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The map label for this gene is fliM

Identifier: 15645645

GI number: 15645645

Start: 1092610

End: 1093674

Strand: Reverse

Name: fliM

Synonym: HP1031

Alternate gene names: 15645645

Gene position: 1093674-1092610 (Counterclockwise)

Preceding gene: 15645646

Following gene: 15645644

Centisome position: 65.57

GC content: 40.85

Gene sequence:

>1065_bases
ATGGCTGATATTTTAAGCCAAGAAGAAATTGATGCGCTTTTAGAAGTCGTTGATGAAAATGTGGATATTCAAAATGTCCA
AAAAAAAGATATTATCCCGCAGCGCAGCGTAACCCTCTATGATTTCAAACGCCCTAATCGTGTGAGTAAGGAGCAACTGC
GCTCTTTTAGGAGTATCCATGACAAAATGGCTAGGAATCTTTCTAGTCAAGTCTCTTCTATCATGCGTTCTATTGTAGAG
ATCCAGCTCCATAGCGTGGATCAAATGACTTATGGCGAATTTTTGATGAGTTTGCCTAGCCCTACAAGTTTTAATGTCTT
TTCCATGAAGCCTATGGGAGGAACGGGGGTTTTAGAGATTAATCCTAGCATCGCTTTCCCTATGATTGACAGACTATTAG
GGGGTAAGGGGAGCGCGTATGATCAAAACAGGGAGTTTAGCGATATTGAATTGAATTTATTGGATACGATTTTACGCCAG
GTGATGCAAATTTTAAAAGAAGTGTGGTCGCCCGTGGTGGAGATGTTTCCTACCATTGACGCTAAAGAATCCAGCGCGAA
TGTGGTCCAAATCGTCGCTCAAAATGAAATTTCTATCATGGTGGTTTTAGAGATTATTATCGGGCATAGCCGTGGGATGA
TGAATATTTGTTACCCGGTGATTTCCATTGAGAGCATTCTTTCTAAAATGGGGAGTAGGGATTTGATGCTTTCAGAAACG
AATTCCAAAAAGAGTCGTAATAAGGAATTGCAAGCGCTATTGAGCGGGGTGAGCGTGGATATGATCGTGTTTTTGGGCGC
GGTGGAATTGAGTTTGAAAGAAATGTTGGATTTAGATGTGGGGGATACTATCCGGTTGAACAAGATCGCTAATGATGAAG
TGAGCGTGTATGTGCATAAAAAAAAGCGTTATTTAGCGAGCGTGGGGTTTCAAGGGTATAGGAAAACCATTCAAATTAAA
GAAGTGATCTATAGCGAAAAAGAACGCACTAAAGAAATTTTAGAAATGCTAGAAGAGCAGCGCAGAGGCAAAGTGGGCGA
TATTATGAAAATAGAAGAAGAGTGA

Upstream 100 bases:

>100_bases
TTGAGCGAGATTAAAGAGATTTTAGGCATTACTGAATCGCGCATTTCTCAAATCATTAAAGAAGTGATTAAAAAGGTGCG
TAAATCCTTAGGAGTGGATC

Downstream 100 bases:

>100_bases
GAAATGCAAGATTTTATTAAGATTTTTATTCAAGAGGTTGTCTCTACTTTAGAAGGGTTAGTGGGTAAGGCTCCAAGCGT
GGGATTAGAAAAAGAAATTT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVE
IQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQ
VMQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHKKKRYLASVGFQGYRKTIQIK
EVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE

Sequences:

>Translated_354_residues
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVE
IQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQ
VMQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHKKKRYLASVGFQGYRKTIQIK
EVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
>Mature_353_residues
ADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVEI
QLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQV
MQILKEVWSPVVEMFPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSETN
SKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHKKKRYLASVGFQGYRKTIQIKE
VIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=292, Percent_Identity=25, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 40171; Mature: 40040

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIH
CCCCCCHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEE
NPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMFPTID
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEH
KKRYLASVGFQGYRKTIQIKEVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure 
ADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIH
CCCCCHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
DKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSMKPMGGTGVLEI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEE
NPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMFPTID
CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDLMLSET
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECC
NSKKSRNKELQALLSGVSVDMIVFLGAVELSLKEMLDLDVGDTIRLNKIANDEVSVYVHK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEH
KKRYLASVGFQGYRKTIQIKEVIYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]