGCGGTTGCA
Downstream 100 bases:
>100_bases GAGTCAAAATAGCCCAACCTTTAAAAACGAGCTTTAAGTTAAAAGTCTAAAGAGCGTTAGAGTTTTTAAATAAGGCTTTA GCGGGCAGTATTTGATTAAA
Product: ulcer associated adenine specific DNA methyltransferase
Products: NA
Alternate protein names: M.NlaIII; Adenine-specific methyltransferase NlaIII [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNYIGSKYKLIPFIKENIHAVVGDNLSGTIFCDLFAGTGIVGRAFKKAVNKVISNDLEYYSFVLNQNYIGNIQEIPNQEE LINEINSVALKKGFIYSYYSLGGSSRQYFSETNAQKIDAMRLKIEELKLSQNIDNCTYYFLLASLLESADKVANTASVYG AFLKRLKKSAQKELILKGADFDLSLNANEVYQQDASELIGKISGDILYLDPPYNARQYGANYHLLNTIAIYTPFAPKGKT GLPSYQKSSFCSRAKILNAFENLIKTARFKYIFLSYNNEGLMSETEIGNILKKYGTYSLMTKTYMRFKADNKRTHKAAHT KECLHILIK
Sequences:
>Translated_329_residues MNYIGSKYKLIPFIKENIHAVVGDNLSGTIFCDLFAGTGIVGRAFKKAVNKVISNDLEYYSFVLNQNYIGNIQEIPNQEE LINEINSVALKKGFIYSYYSLGGSSRQYFSETNAQKIDAMRLKIEELKLSQNIDNCTYYFLLASLLESADKVANTASVYG AFLKRLKKSAQKELILKGADFDLSLNANEVYQQDASELIGKISGDILYLDPPYNARQYGANYHLLNTIAIYTPFAPKGKT GLPSYQKSSFCSRAKILNAFENLIKTARFKYIFLSYNNEGLMSETEIGNILKKYGTYSLMTKTYMRFKADNKRTHKAAHT KECLHILIK >Mature_329_residues MNYIGSKYKLIPFIKENIHAVVGDNLSGTIFCDLFAGTGIVGRAFKKAVNKVISNDLEYYSFVLNQNYIGNIQEIPNQEE LINEINSVALKKGFIYSYYSLGGSSRQYFSETNAQKIDAMRLKIEELKLSQNIDNCTYYFLLASLLESADKVANTASVYG AFLKRLKKSAQKELILKGADFDLSLNANEVYQQDASELIGKISGDILYLDPPYNARQYGANYHLLNTIAIYTPFAPKGKT GLPSYQKSSFCSRAKILNAFENLIKTARFKYIFLSYNNEGLMSETEIGNILKKYGTYSLMTKTYMRFKADNKRTHKAAHT KECLHILIK
Specific function: This methylase recognizes the double-stranded sequence CATG, causes specific methylation on A-2 on both strands and protects the DNA from cleavage by the NlaIII endonuclease [H]
COG id: COG3392
COG function: function code L; Adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 37228; Mature: 37228
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYIGSKYKLIPFIKENIHAVVGDNLSGTIFCDLFAGTGIVGRAFKKAVNKVISNDLEYY CCCCCCCEEEHHHHHHCCCEEECCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHCCHHHH SFVLNQNYIGNIQEIPNQEELINEINSVALKKGFIYSYYSLGGSSRQYFSETNAQKIDAM HHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEEHHHCCCCCHHHHHHCCHHHHHHH RLKIEELKLSQNIDNCTYYFLLASLLESADKVANTASVYGAFLKRLKKSAQKELILKGAD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC FDLSLNANEVYQQDASELIGKISGDILYLDPPYNARQYGANYHLLNTIAIYTPFAPKGKT CEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCEEEEEEEEEECCCCCCCCC GLPSYQKSSFCSRAKILNAFENLIKTARFKYIFLSYNNEGLMSETEIGNILKKYGTYSLM CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHH TKTYMRFKADNKRTHKAAHTKECLHILIK HHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYIGSKYKLIPFIKENIHAVVGDNLSGTIFCDLFAGTGIVGRAFKKAVNKVISNDLEYY CCCCCCCEEEHHHHHHCCCEEECCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHCCHHHH SFVLNQNYIGNIQEIPNQEELINEINSVALKKGFIYSYYSLGGSSRQYFSETNAQKIDAM HHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCEEEHHHCCCCCHHHHHHCCHHHHHHH RLKIEELKLSQNIDNCTYYFLLASLLESADKVANTASVYGAFLKRLKKSAQKELILKGAD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC FDLSLNANEVYQQDASELIGKISGDILYLDPPYNARQYGANYHLLNTIAIYTPFAPKGKT CEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCEEEEEEEEEECCCCCCCCC GLPSYQKSSFCSRAKILNAFENLIKTARFKYIFLSYNNEGLMSETEIGNILKKYGTYSLM CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHH TKTYMRFKADNKRTHKAAHTKECLHILIK HHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2277628 [H]