| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644819
GI number: 15644819
Start: 195596
End: 197104
Strand: Reverse
Name: Not Available
Synonym: HP0190
Alternate gene names: 15644819
Gene position: 197104-195596 (Counterclockwise)
Preceding gene: 15644820
Following gene: 15644817
Centisome position: 11.82
GC content: 38.44
Gene sequence:
>1509_bases TTGAAAATCTTTTTAGTCTTTTTAAGCGTCTTTTTTTTTAATGGGTGTTTTGGGTTAGTCTATAAGACTCCCATTTCAAG CTCTCCTATCTCTTATGATCCCTACACTACCCCCATTGGGAGCTTGTATGCTGAAAAATTAAAAGAAAACCCTAACCATA GCGCGGCCATTCTTTTAGAAGATGGCTTTGACGCTCTGTTGCATAGAGTGGGACTTATTAGAATGAGCCAAAAAAGCATT GACATGCAAACTTATATCTATAAAAACGACCTTTCTTCTCAAGTGATTGCTAAAGAACTTTTAAATGCGGCCAATCGTGG GGTAAAAGTGCGCATCCTTTTAGACGATAACGGATTGGATTCGGATTTTTCAGATATTATGCTCTTAAATTTCCATAAAA ACATTGAGGTGAAAATTTTTAACCCCTACTATATCCGCAATAAAGGCTTGCGTTATTTTGAAATGCTTGCGGATTATGAG CGCATTAAAAAACGCATGCACAACAAGCTTTTCATCGTGGATAATTTCGCTGTCATTATAGGGGGGCGCAATATTGGGGA CAATTATTTTGATAACGATTTAGACACGAATTTTTTAGATTTAGACGCTTTGTTTTTTGGGGGGGTTGCTTCAAAAGCCA AAGAAAGCTTTGAACGCTATTGGAGATTCCACCGCTCTATCCCTGTTTCATTACTAAGAACCCATAAAAGACTCAAAAAC AACGCTAAAGAAATCGCTAAACTCCATGAAAAAATCCCTATCAGCGCTGAAGACAAAAACCAGTTTGAAAAAAAAGTCAA TGATTTTATAGATCGTTTCCAAAAATACCAATACCCCATTTATTATGGGAATGCCATTTTTTTAGCCGATTCACCCAAAA AAATTGACACGCCCTTGTATTCGCCTATCAAAATCGCTTTTGAGAAAGCCCTTAAAAACGCTAAGGACTCCGTTTTTATC GCTTCATCGTATTTTATTCCAGGCAAAAAGATGATGAAAATCTTTAAAAATCAAATTTCTAAGGGGATTGAATTGAACAT CCTTACCAATTCCCTTTCATCTACTGATGCGATAGTGGTCTATGGGGCATGGGAAAGGTATCGCAACCAATTAGTGCGAA TGGGCGCGAATGTCTATGAAATACGAAACGATTTTTTCAACCGCCAGATTAAAGGGCGCTTTAGCACCAAACATTCCTTG CATGGCAAGACGATTGTTTTTGATGACAATTTAACGCTTCTAGGGAGTTTCAATATTGATCCGCGCTCTGCATACATCAA CACTGAAAGCGCGGTTTTGTTTGACAACCCGTCTTTTGCTAAAAGGGTGCGTTTGTCGCTTAAAGATCATGCCCAACAAT CATGGCATTTGGTGGTGTATCGGCATAGAGTGATTTGGGAAGCGGTGGAAGAAGGCATTTTAATCCATGAAAAAACTTCG CCTGACACTTCCTTCTTTTTGCGCTTGATTAAAGAATGGTCTAAAGTCCTTCCTGAAAGAGAGCTTTAA
Upstream 100 bases:
>100_bases TTGCCCTAAAGAATTACCCTTGCAAAGCAGTATCGCCACTTTGCGTAACAGGATGTTGAAAGTGGGTAAAAGCCGCTAAT TTCTTTTTAGTGGGTCGTTT
Downstream 100 bases:
>100_bases AACTTTTAATGCGCTTTATTTTGCGAAAAAGCGATGTTATTGGTAACGGCGGCTAAAAGCGCTGAACACACAAACACCAA ATGGATCACCACTTGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLDSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS PDTSFFLRLIKEWSKVLPEREL
Sequences:
>Translated_502_residues MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLDSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS PDTSFFLRLIKEWSKVLPEREL >Mature_502_residues MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLEDGFDALLHRVGLIRMSQKSI DMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLDSDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYE RIKKRMHNKLFIVDNFAVIIGGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLYSPIKIAFEKALKNAKDSVFI ASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVVYGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSL HGKTIVFDDNLTLLGSFNIDPRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS PDTSFFLRLIKEWSKVLPEREL
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI87081826, Length=472, Percent_Identity=32.2033898305085, Blast_Score=218, Evalue=5e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58288; Mature: 58288
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLE CCHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLD CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE GGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN ECCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLY HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCC SPIKIAFEKALKNAKDSVFIASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVV CHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHGKTIVFDDNLTLLGSFNID EECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCC PRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS CCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECCC PDTSFFLRLIKEWSKVLPEREL CCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIFLVFLSVFFFNGCFGLVYKTPISSSPISYDPYTTPIGSLYAEKLKENPNHSAAILLE CCHHHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE DGFDALLHRVGLIRMSQKSIDMQTYIYKNDLSSQVIAKELLNAANRGVKVRILLDDNGLD CCHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC SDFSDIMLLNFHKNIEVKIFNPYYIRNKGLRYFEMLADYERIKKRMHNKLFIVDNFAVII CCCCCEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECEEEEE GGRNIGDNYFDNDLDTNFLDLDALFFGGVASKAKESFERYWRFHRSIPVSLLRTHKRLKN ECCCCCCCCCCCCCCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NAKEIAKLHEKIPISAEDKNQFEKKVNDFIDRFQKYQYPIYYGNAIFLADSPKKIDTPLY HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCC SPIKIAFEKALKNAKDSVFIASSYFIPGKKMMKIFKNQISKGIELNILTNSLSSTDAIVV CHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEE YGAWERYRNQLVRMGANVYEIRNDFFNRQIKGRFSTKHSLHGKTIVFDDNLTLLGSFNID EECHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCC PRSAYINTESAVLFDNPSFAKRVRLSLKDHAQQSWHLVVYRHRVIWEAVEEGILIHEKTS CCCEEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHCCEEEEECCC PDTSFFLRLIKEWSKVLPEREL CCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]