| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644986
GI number: 15644986
Start: 367903
End: 369438
Strand: Reverse
Name: Not Available
Synonym: HP0358
Alternate gene names: NA
Gene position: 369438-367903 (Counterclockwise)
Preceding gene: 15644989
Following gene: 15644985
Centisome position: 22.15
GC content: 37.17
Gene sequence:
>1536_bases ATGAAAAAACTTCTTTATACCATACTCGCGCTTCTTTTAATCGGCCTTTTAACAATCTATCTCATCCTTTTTACAGAATG GGGGAATAAGATCATCGCTTCGTATATAGAGAAAAAAATCAACCCGAACGAGCACTACTTGAGCGTTAAAACCTTTAAAT TGAGATTCAACTCTTTGGATTTTAAAGCTCAAGCCAACGATGATTCCACGCTCATTCTTAAGGGGGATTTTTCACTTTTA AAGCAAAGCGTAAATTTGAATTACCATATAGATATTAAAGATTTACGCTCTTTCAAAGAATGGATACCCTACCCTTTAAG GGGGGCTGTTATCACTTCTGGGAATATTAAAGGGCATAGAAAAGCCCTTATGATTCAAGGCGTCTCTAATGTGGCTCAAT CCCACACTGCCTACAATGCCCTTTTAGATGATTTCAAGCTTTCTCGCTTAAATTTGAACGCACAAGACGCCAATTTAGAA GATTTGCTTTATTTAATCAATCGCCCCGCTTATGCGAACGCAAAAGTGTCCTTACAGGCGGATTTTAACTCTCTAAAGCC TTTAGAGGGGCATTTGATCCTAACAGCTAATAACGCTTTAATCAATAACGCCCTAATCAATCAAATTTTTCATTTAAACC TTAAAGACACGCTTGTTTTCAGCCTCTCGCATTCAAGCGACTTTAAAGGAAACAAAGCCATCAGCGATACCACCCTGACT AGCCCTTTAGCCAATTTCAAAGCCCTAAAAAGCGAATACCTTTTCTCTATTTTAAAACTCAACGCCCCCTACACTTTAGA AATCCCCAATCTAGCCAAACTCTATAACATTACCAACCACCCCTTAAAAGGGAGCTTGACTTTAAAAGGCGCTATAGAAC AAAGCCCCAAACTTTTAAAAGTCAGCGGCCATTCAAATTTACTAGACGGCGCGCTGGATTTCACGCTTTTAAATAAAGAT TTGAAAGGGCGTTTTTCCAATATTTCCACTTTAAAAGCTTTAGATTTATTCCATTACCCTAAGTTTTTCCAATCCGTTGC AGACGCTAATTTGGATTATGATCTTATCGCTAAGCAAGGCGTATTGAAAGCCCGCCTAAAAAACGCAAGATTCCTCAAAA ATGCATTCAGCGATTTTCTCTACTCCATTTCTAAATTTGATATTACAAAAGAAATTTATAACGATGCCAATCTGGTAAGC CAAATCAACCAGCAACGCCTGCTCTCTGATCTGAGTTTAAAAAGCCCCAAAACCCAATTGAAAATCCATAACGGTTTGTT GGATTTAAACACCAAACAAATGAACATGCTCATGGATGCGGAAATTTTAAAATTCATTTTTAAAATGAAACTTCAAGGCA ACATGCACCAGCCAAAATTTTCTCTCATTTTAAACGAAAAAGCCATTCAGCAAAACTTGCAACAAGGCTTGAAAGAAATC TTAAAAAACGACACCCTTAAAAAAGGTTTAGATCATTTGCTTAAAGATGATAAGCTCAAAGAAAAGCTTGAAAAAGGGCT TAAGGGGCTTTTTTAA
Upstream 100 bases:
>100_bases AATTTTTATTACCGCTCGTTAAGGCTTTATAAAAAATGTTAGAAACCCTTACAAAACAAGCTAATATATTCTATTCAATT TGCCTCAAGGACAAACAAAC
Downstream 100 bases:
>100_bases AATTTTAAAGGATAGAAATGGCGCACATTTTAGTTAGCGGGGCGACTTCAGGGTTTGGATTAGAAATCGCTAAAGCGTTT TTACAAAAAAACCATGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKKLLYTILALLLIGLLTIYLILFTEWGNKIIASYIEKKINPNEHYLSVKTFKLRFNSLDFKAQANDDSTLILKGDFSLL KQSVNLNYHIDIKDLRSFKEWIPYPLRGAVITSGNIKGHRKALMIQGVSNVAQSHTAYNALLDDFKLSRLNLNAQDANLE DLLYLINRPAYANAKVSLQADFNSLKPLEGHLILTANNALINNALINQIFHLNLKDTLVFSLSHSSDFKGNKAISDTTLT SPLANFKALKSEYLFSILKLNAPYTLEIPNLAKLYNITNHPLKGSLTLKGAIEQSPKLLKVSGHSNLLDGALDFTLLNKD LKGRFSNISTLKALDLFHYPKFFQSVADANLDYDLIAKQGVLKARLKNARFLKNAFSDFLYSISKFDITKEIYNDANLVS QINQQRLLSDLSLKSPKTQLKIHNGLLDLNTKQMNMLMDAEILKFIFKMKLQGNMHQPKFSLILNEKAIQQNLQQGLKEI LKNDTLKKGLDHLLKDDKLKEKLEKGLKGLF
Sequences:
>Translated_511_residues MKKLLYTILALLLIGLLTIYLILFTEWGNKIIASYIEKKINPNEHYLSVKTFKLRFNSLDFKAQANDDSTLILKGDFSLL KQSVNLNYHIDIKDLRSFKEWIPYPLRGAVITSGNIKGHRKALMIQGVSNVAQSHTAYNALLDDFKLSRLNLNAQDANLE DLLYLINRPAYANAKVSLQADFNSLKPLEGHLILTANNALINNALINQIFHLNLKDTLVFSLSHSSDFKGNKAISDTTLT SPLANFKALKSEYLFSILKLNAPYTLEIPNLAKLYNITNHPLKGSLTLKGAIEQSPKLLKVSGHSNLLDGALDFTLLNKD LKGRFSNISTLKALDLFHYPKFFQSVADANLDYDLIAKQGVLKARLKNARFLKNAFSDFLYSISKFDITKEIYNDANLVS QINQQRLLSDLSLKSPKTQLKIHNGLLDLNTKQMNMLMDAEILKFIFKMKLQGNMHQPKFSLILNEKAIQQNLQQGLKEI LKNDTLKKGLDHLLKDDKLKEKLEKGLKGLF >Mature_511_residues MKKLLYTILALLLIGLLTIYLILFTEWGNKIIASYIEKKINPNEHYLSVKTFKLRFNSLDFKAQANDDSTLILKGDFSLL KQSVNLNYHIDIKDLRSFKEWIPYPLRGAVITSGNIKGHRKALMIQGVSNVAQSHTAYNALLDDFKLSRLNLNAQDANLE DLLYLINRPAYANAKVSLQADFNSLKPLEGHLILTANNALINNALINQIFHLNLKDTLVFSLSHSSDFKGNKAISDTTLT SPLANFKALKSEYLFSILKLNAPYTLEIPNLAKLYNITNHPLKGSLTLKGAIEQSPKLLKVSGHSNLLDGALDFTLLNKD LKGRFSNISTLKALDLFHYPKFFQSVADANLDYDLIAKQGVLKARLKNARFLKNAFSDFLYSISKFDITKEIYNDANLVS QINQQRLLSDLSLKSPKTQLKIHNGLLDLNTKQMNMLMDAEILKFIFKMKLQGNMHQPKFSLILNEKAIQQNLQQGLKEI LKNDTLKKGLDHLLKDDKLKEKLEKGLKGLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57847; Mature: 57847
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLYTILALLLIGLLTIYLILFTEWGNKIIASYIEKKINPNEHYLSVKTFKLRFNSLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCC FKAQANDDSTLILKGDFSLLKQSVNLNYHIDIKDLRSFKEWIPYPLRGAVITSGNIKGHR EEEECCCCCEEEEECCHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCH KALMIQGVSNVAQSHTAYNALLDDFKLSRLNLNAQDANLEDLLYLINRPAYANAKVSLQA HEEEEECHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEE DFNSLKPLEGHLILTANNALINNALINQIFHLNLKDTLVFSLSHSSDFKGNKAISDTTLT CCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHH SPLANFKALKSEYLFSILKLNAPYTLEIPNLAKLYNITNHPLKGSLTLKGAIEQSPKLLK HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCEEEEECCCCCCCEEE VSGHSNLLDGALDFTLLNKDLKGRFSNISTLKALDLFHYPKFFQSVADANLDYDLIAKQG ECCCCCHHHHHHHHHEECHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VLKARLKNARFLKNAFSDFLYSISKFDITKEIYNDANLVSQINQQRLLSDLSLKSPKTQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE KIHNGLLDLNTKQMNMLMDAEILKFIFKMKLQGNMHQPKFSLILNEKAIQQNLQQGLKEI EEECCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH LKNDTLKKGLDHLLKDDKLKEKLEKGLKGLF HHCCHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKKLLYTILALLLIGLLTIYLILFTEWGNKIIASYIEKKINPNEHYLSVKTFKLRFNSLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCC FKAQANDDSTLILKGDFSLLKQSVNLNYHIDIKDLRSFKEWIPYPLRGAVITSGNIKGHR EEEECCCCCEEEEECCHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCH KALMIQGVSNVAQSHTAYNALLDDFKLSRLNLNAQDANLEDLLYLINRPAYANAKVSLQA HEEEEECHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEE DFNSLKPLEGHLILTANNALINNALINQIFHLNLKDTLVFSLSHSSDFKGNKAISDTTLT CCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHH SPLANFKALKSEYLFSILKLNAPYTLEIPNLAKLYNITNHPLKGSLTLKGAIEQSPKLLK HHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCEEEEECCCCCCCEEE VSGHSNLLDGALDFTLLNKDLKGRFSNISTLKALDLFHYPKFFQSVADANLDYDLIAKQG ECCCCCHHHHHHHHHEECHHHHCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VLKARLKNARFLKNAFSDFLYSISKFDITKEIYNDANLVSQINQQRLLSDLSLKSPKTQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE KIHNGLLDLNTKQMNMLMDAEILKFIFKMKLQGNMHQPKFSLILNEKAIQQNLQQGLKEI EEECCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHH LKNDTLKKGLDHLLKDDKLKEKLEKGLKGLF HHCCHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA