| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645586
GI number: 15645586
Start: 1031237
End: 1032478
Strand: Reverse
Name: Not Available
Synonym: HP0971
Alternate gene names: NA
Gene position: 1032478-1031237 (Counterclockwise)
Preceding gene: 15645587
Following gene: 15645585
Centisome position: 61.9
GC content: 38.81
Gene sequence:
>1242_bases ATGAGCATGTTTAGTGCGGGCATGCTTAGTGCTAAAATCTTTACCCTACAAGAGTTTTTTAAAGAAGTAGAAATTAATTC AATGGAGCTGATCGGCAAAAAAGCCGATTTCAAAAGCCGTTTGAATGAGCAACGCTCCGTGAATGCTTGGGATTTTCCCT ATATTGAGAATGAAACTTCTATGGTAAAGAACTTCCAAGGCATTATAGAAGCGCAGCCCAGAACCCTTTTAGTGGTAAGA CCCAAGCTCCCATGGGTGAGTTCGCTTTTATCCAAAAGCCTTTCTATTAAAACCATTCAATACGATAAAAGTTATCAATT GAATAAAAATCTCGCTTTTATTGGCGCTAAACGCCTTTATTTGACTTATGTGATGACTAAAGAAAAGTATCAGGTGTATG TGCAACGAGAAGCGAACTTTTATTCGCAGCTCAAAATCGCTAAAGAAAAAGTCAAAGCCGGCAGCATGAGCGAAAAGGAT TACATCAACTTCAATAATTCTTATTTGGAATCCAAACTCGCTAAAACCAACGTGGAAACCAAACTCATAGATTTAGAAAA AATGCTAGACACGATGCTAGCGATTGTGGAGCCGGTCAAAGAGGGGGCGCATTTTGACACTTATTTAGACCATTTGCATG ATGTCAAGGTGATCGGTTTGGATTTTGAATACGTGCGATTAGAACCTGAAGCTTTAAAGTTTAAATTGGATCGCTCGTTG TATGTGGATATTTTGGATCTAACGGCTAAAGATTATCAGGTGAATGCGAAATTGGCTAATAGAGATGTGTTTAATGCATT TGAATTCGGGATTGGCTCTGAAAGCTATAACTCTTCAACTAATCTTTCTGTAGAAGTGCGTATCCCTTTGCCGGTAACGC CTAAAAATATCTATCAAAAGCGTAAATTCTTGGATTTGCAAAGCGGGACGCTCGCGCAAAATGAAGTGATGAAACGAAAC ATTAGAATCAACGCCAACTCCTACTTAAACCAGCTCAAAACCAAAGAAGCATACATTGAAACCCAAAAAGAAGCCATTGC CAATAAGAAGCGTTTGATGGAAATGGGGCGCATCGCTTATGAAGCCCAAAAAATCGGGCTTTTTGAATATTTGATTTATC AAAATTCTTACATGGACGCTCTTATTACTCTAGCGGAAGCCAAGATTGAATACATTGATATTAGCGCGCTTTTAGAAGAG ACTTTAGGGGAGAGTTTGACCAGATTAGGAGAATTGCATTGA
Upstream 100 bases:
>100_bases GTGTATCAAAGTTTCTTAGAAATTGGGGATATTAAAGAAATTGCGATTTAGTGGCTTCAAACGCAAAGTCTGGCGTTTTT GTTTGGGGGTAACTTTTTTA
Downstream 100 bases:
>100_bases AGCGGGCGTTATTGTGGCTTATGTTAATGGGCGTTTTTTCAATGGGTGTTTCTTTAAAAGCCAAAGAGTATTCAGAAATT ATTTTAGAAGAAAAAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Cadmium-Zinc-Nickel Outer Membrane Efflux Protein CznC
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETSMVKNFQGIIEAQPRTLLVVR PKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKD YINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRN IRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEE TLGESLTRLGELH
Sequences:
>Translated_413_residues MSMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETSMVKNFQGIIEAQPRTLLVVR PKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKD YINFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRN IRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEE TLGESLTRLGELH >Mature_412_residues SMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETSMVKNFQGIIEAQPRTLLVVRP KLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLYLTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDY INFNNSYLESKLAKTNVETKLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSLY VDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQKRKFLDLQSGTLAQNEVMKRNI RINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAYEAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEET LGESLTRLGELH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47711; Mature: 47579
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETS CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCHHCCCCCCCCCCCCCHHH MVKNFQGIIEAQPRTLLVVRPKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLY HHHHHHHHEECCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCEECCCCEEEEEHHEEE LTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVET EEEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCHH KLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECEEEEEECHHHHEEEECCCE YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQK EEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH RKFLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAY HHHEECCCCCCHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEETLGESLTRLGELH HHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SMFSAGMLSAKIFTLQEFFKEVEINSMELIGKKADFKSRLNEQRSVNAWDFPYIENETS CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHCHHCCCCCCCCCCCCCHHH MVKNFQGIIEAQPRTLLVVRPKLPWVSSLLSKSLSIKTIQYDKSYQLNKNLAFIGAKRLY HHHHHHHHEECCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCEECCCCEEEEEHHEEE LTYVMTKEKYQVYVQREANFYSQLKIAKEKVKAGSMSEKDYINFNNSYLESKLAKTNVET EEEEEECCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCHH KLIDLEKMLDTMLAIVEPVKEGAHFDTYLDHLHDVKVIGLDFEYVRLEPEALKFKLDRSL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECEEEEEECHHHHEEEECCCE YVDILDLTAKDYQVNAKLANRDVFNAFEFGIGSESYNSSTNLSVEVRIPLPVTPKNIYQK EEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH RKFLDLQSGTLAQNEVMKRNIRINANSYLNQLKTKEAYIETQKEAIANKKRLMEMGRIAY HHHEECCCCCCHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAQKIGLFEYLIYQNSYMDALITLAEAKIEYIDISALLEETLGESLTRLGELH HHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA