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The map label for this gene is oppC_2

Identifier: 15618507

GI number: 15618507

Start: 686476

End: 688215

Strand: Reverse

Name: oppC_2

Synonym: CPn0597

Alternate gene names: 15618507

Gene position: 688215-686476 (Counterclockwise)

Preceding gene: 15618508

Following gene: 15618503

Centisome position: 55.94

GC content: 43.51

Gene sequence:

>1740_bases
ATGCAGAAGCATCCTTCCTTTTATCAACGTTTTCTATCTGCTTACTATAAAAATTTATTAGCCTCTTTATCATGGAAATT
TTTTATTTCTGTCGCTCTGATTGGCATCTACGCTCCTTTATTTGCGAGTAGTAAACCTTTACTAGTCACCTGGCATGGAG
AGATCTTTTTTCCTTTACTGAGGTACTTGTTTTTCCCTGGGTATTACACTAAACCAGTGGATCTCTTTTTCAACGTTTTG
ATGGTCACGTTTCCCTTTTTCATACTTTCTTTTAAGTTGACTAGGGGGTGGTTACGTCGTTGGTTGTTGGGGCTGTGCAT
CATTTCTCAATGTATGATTTTTGCTTGGGCCTATAGTGGGAAAGTTCAAGATCCCGCGTTAGCTGAGAATTTAAAAAAAA
TGCGAGCTGAGAAGGTCCGAGAAAACATCAGTAAGGTGAATTCTGAGATGGTCATGCTGCTCCCCAAAGATACACGTACT
TGGGAGATGGAACGGCGGTATATGAGTACGTATGAGCAGTTGGGGATTCTCATTAAGGCAAAGTATCGAAAGAAACAAGA
GGCTTCTGTAAAGAAGTATCAGGTCGCTTTTGAAGAAAAACGGCAGTCTCCGATGCCAACATTGCGTCACTTAGAGATGA
AAAATGAAGGCATTTGCCTTAAAAGATTACAGCAAAGAGTCGACAAGATGCAGCGTCCCTATGAGATGGCGCAGCAAGCT
TGGAATCGTGCTACGGACAACTACCGACCGTTTCTGATGGCCTTGACAAGAATAGAGCATGAGCTCCGCCTCGCGGATTA
CAACAACTGGGGGCAACCTGAAGACCTTTGTATTGCTTATGCTAATGTAGAGAAACGAGCAGAGCCCTATAAAAAATCTT
TGTTGGAGATTCGTCAGGTACTTGAAGACTATGCCAAGCTGCGCAGCGCGATCAGTTTCATTCAAGATAAGCGTTTGTGG
ATCGAGAAAGAGTCTGAAGATCTTCGCATTTTGATTAACCCCTTTTTCAGTAGTTTCCATTGGGAAGATGATGCTGGGGG
ATCTCGAGAAATGAACAAGTATGTTCCTTGGTGGCAGCTTAGCAGAGTCACTCGGAAAGATTTACTAGCGGCTTTAGTAT
TTGGCATTCGCATAGCTTTGGTAGTCGCAGGTATTGGGATTACGATAGCTTTAGCTATCGGGATTATGATCGGGTTGGTT
TCTGGATATTTCGGTGGGACCGTGGATATGATTTTATCTCGGTTTACTGAAATTTGGGAGACCATGCCTGTGCTGTTTAT
CTTAATGCTGGTGATTTCCATAACACAGCAGAAATCTTTGCTATTGAACACAGTTTTGCTAGGCTGTTTTAGTTGGACAG
GGTTTAGTAGGTATGTCCGTATTGAGGTGTTGAAACAGCGAGACCGAGGTTATGTTCTTGCTGCTACAAACTTAGGGTAT
AGCCACTATTATATTATGGTGCATCAGATCCTTCCCAATGCCATTGTCCCTGTGATCTCTTTAGTTCCGTTTGCTATGAT
GGCTATGATTAGCTGTGAGGCAGGGCTGACCTTTTTAGGTCTGGGGGAAGAGAGTTCCGCGTCTTGGGGAAATCTTATGA
GGGAGGGTGTTACAGGATTCCCTGCAGAGAGTGCTGTTCTTTGGCCTCCAGCAATTATATTAACGATGTTGCTGATTGCG
ATCGCTCTGATAGGAGACGGAGTCCGTGATGCTTTAGATCCCCGTCTGCAAGACTCTTAA

Upstream 100 bases:

>100_bases
GCTTGTAGGATCGGCTCTATCTTTAGTGGGATATTTGCTCGGAGATATTTGCTACGTACTCTTAGATCCTCGAGTTCAGC
TAGAGGGAAGGAGGATATAA

Downstream 100 bases:

>100_bases
ATCTATAGCTGGGGATTAGTAGCTATTCTCAAATTTCAATAAGATCTCGTGAATTACAGGCCCTAGGACGTAATTACGCT
CTCCATGGCTTCCTACGACG

Product: oligopeptide permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MQKHPSFYQRFLSAYYKNLLASLSWKFFISVALIGIYAPLFASSKPLLVTWHGEIFFPLLRYLFFPGYYTKPVDLFFNVL
MVTFPFFILSFKLTRGWLRRWLLGLCIISQCMIFAWAYSGKVQDPALAENLKKMRAEKVRENISKVNSEMVMLLPKDTRT
WEMERRYMSTYEQLGILIKAKYRKKQEASVKKYQVAFEEKRQSPMPTLRHLEMKNEGICLKRLQQRVDKMQRPYEMAQQA
WNRATDNYRPFLMALTRIEHELRLADYNNWGQPEDLCIAYANVEKRAEPYKKSLLEIRQVLEDYAKLRSAISFIQDKRLW
IEKESEDLRILINPFFSSFHWEDDAGGSREMNKYVPWWQLSRVTRKDLLAALVFGIRIALVVAGIGITIALAIGIMIGLV
SGYFGGTVDMILSRFTEIWETMPVLFILMLVISITQQKSLLLNTVLLGCFSWTGFSRYVRIEVLKQRDRGYVLAATNLGY
SHYYIMVHQILPNAIVPVISLVPFAMMAMISCEAGLTFLGLGEESSASWGNLMREGVTGFPAESAVLWPPAIILTMLLIA
IALIGDGVRDALDPRLQDS

Sequences:

>Translated_579_residues
MQKHPSFYQRFLSAYYKNLLASLSWKFFISVALIGIYAPLFASSKPLLVTWHGEIFFPLLRYLFFPGYYTKPVDLFFNVL
MVTFPFFILSFKLTRGWLRRWLLGLCIISQCMIFAWAYSGKVQDPALAENLKKMRAEKVRENISKVNSEMVMLLPKDTRT
WEMERRYMSTYEQLGILIKAKYRKKQEASVKKYQVAFEEKRQSPMPTLRHLEMKNEGICLKRLQQRVDKMQRPYEMAQQA
WNRATDNYRPFLMALTRIEHELRLADYNNWGQPEDLCIAYANVEKRAEPYKKSLLEIRQVLEDYAKLRSAISFIQDKRLW
IEKESEDLRILINPFFSSFHWEDDAGGSREMNKYVPWWQLSRVTRKDLLAALVFGIRIALVVAGIGITIALAIGIMIGLV
SGYFGGTVDMILSRFTEIWETMPVLFILMLVISITQQKSLLLNTVLLGCFSWTGFSRYVRIEVLKQRDRGYVLAATNLGY
SHYYIMVHQILPNAIVPVISLVPFAMMAMISCEAGLTFLGLGEESSASWGNLMREGVTGFPAESAVLWPPAIILTMLLIA
IALIGDGVRDALDPRLQDS
>Mature_579_residues
MQKHPSFYQRFLSAYYKNLLASLSWKFFISVALIGIYAPLFASSKPLLVTWHGEIFFPLLRYLFFPGYYTKPVDLFFNVL
MVTFPFFILSFKLTRGWLRRWLLGLCIISQCMIFAWAYSGKVQDPALAENLKKMRAEKVRENISKVNSEMVMLLPKDTRT
WEMERRYMSTYEQLGILIKAKYRKKQEASVKKYQVAFEEKRQSPMPTLRHLEMKNEGICLKRLQQRVDKMQRPYEMAQQA
WNRATDNYRPFLMALTRIEHELRLADYNNWGQPEDLCIAYANVEKRAEPYKKSLLEIRQVLEDYAKLRSAISFIQDKRLW
IEKESEDLRILINPFFSSFHWEDDAGGSREMNKYVPWWQLSRVTRKDLLAALVFGIRIALVVAGIGITIALAIGIMIGLV
SGYFGGTVDMILSRFTEIWETMPVLFILMLVISITQQKSLLLNTVLLGCFSWTGFSRYVRIEVLKQRDRGYVLAATNLGY
SHYYIMVHQILPNAIVPVISLVPFAMMAMISCEAGLTFLGLGEESSASWGNLMREGVTGFPAESAVLWPPAIILTMLLIA
IALIGDGVRDALDPRLQDS

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=35.8407079646018, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787498, Length=255, Percent_Identity=31.7647058823529, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1787054, Length=223, Percent_Identity=26.457399103139, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789964, Length=215, Percent_Identity=32.093023255814, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1787760, Length=229, Percent_Identity=28.82096069869, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789889, Length=231, Percent_Identity=25.974025974026, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 66893; Mature: 66893

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]