| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645477
GI number: 15645477
Start: 910909
End: 912294
Strand: Reverse
Name: Not Available
Synonym: HP0858
Alternate gene names: 15645477
Gene position: 912294-910909 (Counterclockwise)
Preceding gene: 15645478
Following gene: 15645476
Centisome position: 54.7
GC content: 41.49
Gene sequence:
>1386_bases ATGAAAAAAATCTTAGTCATAGGCGATCTGATCGCTGATTATTATTTGTGGGGGAAGAGCGAACGGCTTTCGCCTGAAGC CCCTGTGCCTGTTTTAGAAGTCCAGAGGGAGAGTAAGAATTTAGGCGGAGCGGCTAATGTGGCTAATAACCTCATTTCTT TAAAAGCTAAAGTTTTTTTATGTGGGGTCGTGGGCGATGATTTAGAGGGCGAGCATTTCATTAGCGCTTTAAAAGCAAGA GGGATTGACGCTTCAGGTATTTTGATAGATAAAACCCGTTGCACCACGCTTAAAACGCGCATCATCGCGCAAAACCAGCA AATCGCGCGCGTGGATAAGGAAATCAAAGACCCCTTAAACGCTGATTTAAGAAAAAAACTTTTAGATTTTTTCACAGAAA AAATCCAAGAAATAGATGGCGTTATCCTTTCAGATTACAATAAGGGCGTGTTGGATTTTGAACTCACTCAAGCAATGATC GCTCTAGCCAACCAACACCACAAGCTCATTTTATGCGACCCTAAAGGGAAAGATTATAGCAAATATTCCCATGCGAGTTT GATCACGCCTAATCGCACCGAATTAGAGCATGCGCTCCATTTGAAATTAGACAGCCATGCGAATTTATCAAAAGCGCTCC AAATCTTAAAAGAAACTTATCATATCGCTATGCCTTTAGTAACTTTGAGTGAACAAGGCATCGCTTTTTTAGAAAAAGGC GAGTTAGTCAATTGCCCCACTATCGCTAAAGAAGTTTATGATGTAACTGGGGCAGGCGATACGGTGATCGCGTCTTTAAC GCTCTCTTTATTAGAATCAATGAGCCTAAAAGATGCTTGCGAGTTTGCCAATGCGGCGGCGGCTGTGGTGGTGGGTAAAA TGGGGAGCGCGTTAGCGAGTTTAGAAGAAATCGCTTTGATTTTGAACCAAACGCACCCTAAAATCCTTTCTTTAGAAAAG CTGTTAGAAACTTTAGATCAGCAAAAAATCATTTTCACCAATGGCTGTTTTGACCTCCTCCATAAAGGGCATGCGAGCTA TTTGCAAAAGGCTAAAGCTTTAGGGGATATTCTCATTGTGGGGTTAAATAGCGACGCTTCCATCAAAAGGCTTAAGGGGG ATAAACGCCCCATAGTGAGCGAAAAAGACAGAGCGTTTCTTTTAGCGAGTTTGTCTTGCGTGGATTATGTCGTGGTGTTT GAAGAAGACACGCCAATCAAATTAATTCAAGCCCTAAAGCCTGATATTTTAGTCAAGGGAGCGGATTATCTTAATAAAGA AGTCATAGGGAGCGAGTTTGCTAAAGAAACCCATTTGATGGAGTTTGAAGAAGGTTATTCCACAAGTGCTATCATAGAAA AAATTAAAAGGACATGCAATGATTGA
Upstream 100 bases:
>100_bases CTGCTATTTTGGATTTGGATTACACCCCTTTATACGATTTGGAAAGCGGCATTAAAGATTATTTGCCCCATATCCATGCG ATTTTTAAAGGACAGTGCGC
Downstream 100 bases:
>100_bases TAATTTAATTAAAAAAGAATTTTTAGCCCATAAGGAAGCGTTAGAAAAAAGTTTAGAGGGTTTGCAAGAAGCGTTAAAAC AAAGCGTTCATCTTTTGATA
Product: ADP-heptose synthase (rfaE)
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVQRESKNLGGAANVANNLISLKAKVFLCGVVGDDLEGEHFISALKAR GIDASGILIDKTRCTTLKTRIIAQNQQIARVDKEIKDPLNADLRKKLLDFFTEKIQEIDGVILSDYNKGVLDFELTQAMI ALANQHHKLILCDPKGKDYSKYSHASLITPNRTELEHALHLKLDSHANLSKALQILKETYHIAMPLVTLSEQGIAFLEKG ELVNCPTIAKEVYDVTGAGDTVIASLTLSLLESMSLKDACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILSLEK LLETLDQQKIIFTNGCFDLLHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVF EEDTPIKLIQALKPDILVKGADYLNKEVIGSEFAKETHLMEFEEGYSTSAIIEKIKRTCND
Sequences:
>Translated_461_residues MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVQRESKNLGGAANVANNLISLKAKVFLCGVVGDDLEGEHFISALKAR GIDASGILIDKTRCTTLKTRIIAQNQQIARVDKEIKDPLNADLRKKLLDFFTEKIQEIDGVILSDYNKGVLDFELTQAMI ALANQHHKLILCDPKGKDYSKYSHASLITPNRTELEHALHLKLDSHANLSKALQILKETYHIAMPLVTLSEQGIAFLEKG ELVNCPTIAKEVYDVTGAGDTVIASLTLSLLESMSLKDACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILSLEK LLETLDQQKIIFTNGCFDLLHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVF EEDTPIKLIQALKPDILVKGADYLNKEVIGSEFAKETHLMEFEEGYSTSAIIEKIKRTCND >Mature_461_residues MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVQRESKNLGGAANVANNLISLKAKVFLCGVVGDDLEGEHFISALKAR GIDASGILIDKTRCTTLKTRIIAQNQQIARVDKEIKDPLNADLRKKLLDFFTEKIQEIDGVILSDYNKGVLDFELTQAMI ALANQHHKLILCDPKGKDYSKYSHASLITPNRTELEHALHLKLDSHANLSKALQILKETYHIAMPLVTLSEQGIAFLEKG ELVNCPTIAKEVYDVTGAGDTVIASLTLSLLESMSLKDACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILSLEK LLETLDQQKIIFTNGCFDLLHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVF EEDTPIKLIQALKPDILVKGADYLNKEVIGSEFAKETHLMEFEEGYSTSAIIEKIKRTCND
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=471, Percent_Identity=40.552016985138, Blast_Score=320, Evalue=1e-88, Organism=Drosophila melanogaster, GI45550975, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI45550974, Length=199, Percent_Identity=26.6331658291457, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.-
Molecular weight: Translated: 50689; Mature: 50689
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVQRESKNLGGAANVANNLISLKAKVFL CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEE CGVVGDDLEGEHFISALKARGIDASGILIDKTRCTTLKTRIIAQNQQIARVDKEIKDPLN EEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCC ADLRKKLLDFFTEKIQEIDGVILSDYNKGVLDFELTQAMIALANQHHKLILCDPKGKDYS HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC KYSHASLITPNRTELEHALHLKLDSHANLSKALQILKETYHIAMPLVTLSEQGIAFLEKG CCCCCEECCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEECC ELVNCPTIAKEVYDVTGAGDTVIASLTLSLLESMSLKDACEFANAAAAVVVGKMGSALAS CEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LEEIALILNQTHPKILSLEKLLETLDQQKIIFTNGCFDLLHKGHASYLQKAKALGDILIV HHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEE GLNSDASIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVFEEDTPIKLIQALKPDILVKG EECCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHEEEEEEECCCCCHHHHHHCCCCEEEEC ADYLNKEVIGSEFAKETHLMEFEEGYSTSAIIEKIKRTCND HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVQRESKNLGGAANVANNLISLKAKVFL CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEE CGVVGDDLEGEHFISALKARGIDASGILIDKTRCTTLKTRIIAQNQQIARVDKEIKDPLN EEECCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHCCCC ADLRKKLLDFFTEKIQEIDGVILSDYNKGVLDFELTQAMIALANQHHKLILCDPKGKDYS HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC KYSHASLITPNRTELEHALHLKLDSHANLSKALQILKETYHIAMPLVTLSEQGIAFLEKG CCCCCEECCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEECC ELVNCPTIAKEVYDVTGAGDTVIASLTLSLLESMSLKDACEFANAAAAVVVGKMGSALAS CEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LEEIALILNQTHPKILSLEKLLETLDQQKIIFTNGCFDLLHKGHASYLQKAKALGDILIV HHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEE GLNSDASIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVFEEDTPIKLIQALKPDILVKG EECCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHEEEEEEECCCCCHHHHHHCCCCEEEEC ADYLNKEVIGSEFAKETHLMEFEEGYSTSAIIEKIKRTCND HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA