| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15645424
GI number: 15645424
Start: 859421
End: 860275
Strand: Reverse
Name: Not Available
Synonym: HP0805
Alternate gene names: NA
Gene position: 860275-859421 (Counterclockwise)
Preceding gene: 15645426
Following gene: 15645423
Centisome position: 51.58
GC content: 37.66
Gene sequence:
>855_bases ATGCGTGTTTTTATTATTCATTTAAGCCCAAAAACCTGTCAAAATTTTTCTTTAAAAGAAACTCATATAACCCCCCTTTT AGAGAGCCTTAAACTTCAAGGGATCTCTTATGAAATTTTTGATGCGATCTATTCTAAAATCTCTCCCACTCAATTACACC CCTTGATTTTAGAGCATTTGCACCCTTCTTTTATGGTTGAAGATTTATGGGCTTTTTGTAAGAATAAAAAACACCCCCCT TGCGCGTTAAAAAATTTCTTTTACGCGATCAAGCATTGCGGGAAGAGGATGGGGTTTGGGGAGCTTGGGTGCTATGCGAG CCATTATTCCTTGTGGCAAAAATGCATAGAACTCAATGAAGCGATCTGTATTTTAGAAGATGATATTATTATAAAAGATC GTTTTAAAGAGAGCCTAGAGTTTTGCCGCCACCACATCAACGAATTAGGCTATATCCGTTTGATGCATTTAGAAGAAAAT GTGGCTAAGCAAAAGACTCCCGTTAAAGGGGTTTCTCAAATCTTAAATTTTAAAGATGGCATTGGCACTCAAGGGTATGT TTTAGCTCCCAAAGCCGCGCAAAAATTGTTGAAATACAGCGCGAAAGAATGGGTGATGCCCATAGATTGCGTGATGGATA GGCATTATTGGCATGGGGTCAAAAACTATGTGTTAGAAGAATTTGCGATCGCTTGCGACGGGATGAACGCTCAAAATTCC AACACAGAAAAACAAAGGCCTAAAAAATTACCTTTAAGCATTAGGATTGGCCGTTCTTTGCATAAAAGCACCATTAAATT TTTGGATAAAGTTTTTAGGTATAGCCCAAAATTAATCAGAATTGGCAAACATTAG
Upstream 100 bases:
>100_bases TAGGAATATCATCTAACATGATGCGTATTTTACTAAAATTTGCGCTAGAATGTAAGTCTGTTTGATATTGATTTTATTTG CATTAAGAATTAAGGCTAAC
Downstream 100 bases:
>100_bases AATAAGTCTTTGAGCATTTCTTGCATGATAGGGGGAGTTTCATTCAATTAATTTAGAGGCTTTAGCGATTTGTATCTAAA TAAAGCAATAAAGTAATAAT
Product: lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B)
Products: NA
Alternate protein names: Beta-1 4-Galactosyltransferase; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase; Lex2B Protein; Pbeta-1 4-Galactosyltransferase; 50S Ribosomal Protein L; Glycosyl Transferase Family; LPS Glycosyltransferase Subfamily Protein; Lipooligosaccharide 5G8 Epitope Biosynthesis-Protein; Glycosyltransferase WavM; Lipooligosaccharide Biosynthesis Glycosyltransferase; Lob1 Protein; Glycosyl Transferase
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHLHPSFMVEDLWAFCKNKKHPP CALKNFFYAIKHCGKRMGFGELGCYASHYSLWQKCIELNEAICILEDDIIIKDRFKESLEFCRHHINELGYIRLMHLEEN VAKQKTPVKGVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFAIACDGMNAQNS NTEKQRPKKLPLSIRIGRSLHKSTIKFLDKVFRYSPKLIRIGKH
Sequences:
>Translated_284_residues MRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHLHPSFMVEDLWAFCKNKKHPP CALKNFFYAIKHCGKRMGFGELGCYASHYSLWQKCIELNEAICILEDDIIIKDRFKESLEFCRHHINELGYIRLMHLEEN VAKQKTPVKGVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFAIACDGMNAQNS NTEKQRPKKLPLSIRIGRSLHKSTIKFLDKVFRYSPKLIRIGKH >Mature_284_residues MRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHLHPSFMVEDLWAFCKNKKHPP CALKNFFYAIKHCGKRMGFGELGCYASHYSLWQKCIELNEAICILEDDIIIKDRFKESLEFCRHHINELGYIRLMHLEEN VAKQKTPVKGVSQILNFKDGIGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFAIACDGMNAQNS NTEKQRPKKLPLSIRIGRSLHKSTIKFLDKVFRYSPKLIRIGKH
Specific function: Unknown
COG id: COG3306
COG function: function code M; Glycosyltransferase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32973; Mature: 32973
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHL CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHC HPSFMVEDLWAFCKNKKHPPCALKNFFYAIKHCGKRMGFGELGCYASHYSLWQKCIELNE CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC AICILEDDIIIKDRFKESLEFCRHHINELGYIRLMHLEENVAKQKTPVKGVSQILNFKDG EEEEEECCEEEHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCC IGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFAIACDGMNAQNS CCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NTEKQRPKKLPLSIRIGRSLHKSTIKFLDKVFRYSPKLIRIGKH CCHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure MRVFIIHLSPKTCQNFSLKETHITPLLESLKLQGISYEIFDAIYSKISPTQLHPLILEHL CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHC HPSFMVEDLWAFCKNKKHPPCALKNFFYAIKHCGKRMGFGELGCYASHYSLWQKCIELNE CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC AICILEDDIIIKDRFKESLEFCRHHINELGYIRLMHLEENVAKQKTPVKGVSQILNFKDG EEEEEECCEEEHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHCCCHHHHHHHHHHHCC IGTQGYVLAPKAAQKLLKYSAKEWVMPIDCVMDRHYWHGVKNYVLEEFAIACDGMNAQNS CCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NTEKQRPKKLPLSIRIGRSLHKSTIKFLDKVFRYSPKLIRIGKH CCHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA