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The map label for this gene is fliC

Identifier: 15606990

GI number: 15606990

Start: 1405481

End: 1407037

Strand: Direct

Name: fliC

Synonym: aq_1998

Alternate gene names: 15606990

Gene position: 1405481-1407037 (Clockwise)

Preceding gene: 15606989

Following gene: 15606991

Centisome position: 90.6

GC content: 43.42

Gene sequence:

>1557_bases
ATGGCAACGAGGATTAATTACAATTATGAGGCTGCCGTTACTTATACTAGTTTAAAACAAAACGAGAGGTTGATGAATAA
GTCCCTCTTAAGGCTTTCTACCGGTCTCAGGATACTCTCCGCAGCGGACGACGCTTCCGGACTATTCATAGCGGATCAGC
TTGCACTCGTATCCGCAGGACTTGAGCAGGGTAACAGGAACATTCAGTTCGGTATTTCCGCACTCCAGATAGCCGAAGGT
GGAGTATCCCAAATTTACGACAAACTAAAGACAATGTACCAAAAGGCTGTAAGTGCCGCAAATGATATTAATGACCCGAA
TGCAAGGGCTGCACTCCAGAGGGACATAGAAAACTTAAGAGATGCTATTTTGAAAATCGCACAGGATACAGAATACAACG
GAATAAGACTTCTAAACGGTTCTTTCAATAACGTAAGAATTCACTACGGTGCGAGAAGTGCTCAAACGCTATCCGTGAGC
ATATCAAGTGTATTACCACAACAACTTGGTGGATACGTAGCAGAAGATTCTCCAGCCACCGCAACGGATACGAATAACGT
TCTTACAAATATAGGCACAACGAATACCAACTATTCAGTGGCAAGCGGTGATTCTTTAGCGTTTACATTCACAGACGGGA
CAAGCATAACGTTTAACTCCTTAAACCAGCTCGGATATGACTTCAACAATACTGGAACTTACATACTTGACGCATCCGCA
ATTGTGAATACGATAAACAACAACCCGACACTTCAAGGGAAAGGAATAAGGGCTTATGCGGAGAACGTATCGGAAGCTGA
CCTGACATTTGATACGACAAATGTGAATATTGACCAAGGTGATGAAGTAACTATTACATTCTACTCAGGAGGAGAACTTG
TATTTACAAAGACGTATACAGATACGGTAACACTAGACCAGTTTATAGCTGATATAAACAACCAGGCTGGTGGAAAGCTT
ATAGCTTCAAAGGACCCTTCAGGAACCAAACTCGTTCTTTCCACACCAAACGGGGAAACCATATCTGTTGAAGTAACAGT
AAACGATGCAGATGGAGATACAGTAGTAAGCAGTATAAACCTGGGGGCTCTTCTGCAAGGTGCAGCTGGAACTGTAGTTA
ATACCAGTGGAGCTACAGCATCCGCGGTAAAAGTCGGAACGCTTATCGTAATGGGTTCAGAAAACTTCACAGTTCAAGGA
ACCGGAATAGCATACTTTACAGCAGCTACGAGCGGAACATTCAACTCACTTAATGATGTAGACGTAACAACTAACAAAGG
TGCTGAAATCGCTCAGGTTTTAATCCAGAGGGCTGTAAGACAAGTTGACACCATACGCACCCAGATAGGTTCAACTATAA
ACAACCTCCAAGCTATCTACGACGCTCAAGCGGTTGCTAAAGACAACACGGACAACGCAGAAAGCATAATTAGGAACGTG
GACTTTGCTAAGGAAATGACTGAATTCACTAAATATCAAATAAGGATGCAGTCCGGAGTGGCTATGCTCGCACAAGCAAA
CGCTCTACCTCAACTGGTTCTCCAGCTCCTCAGGTAA

Upstream 100 bases:

>100_bases
CTTCAAAACATACCTCAAATAACCTCCTCCCTCCTCTAAAACTTTTTTCTTTTCCTCCGATAAATATAAATGACAAAACC
TTAAAAAGGAGGTAAAAGGG

Downstream 100 bases:

>100_bases
TGTTTCCTTTTCCCTTTTCTTTTTACCTTTTGAGGGGCTGAGATGAGGGTTCAAAGAGAAAATGGTTCTTTTGACTGGGA
ATTTCTCAAAGAGATTCAAC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MATRINYNYEAAVTYTSLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLALVSAGLEQGNRNIQFGISALQIAEG
GVSQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLRDAILKIAQDTEYNGIRLLNGSFNNVRIHYGARSAQTLSVS
ISSVLPQQLGGYVAEDSPATATDTNNVLTNIGTTNTNYSVASGDSLAFTFTDGTSITFNSLNQLGYDFNNTGTYILDASA
IVNTINNNPTLQGKGIRAYAENVSEADLTFDTTNVNIDQGDEVTITFYSGGELVFTKTYTDTVTLDQFIADINNQAGGKL
IASKDPSGTKLVLSTPNGETISVEVTVNDADGDTVVSSINLGALLQGAAGTVVNTSGATASAVKVGTLIVMGSENFTVQG
TGIAYFTAATSGTFNSLNDVDVTTNKGAEIAQVLIQRAVRQVDTIRTQIGSTINNLQAIYDAQAVAKDNTDNAESIIRNV
DFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR

Sequences:

>Translated_518_residues
MATRINYNYEAAVTYTSLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLALVSAGLEQGNRNIQFGISALQIAEG
GVSQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLRDAILKIAQDTEYNGIRLLNGSFNNVRIHYGARSAQTLSVS
ISSVLPQQLGGYVAEDSPATATDTNNVLTNIGTTNTNYSVASGDSLAFTFTDGTSITFNSLNQLGYDFNNTGTYILDASA
IVNTINNNPTLQGKGIRAYAENVSEADLTFDTTNVNIDQGDEVTITFYSGGELVFTKTYTDTVTLDQFIADINNQAGGKL
IASKDPSGTKLVLSTPNGETISVEVTVNDADGDTVVSSINLGALLQGAAGTVVNTSGATASAVKVGTLIVMGSENFTVQG
TGIAYFTAATSGTFNSLNDVDVTTNKGAEIAQVLIQRAVRQVDTIRTQIGSTINNLQAIYDAQAVAKDNTDNAESIIRNV
DFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR
>Mature_517_residues
ATRINYNYEAAVTYTSLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLALVSAGLEQGNRNIQFGISALQIAEGG
VSQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLRDAILKIAQDTEYNGIRLLNGSFNNVRIHYGARSAQTLSVSI
SSVLPQQLGGYVAEDSPATATDTNNVLTNIGTTNTNYSVASGDSLAFTFTDGTSITFNSLNQLGYDFNNTGTYILDASAI
VNTINNNPTLQGKGIRAYAENVSEADLTFDTTNVNIDQGDEVTITFYSGGELVFTKTYTDTVTLDQFIADINNQAGGKLI
ASKDPSGTKLVLSTPNGETISVEVTVNDADGDTVVSSINLGALLQGAAGTVVNTSGATASAVKVGTLIVMGSENFTVQGT
GIAYFTAATSGTFNSLNDVDVTTNKGAEIAQVLIQRAVRQVDTIRTQIGSTINNLQAIYDAQAVAKDNTDNAESIIRNVD
FAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family

Homologues:

Organism=Escherichia coli, GI1788232, Length=206, Percent_Identity=33.9805825242718, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): FLAA_AQUAE (O67803)

Other databases:

- EMBL:   AE000657
- PIR:   G70471
- RefSeq:   NP_214372.1
- PDB:   1ORY
- PDBsum:   1ORY
- ProteinModelPortal:   O67803
- IntAct:   O67803
- GeneID:   1193700
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1998
- NMPDR:   fig|224324.1.peg.1387
- HOGENOM:   HBG758847
- OMA:   SEINERQ
- PhylomeDB:   O67803
- ProtClustDB:   CLSK871734
- BioCyc:   AAEO224324:AQ_1998-MONOMER
- InterPro:   IPR001492
- InterPro:   IPR001029
- PRINTS:   PR00207

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N

EC number: NA

Molecular weight: Translated: 55178; Mature: 55047

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRINYNYEAAVTYTSLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLALVSAG
CCEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHH
LEQGNRNIQFGISALQIAEGGVSQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLR
HHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DAILKIAQDTEYNGIRLLNGSFNNVRIHYGARSAQTLSVSISSVLPQQLGGYVAEDSPAT
HHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCEEECCCCCC
ATDTNNVLTNIGTTNTNYSVASGDSLAFTFTDGTSITFNSLNQLGYDFNNTGTYILDASA
CCCCCCEEEECCCCCCCEEEECCCEEEEEEECCCEEEEHHHHHCCCCCCCCCCEEEEHHH
IVNTINNNPTLQGKGIRAYAENVSEADLTFDTTNVNIDQGDEVTITFYSGGELVFTKTYT
HHHHCCCCCEECCCCCHHHHCCCCCCCEEEEEEEEEECCCCEEEEEEEECCEEEEEEECC
DTVTLDQFIADINNQAGGKLIASKDPSGTKLVLSTPNGETISVEVTVNDADGDTVVSSIN
CCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEECC
LGALLQGAAGTVVNTSGATASAVKVGTLIVMGSENFTVQGTGIAYFTAATSGTFNSLNDV
CCCEECCCCCCEEECCCCCCCEEEEEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCC
DVTTNKGAEIAQVLIQRAVRQVDTIRTQIGSTINNLQAIYDAQAVAKDNTDNAESIIRNV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR
HHHHHHHHHHHHEEEHHCCEEEEHHHCHHHHHHHHHHC
>Mature Secondary Structure 
ATRINYNYEAAVTYTSLKQNERLMNKSLLRLSTGLRILSAADDASGLFIADQLALVSAG
CEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHHHHHHH
LEQGNRNIQFGISALQIAEGGVSQIYDKLKTMYQKAVSAANDINDPNARAALQRDIENLR
HHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DAILKIAQDTEYNGIRLLNGSFNNVRIHYGARSAQTLSVSISSVLPQQLGGYVAEDSPAT
HHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCEEECCCCCC
ATDTNNVLTNIGTTNTNYSVASGDSLAFTFTDGTSITFNSLNQLGYDFNNTGTYILDASA
CCCCCCEEEECCCCCCCEEEECCCEEEEEEECCCEEEEHHHHHCCCCCCCCCCEEEEHHH
IVNTINNNPTLQGKGIRAYAENVSEADLTFDTTNVNIDQGDEVTITFYSGGELVFTKTYT
HHHHCCCCCEECCCCCHHHHCCCCCCCEEEEEEEEEECCCCEEEEEEEECCEEEEEEECC
DTVTLDQFIADINNQAGGKLIASKDPSGTKLVLSTPNGETISVEVTVNDADGDTVVSSIN
CCHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEECC
LGALLQGAAGTVVNTSGATASAVKVGTLIVMGSENFTVQGTGIAYFTAATSGTFNSLNDV
CCCEECCCCCCEEECCCCCCCEEEEEEEEEECCCCEEEEECCEEEEEEECCCCCCCCCCC
DVTTNKGAEIAQVLIQRAVRQVDTIRTQIGSTINNLQAIYDAQAVAKDNTDNAESIIRNV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DFAKEMTEFTKYQIRMQSGVAMLAQANALPQLVLQLLR
HHHHHHHHHHHHEEEHHCCEEEEHHHCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320