| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645692
GI number: 15645692
Start: 1136958
End: 1137644
Strand: Reverse
Name: Not Available
Synonym: HP1078
Alternate gene names: NA
Gene position: 1137644-1136958 (Counterclockwise)
Preceding gene: 15645693
Following gene: 15645691
Centisome position: 68.21
GC content: 27.07
Gene sequence:
>687_bases ATGGCAGATAAAGAAATACTGATTTTTGTAGAAGGTCCAAGCGATAAGGTGTTTTTAGAAGTTTATCTGTATTTTCTAGA AAGATTTCCAATCAAAAACTTTAAAGTGCAAAATGTAGATGGAAAAGATAACCTGTCTAAACGATTGCTTGAAATTGAAA AATACGATAAAACACTTATCATTTTTGATGCGGATAAAGACTATGAGAGTAATAAAAAAGAGATTTTAAAAATTGTATCA GAATCGAAACAAACTATTTCAGAAGAACAAATTTTTTTATTTCCTAATAATCAAGATGATGGCGATTTAGAAACCCTATT ATTAAAGATTGCTAACCACAAAGAGTTCATAAATTGTTTTGAAAGCTATTTGGATTGTATTAAAAAGAAAGAACATTACA AACCGATTAAAAACATAAGAAAAAGTAAGTGGTATGCCTATTTAGAAGCGCTTGGATTAGAAAAATTTTTCCAATACACA TGGGACACAAAGAAAAAGAATAATAAAAAAAAGCTTATCATTGACGATAAAGATGGAGATGAGATTGAGATAAAAGATCA ATATAAAGGAGATTATGAAGAACTAAAAAAAGTTCTTGATCTTAACTCAAAATCTCTTATTCCCCTTAAAAATTTTTTAG GGCAATTTGCAGAAAATAATCAAAAAACAAATCCTAAAATTTTCTAA
Upstream 100 bases:
>100_bases GTTATTCCAAGAACTTATTATGGAGAAAATTTAGAATATTACTTTGAAAATGAAGAGAATCTTTTTGGTTAAAGCACTAT ATTAAGATTAGGATCATTTA
Downstream 100 bases:
>100_bases TTTAACAAAATATATTACAATTACCAAAAAAGTATTATTTTTCTTAAAAGGTGCGCTGTGAAATTGTGGTTTCCTTATTT TTTAGCGATTGTGTTCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILKIVS ESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCFESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYT WDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF
Sequences:
>Translated_228_residues MADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILKIVS ESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCFESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYT WDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF >Mature_227_residues ADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILKIVSE SKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCFESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTW DTKKKNNKKKLIIDDKDGDEIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27122; Mature: 26991
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLI CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEE IFDADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCF EEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHHHH ESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC EIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF EEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLI CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEE IFDADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCF EEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHHHH ESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC EIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF EEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA