| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645644
GI number: 15645644
Start: 1091743
End: 1092606
Strand: Reverse
Name: Not Available
Synonym: HP1030
Alternate gene names: 15645644
Gene position: 1092606-1091743 (Counterclockwise)
Preceding gene: 15645645
Following gene: 15645643
Centisome position: 65.51
GC content: 38.66
Gene sequence:
>864_bases ATGCAAGATTTTATTAAGATTTTTATTCAAGAGGTTGTCTCTACTTTAGAAGGGTTAGTGGGTAAGGCTCCAAGCGTGGG ATTAGAAAAAGAAATTTCTAGTAGCGACGAATCTTTTTTGAAATTAATCAGCACGCCTTATGCAAGAGTTGTGATAAGCG CGATTGAAAAAGAAGAGAGCTCTATTGAATTACTGGCTCCGGTAGTTTTAGTTACCTCTTTAAGCGATTTGATGCTAGGA GGTGAGGGAGCGAGTAAGGAAGAAATGGATAATGACGATTTAGACGCTTTTAAAGAAATGGCTTCTAATATTTTTGGCGC GATCGCTACAAGCTTGAAGTCTCAAGAATTGCTCCCTAAACTCAATTTCACCACTATAAACGCTGAAATCGCTAAAGAGC TTCCTAAAAAAGAAGATTACGCTAAAGCGATGGTGTTTTCTTTTAAAATGGAAGCCATCAAAGAAAGCCAAATCATTTTA TTGACTACGGCGGCTTTTGAGGGCCAATTTGAAAAAACGCATAAAGAAGAAAAAGAAGAAACGACAGAGGGCGTTGCTGA AGAGGTTAAAACCCATGATGCGTCTTTAGAAAACATAGAAATCCGCAATATCAGCATGCTTTTAGACGTGAAATTGAACG TTAAGGTGCGCATCGGGCAAAAAAAAATGATTTTAAAAGACGTGGTCTCTATGGATATAGGGAGCGTGGTAGAGCTGGAT CAATTGGTGAATGACCCTTTGGAAATTCTTGTAGATGACAAGGTGATCGCTAAGGGCGAAGTGGTGATTGTGGATGGGAA TTTTGGCATTCAAATCACGGATATTGGCACTAAAAAAGAACGCTTAGAACAATTGAAACATTAA
Upstream 100 bases:
>100_bases CTATAGCGAAAAAGAACGCACTAAAGAAATTTTAGAAATGCTAGAAGAGCAGCGCAGAGGCAAAGTGGGCGATATTATGA AAATAGAAGAAGAGTGAGAA
Downstream 100 bases:
>100_bases ATCTTTTTATCATAAAAAGGAAAGGGATATGGCTATTTTTGGGGAATTAAGCTCGCTTGGGCATTTGTTTAAAAAAACGC AAGAATTGGAAATTTTGCAT
Product: flagellar motor switch protein FliY
Products: NA
Alternate protein names: CheY-P phosphatase FliY [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MQDFIKIFIQEVVSTLEGLVGKAPSVGLEKEISSSDESFLKLISTPYARVVISAIEKEESSIELLAPVVLVTSLSDLMLG GEGASKEEMDNDDLDAFKEMASNIFGAIATSLKSQELLPKLNFTTINAEIAKELPKKEDYAKAMVFSFKMEAIKESQIIL LTTAAFEGQFEKTHKEEKEETTEGVAEEVKTHDASLENIEIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELD QLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH
Sequences:
>Translated_287_residues MQDFIKIFIQEVVSTLEGLVGKAPSVGLEKEISSSDESFLKLISTPYARVVISAIEKEESSIELLAPVVLVTSLSDLMLG GEGASKEEMDNDDLDAFKEMASNIFGAIATSLKSQELLPKLNFTTINAEIAKELPKKEDYAKAMVFSFKMEAIKESQIIL LTTAAFEGQFEKTHKEEKEETTEGVAEEVKTHDASLENIEIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELD QLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH >Mature_287_residues MQDFIKIFIQEVVSTLEGLVGKAPSVGLEKEISSSDESFLKLISTPYARVVISAIEKEESSIELLAPVVLVTSLSDLMLG GEGASKEEMDNDDLDAFKEMASNIFGAIATSLKSQELLPKLNFTTINAEIAKELPKKEDYAKAMVFSFKMEAIKESQIIL LTTAAFEGQFEKTHKEEKEETTEGVAEEVKTHDASLENIEIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELD QLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH
Specific function: Component of the flagellar switch. Binds CheY-P and increases its hydrolysis rate in vitro. May function constitutively to remove CheY-P around the flagellar switch to maintain an optimal level of CheY-P whereas CheC may function after addition of an attr
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=The switch is localized at the base of the flagellar motor, in or near the C-ring, attached to the MS-ring (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliN/MopA/SpaO family [H]
Homologues:
Organism=Escherichia coli, GI1788256, Length=125, Percent_Identity=31.2, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007597 - InterPro: IPR012826 - InterPro: IPR001172 - InterPro: IPR001543 [H]
Pfam domain/function: PF04509 CheC; PF01052 SpoA [H]
EC number: NA
Molecular weight: Translated: 31717; Mature: 31717
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDFIKIFIQEVVSTLEGLVGKAPSVGLEKEISSSDESFLKLISTPYARVVISAIEKEES CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCC SIELLAPVVLVTSLSDLMLGGEGASKEEMDNDDLDAFKEMASNIFGAIATSLKSQELLPK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LNFTTINAEIAKELPKKEDYAKAMVFSFKMEAIKESQIILLTTAAFEGQFEKTHKEEKEE CCEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH TTEGVAEEVKTHDASLENIEIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELD HHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEEEECCHHHHHHHHHHHCCCHHHHHH QLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH HHHCCCHHEEECCCEEECCCEEEEECCCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure MQDFIKIFIQEVVSTLEGLVGKAPSVGLEKEISSSDESFLKLISTPYARVVISAIEKEES CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCC SIELLAPVVLVTSLSDLMLGGEGASKEEMDNDDLDAFKEMASNIFGAIATSLKSQELLPK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LNFTTINAEIAKELPKKEDYAKAMVFSFKMEAIKESQIILLTTAAFEGQFEKTHKEEKEE CCEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH TTEGVAEEVKTHDASLENIEIRNISMLLDVKLNVKVRIGQKKMILKDVVSMDIGSVVELD HHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEEEEECCHHHHHHHHHHHCCCHHHHHH QLVNDPLEILVDDKVIAKGEVVIVDGNFGIQITDIGTKKERLEQLKH HHHCCCHHEEECCCEEECCCEEEEECCCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1447979; 9384377; 1898932 [H]