| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15606733
Identifier: 15606733
GI number: 15606733
Start: 1140007
End: 1140756
Strand: Direct
Name: 15606733
Synonym: aq_1625
Alternate gene names: NA
Gene position: 1140007-1140756 (Clockwise)
Preceding gene: 15606732
Following gene: 15606734
Centisome position: 73.49
GC content: 43.87
Gene sequence:
>750_bases GTGAAAGTAATATTCCTAGGAACAGCGGGCGGAAGAGTTGTAACCTTCAACTTAATAAGGCGTTCTGGAGGTTTCCTTTT AGAGGAAAACAGCAGTTACCTTCACGTTGACCCCGGTCCCGGAGCTTTCGTTTACCTTCATCAGCTCGGTATAGATTACA AAAAAATAGATTTAATAGTCCTCTCCCACCTCCACTTGGACCACTCAGCCGATGTGAATACGCTTATAGAGGCTGCCACA AACGGCGGTAAGTACAGAAACCTCTCTCTCTTTGCTCCCAAAAGTGCCCTTGAAGGAGCAGACCGAGTAGTTTTTCCCTA CAACAGGCGAAGACTTGTCAAAGAAGAAACTTTCAGCGAAGGCTCGGAGCACCATTACAAAAACTGGAAAGTTAAGGCGG TAATAAAACACAAACACCACAGGACGGAAACTTACGGACTTTTTCTTCAAAACAAAGTGGTTTACGTTTCCTGCGCGGGA TTCGAAGAAAGGATGCTCACGCTTTACCCCAAAAACGCGGACTTGATGATAATAAATACAACCTTTTACAGGAAAAGACC CAACGTTGAACACCTTTCGGCGGAAGATGCAAAGGTTTTAATCTCTCACCTGAAACCTAAAAAAGCCGTAATAACACACT ACTCCATGGAGATGCTACAGATAGGCCCCGATAAAGTTGCTGAGGAGATAACAAAAGAAACGGGAATTGAAACGATAGCG GCGAAAGACAACATGATTCTTGAGATATAA
Upstream 100 bases:
>100_bases ATCACTGCTGGATGATAGTCCCGGAAGGACTGGAAGACGAAGTCAGAGAAGTAGAAGAAGAGTGCCCCAGCGGTTCTATT ATCGTTGAAGAACTCGAAGA
Downstream 100 bases:
>100_bases TTCAGTAAATGCCTGCGATATTCACCCATGAAGGAAAGGTAGAAGGCGTTCCAGGAAATTACCCCTTAACTGCCGAAAAC CTCTTCAGAATAGGTCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKVIFLGTAGGRVVTFNLIRRSGGFLLEENSSYLHVDPGPGAFVYLHQLGIDYKKIDLIVLSHLHLDHSADVNTLIEAAT NGGKYRNLSLFAPKSALEGADRVVFPYNRRRLVKEETFSEGSEHHYKNWKVKAVIKHKHHRTETYGLFLQNKVVYVSCAG FEERMLTLYPKNADLMIINTTFYRKRPNVEHLSAEDAKVLISHLKPKKAVITHYSMEMLQIGPDKVAEEITKETGIETIA AKDNMILEI
Sequences:
>Translated_249_residues MKVIFLGTAGGRVVTFNLIRRSGGFLLEENSSYLHVDPGPGAFVYLHQLGIDYKKIDLIVLSHLHLDHSADVNTLIEAAT NGGKYRNLSLFAPKSALEGADRVVFPYNRRRLVKEETFSEGSEHHYKNWKVKAVIKHKHHRTETYGLFLQNKVVYVSCAG FEERMLTLYPKNADLMIINTTFYRKRPNVEHLSAEDAKVLISHLKPKKAVITHYSMEMLQIGPDKVAEEITKETGIETIA AKDNMILEI >Mature_249_residues MKVIFLGTAGGRVVTFNLIRRSGGFLLEENSSYLHVDPGPGAFVYLHQLGIDYKKIDLIVLSHLHLDHSADVNTLIEAAT NGGKYRNLSLFAPKSALEGADRVVFPYNRRRLVKEETFSEGSEHHYKNWKVKAVIKHKHHRTETYGLFLQNKVVYVSCAG FEERMLTLYPKNADLMIINTTFYRKRPNVEHLSAEDAKVLISHLKPKKAVITHYSMEMLQIGPDKVAEEITKETGIETIA AKDNMILEI
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28263; Mature: 28263
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIFLGTAGGRVVTFNLIRRSGGFLLEENSSYLHVDPGPGAFVYLHQLGIDYKKIDLIV CEEEEEECCCCEEEEEEEEECCCCEEEECCCCEEEECCCCCEEEEEEECCCCHHHEEEEE LSHLHLDHSADVNTLIEAATNGGKYRNLSLFAPKSALEGADRVVFPYNRRRLVKEETFSE EEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHCCCCEEEECCCCCHHHHHHHHCC GSEHHYKNWKVKAVIKHKHHRTETYGLFLQNKVVYVSCAGFEERMLTLYPKNADLMIINT CCCCCCCCEEEEEEEECCCCCCEEEEEEEECEEEEEEECCCCCCEEEEECCCCCEEEEEE TFYRKRPNVEHLSAEDAKVLISHLKPKKAVITHYSMEMLQIGPDKVAEEITKETGIETIA EEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEHEEHEEEECCHHHHHHHHHHHCCCEEEE AKDNMILEI ECCCEEEEC >Mature Secondary Structure MKVIFLGTAGGRVVTFNLIRRSGGFLLEENSSYLHVDPGPGAFVYLHQLGIDYKKIDLIV CEEEEEECCCCEEEEEEEEECCCCEEEECCCCEEEECCCCCEEEEEEECCCCHHHEEEEE LSHLHLDHSADVNTLIEAATNGGKYRNLSLFAPKSALEGADRVVFPYNRRRLVKEETFSE EEEECCCCCCCHHHHHHHHCCCCCEEEEEEECCHHHHCCCCEEEECCCCCHHHHHHHHCC GSEHHYKNWKVKAVIKHKHHRTETYGLFLQNKVVYVSCAGFEERMLTLYPKNADLMIINT CCCCCCCCEEEEEEEECCCCCCEEEEEEEECEEEEEEECCCCCCEEEEECCCCCEEEEEE TFYRKRPNVEHLSAEDAKVLISHLKPKKAVITHYSMEMLQIGPDKVAEEITKETGIETIA EEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEHEEHEEEECCHHHHHHHHHHHCCCEEEE AKDNMILEI ECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]