Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15645586

GI number: 15645586

Start: 1031237

End: 1032478

Strand: Reverse

Name: Not Available

Synonym: HP0971

Alternate gene names: NA

Gene position: 1032478-1031237 (Counterclockwise)

Preceding gene: 15645587

Following gene: 15645585

Centisome position: 61.9

GC content: 38.81

Gene sequence:

>1242_bases
ATGAGCATGTTTAGTGCGGGCATGCTTAGTGCTAAAATCTTTACCCTACAAGAGTTTTTTAAAGAAGTAGAAATTAATTC
AATGGAGCTGATCGGCAAAAAAGCCGATTTCAAAAGCCGTTTGAATGAGCAACGCTCCGTGAATGCTTGGGATTTTCCCT
ATATTGAGAATGAAACTTCTATGGTAAAGAACTTCCAAGGCATTATAGAAGCGCAGCCCAGAACCCTTTTAGTGGTAAGA
CCCAAGCTCCCATGGGTGAGTTCGCTTTTATCCAAAAGCCTTTCTATTAAAACCATTCAATACGATAAAAGTTATCAATT
GAATAAAAATCTCGCTTTTATTGGCGCTAAACGCCTTTATTTGACTTATGTGATGACTAAAGAAAAGTATCAGGTGTATG
TGCAACGAGAAGCGAACTTTTATTCGCAGCTCAAAATCGCTAAAGAAAAAGTCAAAGCCGGCAGCATGAGCGAAAAGGAT
TACATCAACTTCAATAATTCTTATTTGGAATCCAAACTCGCTAAAACCAACGTGGAAACCAAACTCATAGATTTAGAAAA
AATGCTAGACACGATGCTAGCGATTGTGGAGCCGGTCAAAGAGGGGGCGCATTTTGACACTTATTTAGACCATTTGCATG
ATGTCAAGGTGATCGGTTTGGATTTTGAATACGTGCGATTAGAACCTGAAGCTTTAAAGTTTAAATTGGATCGCTCGTTG
TATGTGGATATTTTGGATCTAACGGCTAAAGATTATCAGGTGAATGCGAAATTGGCTAATAGAGATGTGTTTAATGCATT
TGAATTCGGGATTGGCTCTGAAAGCTATAACTCTTCAACTAATCTTTCTGTAGAAGTGCGTATCCCTTTGCCGGTAACGC
CTAAAAATATCTATCAAAAGCGTAAATTCTTGGATTTGCAAAGCGGGACGCTCGCGCAAAATGAAGTGATGAAACGAAAC
ATTAGAATCAACGCCAACTCCTACTTAAACCAGCTCAAAACCAAAGAAGCATACATTGAAACCCAAAAAGAAGCCATTGC
CAATAAGAAGCGTTTGATGGAAATGGGGCGCATCGCTTATGAAGCCCAAAAAATCGGGCTTTTTGAATATTTGATTTATC
AAAATTCTTACATGGACGCTCTTATTACTCTAGCGGAAGCCAAGATTGAATACATTGATATTAGCGCGCTTTTAGAAGAG
ACTTTAGGGGAGAGTTTGACCAGATTAGGAGAATTGCATTGA

Upstream 100 bases:

>100_bases
GTGTATCAAAGTTTCTTAGAAATTGGGGATATTAAAGAAATTGCGATTTAGTGGCTTCAAACGCAAAGTCTGGCGTTTTT
GTTTGGGGGTAACTTTTTTA

Downstream 100 bases:

>100_bases
AGCGGGCGTTATTGTGGCTTATGTTAATGGGCGTTTTTTCAATGGGTGTTTCTTTAAAAGCCAAAGAGTATTCAGAAATT
ATTTTAGAAGAAAAAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cadmium-Zinc-Nickel Outer Membrane Efflux Protein CznC

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETSMVKNFQGIIEAQPRTLLVVR
PKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKD
YINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL
YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRN
IRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEE
TLGESLTRLGELH

Sequences:

>Translated_413_residues
MSMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETSMVKNFQGIIEAQPRTLLVVR
PKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKD
YINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL
YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRN
IRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEE
TLGESLTRLGELH
>Mature_412_residues
SMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETSMVKNFQGIIEAQPRTLLVVRP
KLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDY
INFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSLY
VDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRNI
RINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEET
LGESLTRLGELH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47711; Mature: 47579

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETS
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCHHCCCCCCCCCCCCCHHH
MVKNFQGIIEAQPRTLLVVRPKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLY
HHHHHHHHEECCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCEECCCCEEEEEHHEEE
LTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVET
EEEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCHH
KLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECEEEEEECHHHHEEEECCCE
YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQK
EEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
RKFLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAY
HHHEECCCCCCHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEETLGESLTRLGELH
HHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETS
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCHHCCCCCCCCCCCCCHHH
MVKNFQGIIEAQPRTLLVVRPKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLY
HHHHHHHHEECCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCEECCCCEEEEEHHEEE
LTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVET
EEEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCHH
KLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECEEEEEECHHHHEEEECCCE
YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQK
EEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
RKFLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAY
HHHEECCCCCCHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEETLGESLTRLGELH
HHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA