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Identifier: 15618942

GI number: 15618942

Start: 1187729

End: 1188517

Strand: Reverse

Name: Not Available

Synonym: CPn1034

Alternate gene names: NA

Gene position: 1188517-1187729 (Counterclockwise)

Preceding gene: 15618943

Following gene: 15618941

Centisome position: 96.61

GC content: 42.46

Gene sequence:

>789_bases
ATGAAAACCTGGTTGTTCTTCACTTTCTTATTCTCCTGCTCGTCGTTCTATGCTTCTTGTCGTTATGCCGAGGTCAGGTC
CATTCATGAAGTTGCTGGTGATATCCTCTATGATGAAGAGAACTTCTGGCTGATCTTAGATCTTGATGATACGCTTCTTC
AAGGAGGAGAGGCTCTCTCTCATTCTATATGGAAAAGCAAAGCAATCCAGGGGTTACAGAAACAGGGAACCCCAGAACAA
GAAGCTTGGGAGGCTGTAGTTCCTTTCTGGATTGAAATTCAAGAAATGGGAACCGTTCAGCCTATAGAATCTGCTATTTT
TCTACTCATTGAGAAAATCCAGAAGCAAGGAAAGACAACCTTTGTCTACACGGAACGTCCTAAAACAGCTAAAGATCTTA
CCCTAAAGCAACTTCATATGCTCAACGTCTCCTTAGAAGATACTGCTCCACAACCTCAAGCTCCCCTACCCAAGAACCTT
CTCTACACATCGGGAATTCTTTTTTCTGGAGACTACCACAAAGGACCGGGACTCGATCTCTTCTTGGAAATATGCACCCC
CTTACCCGCTAAGATTATCTATATTGATAACCAAAAAGAAAATGTCCTTCGCATCGGTGATCTATGCCAAAAATATGGAA
TTGCTTATTTCGGAATCACCTATAAAGCTCAGGAACTTCACCCCCCGATCTATTTTGATAACATTGCACAAGTACAGTAC
AACTACTCTAAAAAATTACTCAGCAATGAAGCGGCGGCTCTTCTTCTGCGCCACCAAATGCACGAATAA

Upstream 100 bases:

>100_bases
TCTTGTGACTCTTTCCGAAACTATGTAAAAAACTTCATGGCAAAAGTATAAAAAATACTTGTCTTACTCTATCCTTGTCC
AAAAGATTGCAAGGTACGTT

Downstream 100 bases:

>100_bases
TCCTTCTTAAAGATAAGCACTCCCTGACGTTTACTTTTGTGGGTTCTCGATCTCAATAAAAAATAATTTTAGAATAATAA
GAAAAAAGACTACTCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKTWLFFTFLFSCSSFYASCRYAEVRSIHEVAGDILYDEENFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQ
EAWEAVVPFWIEIQEMGTVQPIESAIFLLIEKIQKQGKTTFVYTERPKTAKDLTLKQLHMLNVSLEDTAPQPQAPLPKNL
LYTSGILFSGDYHKGPGLDLFLEICTPLPAKIIYIDNQKENVLRIGDLCQKYGIAYFGITYKAQELHPPIYFDNIAQVQY
NYSKKLLSNEAAALLLRHQMHE

Sequences:

>Translated_262_residues
MKTWLFFTFLFSCSSFYASCRYAEVRSIHEVAGDILYDEENFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQ
EAWEAVVPFWIEIQEMGTVQPIESAIFLLIEKIQKQGKTTFVYTERPKTAKDLTLKQLHMLNVSLEDTAPQPQAPLPKNL
LYTSGILFSGDYHKGPGLDLFLEICTPLPAKIIYIDNQKENVLRIGDLCQKYGIAYFGITYKAQELHPPIYFDNIAQVQY
NYSKKLLSNEAAALLLRHQMHE
>Mature_262_residues
MKTWLFFTFLFSCSSFYASCRYAEVRSIHEVAGDILYDEENFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQ
EAWEAVVPFWIEIQEMGTVQPIESAIFLLIEKIQKQGKTTFVYTERPKTAKDLTLKQLHMLNVSLEDTAPQPQAPLPKNL
LYTSGILFSGDYHKGPGLDLFLEICTPLPAKIIYIDNQKENVLRIGDLCQKYGIAYFGITYKAQELHPPIYFDNIAQVQY
NYSKKLLSNEAAALLLRHQMHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMPY_CHLPN (Q9Z6M5)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   F72003
- PIR:   G86619
- RefSeq:   NP_225228.1
- RefSeq:   NP_301089.1
- RefSeq:   NP_445357.1
- RefSeq:   NP_877346.1
- GeneID:   1467753
- GeneID:   894766
- GeneID:   919808
- GeneID:   962772
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0818
- KEGG:   cpj:CPj1034
- KEGG:   cpn:CPn1034
- KEGG:   cpt:CpB1074
- TIGR:   CP_0818
- HOGENOM:   HBG414054
- OMA:   AGDILYD
- ProtClustDB:   CLSK871337
- BioCyc:   CPNE115711:CP_0818-MONOMER
- BioCyc:   CPNE115713:CPN1034-MONOMER
- BioCyc:   CPNE138677:CPJ1034-MONOMER
- BioCyc:   CPNE182082:CPB1074-MONOMER
- InterPro:   IPR022565

Pfam domain/function: PF11019 DUF2608

EC number: NA

Molecular weight: Translated: 30001; Mature: 30001

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTWLFFTFLFSCSSFYASCRYAEVRSIHEVAGDILYDEENFWLILDLDDTLLQGGEALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHHCCHHHH
HSIWKSKAIQGLQKQGTPEQEAWEAVVPFWIEIQEMGTVQPIESAIFLLIEKIQKQGKTT
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE
FVYTERPKTAKDLTLKQLHMLNVSLEDTAPQPQAPLPKNLLYTSGILFSGDYHKGPGLDL
EEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCHHH
FLEICTPLPAKIIYIDNQKENVLRIGDLCQKYGIAYFGITYKAQELHPPIYFDNIAQVQY
HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEEHHHCCCCEEECCHHHEEE
NYSKKLLSNEAAALLLRHQMHE
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTWLFFTFLFSCSSFYASCRYAEVRSIHEVAGDILYDEENFWLILDLDDTLLQGGEALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCHHHHHCCHHHH
HSIWKSKAIQGLQKQGTPEQEAWEAVVPFWIEIQEMGTVQPIESAIFLLIEKIQKQGKTT
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE
FVYTERPKTAKDLTLKQLHMLNVSLEDTAPQPQAPLPKNLLYTSGILFSGDYHKGPGLDL
EEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCHHH
FLEICTPLPAKIIYIDNQKENVLRIGDLCQKYGIAYFGITYKAQELHPPIYFDNIAQVQY
HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEEEHHHCCCCEEECCHHHEEE
NYSKKLLSNEAAALLLRHQMHE
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362