| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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The map label for this gene is flgL
Identifier: 15644923
GI number: 15644923
Start: 312145
End: 314631
Strand: Reverse
Name: flgL
Synonym: HP0295
Alternate gene names: 15644923
Gene position: 314631-312145 (Counterclockwise)
Preceding gene: 15644941
Following gene: 15644909
Centisome position: 18.86
GC content: 40.05
Gene sequence:
>2487_bases ATGCGCGTTACCTTTGGCTCAAAATACAACCAAATGAATAACTACCAAAACGCTTTACAAAATAAAATCAACGACGCTAA CACGCAGATCGCTTCAGGGCTAAAAATCCGTTATGGTTATCAAAACAGCGACATTAACAACCAGAATTTAAAATTCCAAT ACGAAGAAAACACCTTAGATCAAGGCATTGATGTGGCGCAAAACGCTTACACTTCAACGCTCAATACCGACAAAGCCTTG CAAGAATTTTCTAAAACGATGGAGGCGTTTAAAACCAAACTCATCCAATCCGCTAACGATGTGCATTCAGAAACTTCTCG CGCCGCTATCGCTAACGATTTAGAACGCTTAAAAGAGCATATGATAAATGTCGCTAACACTTCTATAGGGGGGGAATTTT TATTTGGGGGCAGTAAGGTGGATAGACCCCCCATTGATAGTAATGGGAAATACCATGGCAATGGCGAAGATTTAAACGTG CTTATTAGCTCTGATAACCTTGTGCCTTATAATATCAGCGGGCAAGATTTGTTTTTAGGCACCGATAAAGACAAACACAA ACTCATTACCACCAACATTAAATTATTCAATCAAAACAAGCTCCACCCTGATGTGATGGACGCTTTAGAGCATTCTTCAT TGCCTGAGGAAGTTTTTATTAAACCCAGCGATACCTTGCGAGAACTCATCGGCGATAACGATAAAGACCCCACCAATGAC CCTAAAGAGTTTTTTTATTTGCAAGGCGTTAGGCCTGATGGCTCCAGTTTTAAAGAAAAATTCGCGTTGGATAAAGCCTA TCAAAACCAAGAGAGTGCCTCTAAAGTGAGCGATTTGTTGGATAAAATCGCTCACGCTTACGGGAACACTTCGCAAAATA AAGTCGTGGATGTGAGTTTGAACAATTGGGGGCAAATTGAGATCAAAAACCTAACCCCCGGCAGTGAAAATTTGGATTTT CATTTGATTTCTAGCGATGGGGATTTTGACGATTTAGACGCCTTGCGTTCGAGCGGTAAAAGGGTTACTGAATACATCAA AAGTGCGTTTGTAACGGATAGGAGTTTGAGCCAAGTTAAAGCGGTGCCTAACATGTATAATCCCAAGGTGCTTGAAGTCC CTAGCGTGTTTGTCACTAAAGACAATGTTTTAGCCAACAAAAACACTAAATTGAGCGAGATTTTTGGCGATAGCGTGGAA ACTTTAAAAATCAATGCCAGCCGTTTGGACGAAACAAGCGCTATTAAAATCCCAAACCTCCCTGTTTATTTGGACATTCC CATTCTTTTAGACGTGAAAAATTCTACGATTAAAGATTTGAAAGACGCGATCAAAAAACGCTTCAATAATGAAGTGGATG TGGAAATTGAAACAAACGGGCGTTTGAGGATTATTGACAATTCTTCTAAAGAATCGCCTATTTCTTTGGCTTTAAGCGCC CTAGATGCTAAAGGACTAGAAGTGGCCGGTATCCCTACTAATAACGCGAGCGAATACCAAAAAACCTACTTCAATAAAGA AGGGGCAAAATTAGAAAGCAATGTCGCTCAAACCGCTCAAAATGGCGCAGCTAATGGCTCTACTAAACTGAGTGAAGCCG CTAAGGGGAGTTTAGAAAATAGCGTTTTTAACATGAAATTAAACGATGTGAATGGCTTATTTTTGGAAGCGCAAATGAAC TTGGATAATAATGGGGCTTTTTTGAGCCTCCCTAATGGCATTAAAATCCCGCTTTATGACCCCACAAGCGCTGATATTCA AGCGTCTAAACCCAATGAAGTCACTTACAGGCAACTTATGGATGCGATGAGTATCGCGCTCAATTACAGCAATACTGACC CAGCCATCTACCAACAAATCAGCGATAACCCCACTTCCAAAGAAAGCAAGGAGCGCTTTATTGGATTGTTAAAACAAGCT AAAGACAACCTTTCTGTTAATTTGAATGAAGAGGGAAAAGTCATTATCCAAGATAACATGCATTCCAACACCAAAATGCA GTTCATGCTTTTTGATAAAGACGCGAATGATTTTTCTCAAAACGCCTTGCACAGCGACAAACCAAGCCTTAAATTAAACG CTAATAACGCTCTCATTATTGACAAGCCCAGCGTGAATTTTTTTGATCAATTAGAAAATACCATCACTTCTGTAAGAAAA GGGATTTATCGCCCGGACGCTTTAGGGGATACTTATTCTAGCGATATGCGTAATTTAGGCATTCAAAACGGCATCACCCT TATAGATCACTTGAGCGATCACATAGAAAAAATGATCGCTAAAAACGGTGCTCATGGCAAGGCGTTTGAGAACATTATCA GGCGTAATGAAGTTTTAAAAACGCAAGTTCAAAGCATTCGTGGGGAAACGACCGGCACGGATATGGCAGAAACTTACAAC AAATTTTCCAATCTCACTAACAACTATAACGCTGTTTTGGCTTCCACGAACAAAATCAATAATTTGTCTTTAACGAAATA CTTGTAA
Upstream 100 bases:
>100_bases ATTAACCCGCATTGTCCCACTCAAACCACTCGCAATTGTTATTAAGCTTATTTTGGAATACTTTTAGCTTGTTTGTTAAA AAACCAATAAGGATTTGATC
Downstream 100 bases:
>100_bases TCTTTTGGTGGTTTTTAAGCGTTCTAAAAAGAGATATTAAAAAGAGATATTAAAATGGCTTTTAAGCTTCTATGAAGCCC CCCCCCCTCCTCCTTTTGCC
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MRVTFGSKYNQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNTDKAL QEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMINVANTSIGGEFLFGGSKVDRPPIDSNGKYHGNGEDLNV LISSDNLVPYNISGQDLFLGTDKDKHKLITTNIKLFNQNKLHPDVMDALEHSSLPEEVFIKPSDTLRELIGDNDKDPTND PKEFFYLQGVRPDGSSFKEKFALDKAYQNQESASKVSDLLDKIAHAYGNTSQNKVVDVSLNNWGQIEIKNLTPGSENLDF HLISSDGDFDDLDALRSSGKRVTEYIKSAFVTDRSLSQVKAVPNMYNPKVLEVPSVFVTKDNVLANKNTKLSEIFGDSVE TLKINASRLDETSAIKIPNLPVYLDIPILLDVKNSTIKDLKDAIKKRFNNEVDVEIETNGRLRIIDNSSKESPISLALSA LDAKGLEVAGIPTNNASEYQKTYFNKEGAKLESNVAQTAQNGAANGSTKLSEAAKGSLENSVFNMKLNDVNGLFLEAQMN LDNNGAFLSLPNGIKIPLYDPTSADIQASKPNEVTYRQLMDAMSIALNYSNTDPAIYQQISDNPTSKESKERFIGLLKQA KDNLSVNLNEEGKVIIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLENTITSVRK GIYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYN KFSNLTNNYNAVLASTNKINNLSLTKYL
Sequences:
>Translated_828_residues MRVTFGSKYNQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNTDKAL QEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMINVANTSIGGEFLFGGSKVDRPPIDSNGKYHGNGEDLNV LISSDNLVPYNISGQDLFLGTDKDKHKLITTNIKLFNQNKLHPDVMDALEHSSLPEEVFIKPSDTLRELIGDNDKDPTND PKEFFYLQGVRPDGSSFKEKFALDKAYQNQESASKVSDLLDKIAHAYGNTSQNKVVDVSLNNWGQIEIKNLTPGSENLDF HLISSDGDFDDLDALRSSGKRVTEYIKSAFVTDRSLSQVKAVPNMYNPKVLEVPSVFVTKDNVLANKNTKLSEIFGDSVE TLKINASRLDETSAIKIPNLPVYLDIPILLDVKNSTIKDLKDAIKKRFNNEVDVEIETNGRLRIIDNSSKESPISLALSA LDAKGLEVAGIPTNNASEYQKTYFNKEGAKLESNVAQTAQNGAANGSTKLSEAAKGSLENSVFNMKLNDVNGLFLEAQMN LDNNGAFLSLPNGIKIPLYDPTSADIQASKPNEVTYRQLMDAMSIALNYSNTDPAIYQQISDNPTSKESKERFIGLLKQA KDNLSVNLNEEGKVIIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLENTITSVRK GIYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYN KFSNLTNNYNAVLASTNKINNLSLTKYL >Mature_828_residues MRVTFGSKYNQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLDQGIDVAQNAYTSTLNTDKAL QEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEHMINVANTSIGGEFLFGGSKVDRPPIDSNGKYHGNGEDLNV LISSDNLVPYNISGQDLFLGTDKDKHKLITTNIKLFNQNKLHPDVMDALEHSSLPEEVFIKPSDTLRELIGDNDKDPTND PKEFFYLQGVRPDGSSFKEKFALDKAYQNQESASKVSDLLDKIAHAYGNTSQNKVVDVSLNNWGQIEIKNLTPGSENLDF HLISSDGDFDDLDALRSSGKRVTEYIKSAFVTDRSLSQVKAVPNMYNPKVLEVPSVFVTKDNVLANKNTKLSEIFGDSVE TLKINASRLDETSAIKIPNLPVYLDIPILLDVKNSTIKDLKDAIKKRFNNEVDVEIETNGRLRIIDNSSKESPISLALSA LDAKGLEVAGIPTNNASEYQKTYFNKEGAKLESNVAQTAQNGAANGSTKLSEAAKGSLENSVFNMKLNDVNGLFLEAQMN LDNNGAFLSLPNGIKIPLYDPTSADIQASKPNEVTYRQLMDAMSIALNYSNTDPAIYQQISDNPTSKESKERFIGLLKQA KDNLSVNLNEEGKVIIQDNMHSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLENTITSVRK GIYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLKTQVQSIRGETTGTDMAETYN KFSNLTNNYNAVLASTNKINNLSLTKYL
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 91998; Mature: 91998
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTFGSKYNQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLD CEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCHH QGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEH HCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MINVANTSIGGEFLFGGSKVDRPPIDSNGKYHGNGEDLNVLISSDNLVPYNISGQDLFLG HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEE TDKDKHKLITTNIKLFNQNKLHPDVMDALEHSSLPEEVFIKPSDTLRELIGDNDKDPTND CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHEEECCHHHHHHHHCCCCCCCCCC PKEFFYLQGVRPDGSSFKEKFALDKAYQNQESASKVSDLLDKIAHAYGNTSQNKVVDVSL CCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE NNWGQIEIKNLTPGSENLDFHLISSDGDFDDLDALRSSGKRVTEYIKSAFVTDRSLSQVK CCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH AVPNMYNPKVLEVPSVFVTKDNVLANKNTKLSEIFGDSVETLKINASRLDETSAIKIPNL HCCCCCCCEEEECCEEEEECCCEEECCCCHHHHHHCCCCEEEEEEHHHCCCCCEEECCCC PVYLDIPILLDVKNSTIKDLKDAIKKRFNNEVDVEIETNGRLRIIDNSSKESPISLALSA CEEEECEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHH LDAKGLEVAGIPTNNASEYQKTYFNKEGAKLESNVAQTAQNGAANGSTKLSEAAKGSLEN HCCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC SVFNMKLNDVNGLFLEAQMNLDNNGAFLSLPNGIKIPLYDPTSADIQASKPNEVTYRQLM CEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCEEEEECCCCCCEECCCCCCHHHHHHH DAMSIALNYSNTDPAIYQQISDNPTSKESKERFIGLLKQAKDNLSVNLNEEGKVIIQDNM HHHHHEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCC HSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLENTITSVRK CCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHH GIYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLK CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TQVQSIRGETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC >Mature Secondary Structure MRVTFGSKYNQMNNYQNALQNKINDANTQIASGLKIRYGYQNSDINNQNLKFQYEENTLD CEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCHH QGIDVAQNAYTSTLNTDKALQEFSKTMEAFKTKLIQSANDVHSETSRAAIANDLERLKEH HCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MINVANTSIGGEFLFGGSKVDRPPIDSNGKYHGNGEDLNVLISSDNLVPYNISGQDLFLG HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEE TDKDKHKLITTNIKLFNQNKLHPDVMDALEHSSLPEEVFIKPSDTLRELIGDNDKDPTND CCCCCCEEEEEEEEEECCCCCCHHHHHHHHHCCCCHHEEECCHHHHHHHHCCCCCCCCCC PKEFFYLQGVRPDGSSFKEKFALDKAYQNQESASKVSDLLDKIAHAYGNTSQNKVVDVSL CCCEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE NNWGQIEIKNLTPGSENLDFHLISSDGDFDDLDALRSSGKRVTEYIKSAFVTDRSLSQVK CCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH AVPNMYNPKVLEVPSVFVTKDNVLANKNTKLSEIFGDSVETLKINASRLDETSAIKIPNL HCCCCCCCEEEECCEEEEECCCEEECCCCHHHHHHCCCCEEEEEEHHHCCCCCEEECCCC PVYLDIPILLDVKNSTIKDLKDAIKKRFNNEVDVEIETNGRLRIIDNSSKESPISLALSA CEEEECEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHH LDAKGLEVAGIPTNNASEYQKTYFNKEGAKLESNVAQTAQNGAANGSTKLSEAAKGSLEN HCCCCCEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC SVFNMKLNDVNGLFLEAQMNLDNNGAFLSLPNGIKIPLYDPTSADIQASKPNEVTYRQLM CEEEEEECCCCCEEEEEEECCCCCCCEEECCCCCEEEEECCCCCCEECCCCCCHHHHHHH DAMSIALNYSNTDPAIYQQISDNPTSKESKERFIGLLKQAKDNLSVNLNEEGKVIIQDNM HHHHHEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECCC HSNTKMQFMLFDKDANDFSQNALHSDKPSLKLNANNALIIDKPSVNFFDQLENTITSVRK CCCCEEEEEEEECCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHH GIYRPDALGDTYSSDMRNLGIQNGITLIDHLSDHIEKMIAKNGAHGKAFENIIRRNEVLK CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TQVQSIRGETTGTDMAETYNKFSNLTNNYNAVLASTNKINNLSLTKYL HHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]