| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645801
GI number: 15645801
Start: 1256746
End: 1257903
Strand: Reverse
Name: Not Available
Synonym: HP1187
Alternate gene names: NA
Gene position: 1257903-1256746 (Counterclockwise)
Preceding gene: 15645802
Following gene: 15645799
Centisome position: 75.42
GC content: 33.68
Gene sequence:
>1158_bases ATGGAATCAGTAAAAACAGGAAAAACAAATAAGGTTGGCAAGAATACAGAGATGGCTAATACAAAGGCAAATAAAGAGGC TCATTTTAAACAAGCGAGCACCATTACAAATATAATCAGATCAATTCGTGGGATTTTTACAAAAATTGCAAAGAAAGTTA GAGGACTTGTAAAAAAACACCCCAAGAAAAGCAGTGCGGCATTAGTAGTATTGACCCATATTGCGTGCAAGAAAGCGAAA GAATTAGACGATAAAGTCCAAGATAAATCCAAACAAGCTGAAAAAGAAAATCAAATCAATTGGTGGAAATATTCAGGATT AACAATAGCGACAAGTTTATTATTAGCCGCTTGTAGCACTGGTGATGTTAGTGAACAAATAGAACTAGAACAAGAAAAAC AAAAGACGAGCAATATAGAGACTAACAATCAAATAAAAGTAGAACAAGAAAAACAAAAGACAAGCAATATAGAGACTAAT AATCAAATAAAAGTAGAACAAGAACAACAGAAAACAGAACAAGAAAGACAGAAAACAGAACAAGAAAGACAGAAGACAGA ACAAGAAAAACAAAAGACCATTAAAACACAGAAAGATTTCATTAAATATGTAGAACAAAATTGCCAAGAAAATCATAATC AATTCTTTATTGAAAAAGGAGGAATTAAGGCTGGTATTGGTATAGAAGTAGAAGCTGAATGCAAAACCCCTAAACCTGCA AAAACCAATCAAACCCCTATCCAGCCAAAACACCTCCCAAACTCTAAACAACCCCGCTCTCAAAGAGGATCAAAAGCGCA AGAGCTTATCGCTTATTTGCAAAAAGAGCTAGAATCTCTGCCCTATTCACAAAAAGCTATCGCTAAACAAGTGGATTTTT ATAGACCAAGTTCTATCGCTTATTTAGAACTAGACCCTAGAGATTTTAATGTTACAGAAGAATGGCAAAAAGAAAATTTA AAAATACGCTCTAAAGCTCAAGCTAAAATGCTTGAAATGAGGAGTTTAAAACCAGACTCACAAGCCCACCTTTCAACCTC TCAAAGCCTTTTGTTCGTTCAAAAAATATTTGCTGATGTTAATAAAGAAATAAAAGTAGTTGCTAATACTGAAAAGAAAG CAGAAAAAGCGGGTTATGGTTATAGTAAAAGGATGTAG
Upstream 100 bases:
>100_bases ATCTGATTGGATTGACCCTTACAATTTTTCAAACCAATCGTTTAATAGCGATTAAATATGACTATATACACTACAACAAT AAGATTTTGAAAGGTTGGTA
Downstream 100 bases:
>100_bases GCATAAGAAAACACCATAAAATCGTTCTTAGCTTATTTATAGTATTTTAAAAACTCTATGTTACCCAGTTAGAACAGAGC CTTTTTTAAACTCCTTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MESVKTGKTNKVGKNTEMANTKANKEAHFKQASTITNIIRSIRGIFTKIAKKVRGLVKKHPKKSSAALVVLTHIACKKAK ELDDKVQDKSKQAEKENQINWWKYSGLTIATSLLLAACSTGDVSEQIELEQEKQKTSNIETNNQIKVEQEKQKTSNIETN NQIKVEQEQQKTEQERQKTEQERQKTEQEKQKTIKTQKDFIKYVEQNCQENHNQFFIEKGGIKAGIGIEVEAECKTPKPA KTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIAYLELDPRDFNVTEEWQKENL KIRSKAQAKMLEMRSLKPDSQAHLSTSQSLLFVQKIFADVNKEIKVVANTEKKAEKAGYGYSKRM
Sequences:
>Translated_385_residues MESVKTGKTNKVGKNTEMANTKANKEAHFKQASTITNIIRSIRGIFTKIAKKVRGLVKKHPKKSSAALVVLTHIACKKAK ELDDKVQDKSKQAEKENQINWWKYSGLTIATSLLLAACSTGDVSEQIELEQEKQKTSNIETNNQIKVEQEKQKTSNIETN NQIKVEQEQQKTEQERQKTEQERQKTEQEKQKTIKTQKDFIKYVEQNCQENHNQFFIEKGGIKAGIGIEVEAECKTPKPA KTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIAYLELDPRDFNVTEEWQKENL KIRSKAQAKMLEMRSLKPDSQAHLSTSQSLLFVQKIFADVNKEIKVVANTEKKAEKAGYGYSKRM >Mature_385_residues MESVKTGKTNKVGKNTEMANTKANKEAHFKQASTITNIIRSIRGIFTKIAKKVRGLVKKHPKKSSAALVVLTHIACKKAK ELDDKVQDKSKQAEKENQINWWKYSGLTIATSLLLAACSTGDVSEQIELEQEKQKTSNIETNNQIKVEQEKQKTSNIETN NQIKVEQEQQKTEQERQKTEQERQKTEQEKQKTIKTQKDFIKYVEQNCQENHNQFFIEKGGIKAGIGIEVEAECKTPKPA KTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIAYLELDPRDFNVTEEWQKENL KIRSKAQAKMLEMRSLKPDSQAHLSTSQSLLFVQKIFADVNKEIKVVANTEKKAEKAGYGYSKRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43995; Mature: 43995
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVKTGKTNKVGKNTEMANTKANKEAHFKQASTITNIIRSIRGIFTKIAKKVRGLVKKH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKKSSAALVVLTHIACKKAKELDDKVQDKSKQAEKENQINWWKYSGLTIATSLLLAACST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCC GDVSEQIELEQEKQKTSNIETNNQIKVEQEKQKTSNIETNNQIKVEQEQQKTEQERQKTE CCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH QERQKTEQEKQKTIKTQKDFIKYVEQNCQENHNQFFIEKGGIKAGIGIEVEAECKTPKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCEEEECCCCCCCCC KTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIA CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEE YLELDPRDFNVTEEWQKENLKIRSKAQAKMLEMRSLKPDSQAHLSTSQSLLFVQKIFADV EEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC NKEIKVVANTEKKAEKAGYGYSKRM CCCEEEEECCHHHHHHHCCCHHCCC >Mature Secondary Structure MESVKTGKTNKVGKNTEMANTKANKEAHFKQASTITNIIRSIRGIFTKIAKKVRGLVKKH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKKSSAALVVLTHIACKKAKELDDKVQDKSKQAEKENQINWWKYSGLTIATSLLLAACST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCC GDVSEQIELEQEKQKTSNIETNNQIKVEQEKQKTSNIETNNQIKVEQEQQKTEQERQKTE CCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH QERQKTEQEKQKTIKTQKDFIKYVEQNCQENHNQFFIEKGGIKAGIGIEVEAECKTPKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCEEEECCCCCCCCC KTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIA CCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEE YLELDPRDFNVTEEWQKENLKIRSKAQAKMLEMRSLKPDSQAHLSTSQSLLFVQKIFADV EEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC NKEIKVVANTEKKAEKAGYGYSKRM CCCEEEEECCHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA