| Definition | Chlamydophila pneumoniae CWL029, complete genome. |
|---|---|
| Accession | NC_000922 |
| Length | 1,230,230 |
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Identifier: 15618903
GI number: 15618903
Start: 1144412
End: 1145512
Strand: Reverse
Name: Not Available
Synonym: CPn0995
Alternate gene names: NA
Gene position: 1145512-1144412 (Counterclockwise)
Preceding gene: 15618904
Following gene: 15618897
Centisome position: 93.11
GC content: 39.69
Gene sequence:
>1101_bases ATGTTGATTTGGAAACGCCACTTACTCACTAGATTTTGGTTTGCACTTACCTCTCTTTTGGTACTTGCTCTTATATTCTA TGCTTCCATTCATCACTCTTTGCATACCCTTAAAGGGGCCTCTACAGCTGCTTCTGGAGCTTCTGTCAAGCTCTCTATAT TGTACTACCTAGCACAGATTTCGTTAAAAGCAGAGTTCCTCATGCCTCAGCTTGTTGCAGTAGCAACAACAAGCACGCTT TTTGCTATGCAAAATAAGCGAGAAATTATTCTTCTACAAGCTTCTGGTCTCTCCTTAAAATCTCTAATGCATCCTCTTCT CCTTTCGGGAGCTGTGATCATGATGGTGCTCTATGCGAATTTCCAGTGGTTGCATCCTATTTGCGAGAAAATCTCTATTA CTAAAGAAAATATGGATAGAGGCACGACAGATAAAGAGCAGGGAAAAATTCCTGCTCTTTACCTCAAAGATCAAACAGTA CTCTTATATTCTTCTATTGAGCCTAAGACGCTTACTTTAAATAATGTCTTCTGGATCAAAGATCCTAAAACCATTTACAC CATGGAAAAGTTAGCGTTCACCACCCTCTCTCTTCCGATTGGTTTAAATGTCACACAATTTTTCGCTAATGATTCAGAAA ATCTTGAGCTTAAGGAGTTTTTCGATATGAAGGAGTTTCCTGAGATCGAGTTTAATTTCTATGAAAATCCTTTTTCCAAG CTATTTTCTGCAGGGAATAAAAACCGTCTTTCAGAATTTTTCAAGGCCATCCCTTGGAACGCTACAGGTTTAGGACTCTC GACACAAGTGCCACAAAGGATTCTTTCTCTTCTGGCTCAATTCTATTACGTCTTAATTTCACCACTTGCCTGTATGGCGG CTATCATTTTATCTGCCTATCTCTGTTTGAGATTTAGTAGAACACCAACGGTCACTCTAGCCTATTTGATCCCTTTAGGG ACGGTAAATATTTTCTTTGTCTTCCTAAAGGCGGGAATCGTCTTAGCCAGTAGCAGCGTTCTTCCCACACTTCCTGTGAT GGCTTTTCCTCTTATAGTACTCTTTCTACTTACAAATTATGCTTATGCGAAACTTCAGTGA
Upstream 100 bases:
>100_bases TCTACCCCTAGCCTTCATGCTATTTGTCTTCCCCCAATTGGTCTCTTGGGTTGTCTTTGCTGCTCGCGCGTATAGGGAAA GTCGAGGGTATGCTTAACGT
Downstream 100 bases:
>100_bases GTTCATGCAAGTACCCGGTGAACTCCCAACCTTCAATGTCATCTTTGAAGAAAGACTTCAGACTAGAAAATCCCTGACGA TTTTTCTTTAGACAGTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLIWKRHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQISLKAEFLMPQLVAVATTSTL FAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYANFQWLHPICEKISITKENMDRGTTDKEQGKIPALYLKDQTV LLYSSIEPKTLTLNNVFWIKDPKTIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFSK LFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSAYLCLRFSRTPTVTLAYLIPLG TVNIFFVFLKAGIVLASSSVLPTLPVMAFPLIVLFLLTNYAYAKLQ
Sequences:
>Translated_366_residues MLIWKRHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQISLKAEFLMPQLVAVATTSTL FAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYANFQWLHPICEKISITKENMDRGTTDKEQGKIPALYLKDQTV LLYSSIEPKTLTLNNVFWIKDPKTIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFSK LFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSAYLCLRFSRTPTVTLAYLIPLG TVNIFFVFLKAGIVLASSSVLPTLPVMAFPLIVLFLLTNYAYAKLQ >Mature_366_residues MLIWKRHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQISLKAEFLMPQLVAVATTSTL FAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYANFQWLHPICEKISITKENMDRGTTDKEQGKIPALYLKDQTV LLYSSIEPKTLTLNNVFWIKDPKTIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFSK LFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSAYLCLRFSRTPTVTLAYLIPLG TVNIFFVFLKAGIVLASSSVLPTLPVMAFPLIVLFLLTNYAYAKLQ
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41201; Mature: 41201
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIWKRHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH SLKAEFLMPQLVAVATTSTLFAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYAN HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC FQWLHPICEKISITKENMDRGTTDKEQGKIPALYLKDQTVLLYSSIEPKTLTLNNVFWIK HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCEEEECCEEEEE DPKTIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFSK CCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCHHHHHCHHHCCCCEEEECCCHHHH LFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSAY HHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLRFSRTPTVTLAYLIPLGTVNIFFVFLKAGIVLASSSVLPTLPVMAFPLIVLFLLTNY HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC AYAKLQ HHHCCC >Mature Secondary Structure MLIWKRHLLTRFWFALTSLLVLALIFYASIHHSLHTLKGASTAASGASVKLSILYYLAQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH SLKAEFLMPQLVAVATTSTLFAMQNKREIILLQASGLSLKSLMHPLLLSGAVIMMVLYAN HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC FQWLHPICEKISITKENMDRGTTDKEQGKIPALYLKDQTVLLYSSIEPKTLTLNNVFWIK HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCEEEECCEEEEE DPKTIYTMEKLAFTTLSLPIGLNVTQFFANDSENLELKEFFDMKEFPEIEFNFYENPFSK CCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCCCHHHHHCHHHCCCCEEEECCCHHHH LFSAGNKNRLSEFFKAIPWNATGLGLSTQVPQRILSLLAQFYYVLISPLACMAAIILSAY HHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCLRFSRTPTVTLAYLIPLGTVNIFFVFLKAGIVLASSSVLPTLPVMAFPLIVLFLLTNY HHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC AYAKLQ HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA