| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645689
GI number: 15645689
Start: 1133935
End: 1135251
Strand: Reverse
Name: Not Available
Synonym: HP1075
Alternate gene names: NA
Gene position: 1135251-1133935 (Counterclockwise)
Preceding gene: 15645691
Following gene: 15645680
Centisome position: 68.07
GC content: 39.64
Gene sequence:
>1317_bases ATGAAAAAAATATGGCTTTTAGTGTGGGGCTTGTGTTCTTGGGTGTTTTTGCATGCGATAGAGATGATAGAAAAAGCCCC TACAAATGTAGAGGATAGAGACAAAGCCCCCCATTTGTTGCTTTTAGCAGGGATTCAAGGCGATGAGCCTGGTGGGTTTA ATGCAACTAATTTGTTTTTAATGCATTATAGCGTTTTAAAAGGTTTGGTTGAAGTGGTTCCTGTATTGAATAAGCCTTCC ATGTTAAGAAATCATAGGGGCTTGTATGGGGATATGAACCGCAAATTTGCCGCTTTAGACAAGAATGACCCTGAATACCC CACTATCCAGGAAATCAAATCCTTGATTGCAAAACCCAGTATAGACGCTGTCTTGCATTTGCATGATGGCGGTGGGTATT ACCGCCCTGTTTATGTTGATGCGATGCTCAATCCTAAGCGCTGGGGGAATTGCTTTATTATTGATCAAGATGAGGTTAAA GGGGCGAAATTCCCTAATTTGCTTGCTTTTGCAAACAATACGATTGAGAGTATCAACGCCCATTTATTGCACCCCATTGA AGAGTATCATTTAAAAAACACGCGCACCGCGCAAGGCGATACAGAAATGCAAAAAGCCCTAACTTTTTATGCGATCAACC AAAAAAAGAGCGCTTTTGCCAATGAAGCTAGCAAAGAACTCCCTTTAGCATCAAGGGTGTTTTACCACCTGCAAGCCATT GAGGGCTTACTCAATCAGCTCAATATCCCTTTTAAGCGCGATTTTGATCTTAACCCTAACAGCGTGCATGCCCTAATCAA TGATAAAAACTTGTGGGCAAAAATCAGCTCTTTGCCTAAAATGCCCCTTTTTAACTTGCGCCCTAAACTCAATCATTTCC CCTTACCCCACAACACTAAAATCCCACAAATCCCCATAGAGAGCAACGCTTACATTGTAGGGCTAGTCAAAAATAAACAA GAAGTGTTTTTAAAATACGGCAACAAGCTCATGACACGATTATCGCCTTTTTACATAGAGTTTGATCCTTCTTTAGAAGA AGTGAAAATGCAAATTGACAATAAGGATCAAATGGTTAAAATAGGGAGCGTGGTTGAAGTGAAAGAGAGTTTTTATATCC ATGCTATGGACAATATCCGTGCGAATGTGATTGGCTTTAGCGTTTCTAATGAAAATAAGCCTAATGAAGCGGGTTATACG ATTAAATTTAAAGATTTTCAAAAACGCTTTTCATTGGACAAGCAAGAAAGGATCTATCGCATAGAATTTTATAAAAACAA CGCGTTTAGCGGGATGATCTTAGTGAAATTTGTGTAG
Upstream 100 bases:
>100_bases GCATTTTTCGTTCCTTTTTATGAAAACTTTAAAAAACCCCCTTAAAAAGGTTTTTAGGTATAATTAGCGATCTTTTAGTT TCAAATAGTAGAGAGATGGG
Downstream 100 bases:
>100_bases GAATGGATAAATCTCATTGCCTTTTAACATTCAAGGGTTTTGGTATTTTTTCGCTTTAAACGAATAGGCGTTTTTTAGCT TGATTTATTTCTAGTGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Succinylglutamate Desuccinylase/Aspartoacylase; Purine Nucleoside Phosphorylase; Tat Pathway Signal Sequence Domain Protein; Secreted Protein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKKIWLLVWGLCSWVFLHAIEMIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPS MLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVK GAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAI EGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQ EVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYT IKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV
Sequences:
>Translated_438_residues MKKIWLLVWGLCSWVFLHAIEMIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPS MLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVK GAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAI EGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQ EVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYT IKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV >Mature_438_residues MKKIWLLVWGLCSWVFLHAIEMIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPS MLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVK GAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAI EGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQ EVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYT IKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50234; Mature: 50234
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIWLLVWGLCSWVFLHAIEMIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFL CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH MHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPS HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC IDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINA CEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEHHCCHHHHHHH HLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAI HHCCCHHHHHCCCCCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHH EGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTK HHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC IPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVK CCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHEEECCCCCEEE IGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYR ECCEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHCCCHHHCEEE IEFYKNNAFSGMILVKFV EEEEECCCCCCEEEEEEC >Mature Secondary Structure MKKIWLLVWGLCSWVFLHAIEMIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFL CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHH MHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPS HHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCC IDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINA CEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEHHCCHHHHHHH HLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAI HHCCCHHHHHCCCCCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHH EGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTK HHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC IPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVK CCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHEEECCCCCEEE IGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYR ECCEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHCCCHHHCEEE IEFYKNNAFSGMILVKFV EEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA