Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644727

GI number: 15644727

Start: 101643

End: 102356

Strand: Reverse

Name: Not Available

Synonym: HP0097

Alternate gene names: NA

Gene position: 102356-101643 (Counterclockwise)

Preceding gene: 15644728

Following gene: 15644725

Centisome position: 6.14

GC content: 42.02

Gene sequence:

>714_bases
ATGAAAAAAATCGTTTTAGTAGCGATAGCCTTATTGATGAGCGCTTGCGCGAGCTATAAGATCACGCCTGAACATGTTAC
TTCCTATAATAATGGGATTCAAGTGATGACTTCCACGCAAGCCAAATCTAAAGTCCAGCTAGAAATCGCTCAAAGCAAGT
TGAAAGGCTTGAACGAGTCCCCCTTAGTGCTGTATGTAGCGGCGCAAGTTATAGAGGGAAGTCCTGTGGTGTTTAGCCGT
AAAGCCATTTCAGTGTCTATCAACCAAACGAATTTACCGGTCTTAAGCCTGAGACAGGTGATGAAATCCAGTTTTGATTT
TGAGGGTATTTTACAAAGTTTTAATATCGCCGTGCCGACCACCCCTATTGATAATGTCAATATGATCACCCCGCCTATGT
TTTATTACGGGCAAGGGGGATTTTTAGCTTATAACGGCATGATGTATGGGGGAATGGGCATGTATGGGCCAGGCTTTGGC
ATGATGATGATGGATGATGTAGAAGAGCAAGAAGTCATGCAAGAAAGCCGCCAAGCTTTAAAAATCCTAGCGATCAATTA
CCTTAAAAACAACACCCTTAATGTTGAGAGTAAGGCTAAGGGAGGGTTTGTGGTGGTGGATACCAAAAACCTTAAAACCC
CGGGTGTGGTGGTGGTTAAAGTCTTTTTAGAAGATGAAATCCACACCTTTAAAATTGATATTTCTAAGATGTAA

Upstream 100 bases:

>100_bases
TTTTTAAGCCCTTATTCCTAATAAAATCTTAATTTTAAGTCAAACTACACTATAATAAGGAAATTCTAAACGAAAATTAA
ACTGAATGAAAGGAGTTTGA

Downstream 100 bases:

>100_bases
TCGCCCCCTTTAATAAAAGCCTTTGGGCCATCCACCTAAAGGTTTTTTCTTAATTTGGCTAAAAATGATTAAACCTTACG
CCATTTTTTAGATTTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKKIVLVAIALLMSACASYKITPEHVTSYNNGIQVMTSTQAKSKVQLEIAQSKLKGLNESPLVLYVAAQVIEGSPVVFSR
KAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNIAVPTTPIDNVNMITPPMFYYGQGGFLAYNGMMYGGMGMYGPGFG
MMMMDDVEEQEVMQESRQALKILAINYLKNNTLNVESKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM

Sequences:

>Translated_237_residues
MKKIVLVAIALLMSACASYKITPEHVTSYNNGIQVMTSTQAKSKVQLEIAQSKLKGLNESPLVLYVAAQVIEGSPVVFSR
KAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNIAVPTTPIDNVNMITPPMFYYGQGGFLAYNGMMYGGMGMYGPGFG
MMMMDDVEEQEVMQESRQALKILAINYLKNNTLNVESKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM
>Mature_237_residues
MKKIVLVAIALLMSACASYKITPEHVTSYNNGIQVMTSTQAKSKVQLEIAQSKLKGLNESPLVLYVAAQVIEGSPVVFSR
KAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNIAVPTTPIDNVNMITPPMFYYGQGGFLAYNGMMYGGMGMYGPGFG
MMMMDDVEEQEVMQESRQALKILAINYLKNNTLNVESKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26069; Mature: 26069

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVLVAIALLMSACASYKITPEHVTSYNNGIQVMTSTQAKSKVQLEIAQSKLKGLNES
CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCEEHHEEHHHHHCCCCCC
PLVLYVAAQVIEGSPVVFSRKAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNIAVPT
CEEEEEEEEHHCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCEEECC
TPIDNVNMITPPMFYYGQGGFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQAL
CCCCCCCCCCCCEEEECCCCEEEECCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
KILAINYLKNNTLNVESKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM
HHHEEEECCCCEECEECCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEECC
>Mature Secondary Structure
MKKIVLVAIALLMSACASYKITPEHVTSYNNGIQVMTSTQAKSKVQLEIAQSKLKGLNES
CCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCEEHHEEHHHHHCCCCCC
PLVLYVAAQVIEGSPVVFSRKAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNIAVPT
CEEEEEEEEHHCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCEEECC
TPIDNVNMITPPMFYYGQGGFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQAL
CCCCCCCCCCCCEEEECCCCEEEECCEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
KILAINYLKNNTLNVESKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM
HHHEEEECCCCEECEECCCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA