| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618927
GI number: 15618927
Start: 1170635
End: 1172128
Strand: Reverse
Name: Not Available
Synonym: CPn1019
Alternate gene names: NA
Gene position: 1172128-1170635 (Counterclockwise)
Preceding gene: 15618928
Following gene: 15618922
Centisome position: 95.28
GC content: 43.04
Gene sequence:
>1494_bases ATGACTGTATCTTACCAATCCATATCGACTCCTCCTCCTGAAGGAGAGTTTGATATTTTTGTAGATGGAAATGCCACTGA AGAAGCTGTTGTTGCTGCAGAAGTACAAGTAGCTCTCCCTGCAGGAGAGCAATATGCGATGCTGAGAGCAACTTCCGAGC TATGTTTTGGGATTTTAACACAATCGGAATGTGCTTTGACACAAGCACTGCCTCCCAAGGAAAAACCATTACAAGAAGAG CAATTTCTAGTAAAAAATGGCATATTAATGCGATCAACATCTCTGCCGAACCTAAAACCAGGACAATCGCAGCAGACTAG CTTAGCTTCACATAGAAATCCCTTAGCGCAGCAATCCACATCTTCGAATTCCACAGGGAAAGCATCAACAGAAACAACCT CGTCTTCCTTTCCGTTTTTCTCATGCAAAGCTCCTGAAGGAGACTCCAGTGTGGACAAAACGTTCACAGTGTCTGTCCAA ACACCAAAAGCACAAGAGCAACAAGAAGCAAGCGCTTCTCAAAGCCAAGCACAATTTCATGTAAGGTCCTATTCTAGCAG CACCATAAAAGAACATAGTGCTAAAGAAAAAGTCTCACAAAGCACCAAGTCGGCAGAGACACAAAAACACACACAAACTA AGTCTGATGCGACTCTTAGTCCGATGTCACTCTATAGCACCTTACATAAGGAAGTACCTCAAGCACTATCCTCTACAAAA AGCCAACAAAAAGATGAAGAACATCGAGATCAAAGGCAACAAGAAGGATACGAGCAAGAACAAGAGCAAGAAGAAGGCAA GAAAAAGACACCATGGTGCACTGTGGAATCTCTACAACAGACTTCAAGTTCGAACCAGGTGTACGAGTCTTATACTCCTA TTATTCCTGATCCTATTGTGGAGTTTGCTTTGTCTGAATCACAGCTAAGCGTGCTTGCAGGAAAGCGTGTGACCAACCTT GATGTCCTTAGAATATGTACAGAGCTAATGAAGTTGATGCTCAAAAGTAGAGCTAACGACACAATGACACGTCTTGAAGA AAGAGAGCTCATGGAAAGGGAAGCTCATGAATTGGCGGCGAGTTATTCACGTCAAGCTAAATACGCCCGCTGGCTAGGGA TCGCGACAGCAACGTTAGGTATTTTAGGAGCGATTGCTCCTATGGTTGGAGAAATTTCCGGAGATAGCATTTTAGGGTTT GTCCAAAGGATTTCTGGAAGATTCAAAGATGCGACTGCGAAAACCTTCTTTAAAGGAATAGGAAAAGTTTTCACCTCTCT ATCACAACTTACTGAAGCCGCTTCTAAAGTACATGAGTTATCAGAGAGTGCTGTACGAGCTGTTGCTGAGTACAGAAAAG AAGTCTTCAGAATGAGACAGGATGAAGTCACACGTACCATTGAGGAAGTCAAAGACAACTGGAAAAGTATGGACAATTTC CTTCTGAACATTCTCCAAACAGAACATGACGCTGCTCGCAGTCTGTATCAGTAG
Upstream 100 bases:
>100_bases GAGTTCTTTCGAAGCCCTTTCAAGAATCTTAAATTACATGCGTGAACTAGATCAAGTGTATCTCCACTCCTTAAGAGGAT AAATCCACAGAAGAAATATT
Downstream 100 bases:
>100_bases AATTAAGAGCCTTTTCGAATATTTTTATATGCTATTGTCTTTCCCCAAGGGAAGCGCACCGAGCAGCTCTTTTCAGTAAA GAAACATTCCTTCCCCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MTVSYQSISTPPPEGEFDIFVDGNATEEAVVAAEVQVALPAGEQYAMLRATSELCFGILTQSECALTQALPPKEKPLQEE QFLVKNGILMRSTSLPNLKPGQSQQTSLASHRNPLAQQSTSSNSTGKASTETTSSSFPFFSCKAPEGDSSVDKTFTVSVQ TPKAQEQQEASASQSQAQFHVRSYSSSTIKEHSAKEKVSQSTKSAETQKHTQTKSDATLSPMSLYSTLHKEVPQALSSTK SQQKDEEHRDQRQQEGYEQEQEQEEGKKKTPWCTVESLQQTSSSNQVYESYTPIIPDPIVEFALSESQLSVLAGKRVTNL DVLRICTELMKLMLKSRANDTMTRLEERELMEREAHELAASYSRQAKYARWLGIATATLGILGAIAPMVGEISGDSILGF VQRISGRFKDATAKTFFKGIGKVFTSLSQLTEAASKVHELSESAVRAVAEYRKEVFRMRQDEVTRTIEEVKDNWKSMDNF LLNILQTEHDAARSLYQ
Sequences:
>Translated_497_residues MTVSYQSISTPPPEGEFDIFVDGNATEEAVVAAEVQVALPAGEQYAMLRATSELCFGILTQSECALTQALPPKEKPLQEE QFLVKNGILMRSTSLPNLKPGQSQQTSLASHRNPLAQQSTSSNSTGKASTETTSSSFPFFSCKAPEGDSSVDKTFTVSVQ TPKAQEQQEASASQSQAQFHVRSYSSSTIKEHSAKEKVSQSTKSAETQKHTQTKSDATLSPMSLYSTLHKEVPQALSSTK SQQKDEEHRDQRQQEGYEQEQEQEEGKKKTPWCTVESLQQTSSSNQVYESYTPIIPDPIVEFALSESQLSVLAGKRVTNL DVLRICTELMKLMLKSRANDTMTRLEERELMEREAHELAASYSRQAKYARWLGIATATLGILGAIAPMVGEISGDSILGF VQRISGRFKDATAKTFFKGIGKVFTSLSQLTEAASKVHELSESAVRAVAEYRKEVFRMRQDEVTRTIEEVKDNWKSMDNF LLNILQTEHDAARSLYQ >Mature_496_residues TVSYQSISTPPPEGEFDIFVDGNATEEAVVAAEVQVALPAGEQYAMLRATSELCFGILTQSECALTQALPPKEKPLQEEQ FLVKNGILMRSTSLPNLKPGQSQQTSLASHRNPLAQQSTSSNSTGKASTETTSSSFPFFSCKAPEGDSSVDKTFTVSVQT PKAQEQQEASASQSQAQFHVRSYSSSTIKEHSAKEKVSQSTKSAETQKHTQTKSDATLSPMSLYSTLHKEVPQALSSTKS QQKDEEHRDQRQQEGYEQEQEQEEGKKKTPWCTVESLQQTSSSNQVYESYTPIIPDPIVEFALSESQLSVLAGKRVTNLD VLRICTELMKLMLKSRANDTMTRLEERELMEREAHELAASYSRQAKYARWLGIATATLGILGAIAPMVGEISGDSILGFV QRISGRFKDATAKTFFKGIGKVFTSLSQLTEAASKVHELSESAVRAVAEYRKEVFRMRQDEVTRTIEEVKDNWKSMDNFL LNILQTEHDAARSLYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55088; Mature: 54957
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSYQSISTPPPEGEFDIFVDGNATEEAVVAAEVQVALPAGEQYAMLRATSELCFGILT CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH QSECALTQALPPKEKPLQEEQFLVKNGILMRSTSLPNLKPGQSQQTSLASHRNPLAQQST CCHHHHHHCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHCCC SSNSTGKASTETTSSSFPFFSCKAPEGDSSVDKTFTVSVQTPKAQEQQEASASQSQAQFH CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH VRSYSSSTIKEHSAKEKVSQSTKSAETQKHTQTKSDATLSPMSLYSTLHKEVPQALSSTK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SQQKDEEHRDQRQQEGYEQEQEQEEGKKKTPWCTVESLQQTSSSNQVYESYTPIIPDPIV HHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCHHH EFALSESQLSVLAGKRVTNLDVLRICTELMKLMLKSRANDTMTRLEERELMEREAHELAA HHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SYSRQAKYARWLGIATATLGILGAIAPMVGEISGDSILGFVQRISGRFKDATAKTFFKGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH GKVFTSLSQLTEAASKVHELSESAVRAVAEYRKEVFRMRQDEVTRTIEEVKDNWKSMDNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNILQTEHDAARSLYQ HHHHHHHHHHHHHHHCC >Mature Secondary Structure TVSYQSISTPPPEGEFDIFVDGNATEEAVVAAEVQVALPAGEQYAMLRATSELCFGILT CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH QSECALTQALPPKEKPLQEEQFLVKNGILMRSTSLPNLKPGQSQQTSLASHRNPLAQQST CCHHHHHHCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHCCC SSNSTGKASTETTSSSFPFFSCKAPEGDSSVDKTFTVSVQTPKAQEQQEASASQSQAQFH CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH VRSYSSSTIKEHSAKEKVSQSTKSAETQKHTQTKSDATLSPMSLYSTLHKEVPQALSSTK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SQQKDEEHRDQRQQEGYEQEQEQEEGKKKTPWCTVESLQQTSSSNQVYESYTPIIPDPIV HHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCHHH EFALSESQLSVLAGKRVTNLDVLRICTELMKLMLKSRANDTMTRLEERELMEREAHELAA HHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SYSRQAKYARWLGIATATLGILGAIAPMVGEISGDSILGFVQRISGRFKDATAKTFFKGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH GKVFTSLSQLTEAASKVHELSESAVRAVAEYRKEVFRMRQDEVTRTIEEVKDNWKSMDNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNILQTEHDAARSLYQ HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA