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The map label for this gene is yghF [C]

Identifier: 15606636

GI number: 15606636

Start: 1050573

End: 1051361

Strand: Direct

Name: yghF [C]

Synonym: aq_1473

Alternate gene names: 15606636

Gene position: 1050573-1051361 (Clockwise)

Preceding gene: 15606635

Following gene: 15606637

Centisome position: 67.72

GC content: 41.44

Gene sequence:

>789_bases
ATGTACCTTGTATACGCCCTGAGTTTAGCTTTTACTTTATCCGTATTCCTCAGCGTGTTCAGTCTATATTACCTCTTTAA
CCGCTCCCTTGACATTAACTTCGTCCCGAAGGTTAAAAAAGAAGAAAGTGTGAATTTGGCAAATCTTCAGGGGAAATTGA
AGGAGATATTCAATTACTCCGTTCAGGAAGTAAAAACCTCAAAACCTTCGGTGAGCTCCGCTGTTTCTCCGCCTTCGTTC
AAGGTCAAAGGAATTATAATTTCGGAAAGGATAAGGGGTGTGATACTCGAAGAAGGTTCAAAAGATGTTTTCTTATCCGA
AGGTCAATCTTTCAAGGGCTACAAGCTTGCAAAGGTAGAAAACGATAGGGTAATTTTTGAGAAAAACGGTGTAGAATTTC
CCCTAGAGTTTAAAGTAACGAAGGGAGAAAAGAGTTTAACTCAAGTAAACCCTACTCTTTCAAGCCTTCCCTCGGAAATC
GTGGTAAGTAGGAGGGAAATTCTGGAACTCACCAAGGACCCCGCGAAGATGTTCACTCAAATACGCTTAGTGCCTTACAT
AAAAAATGGAAAAACCGAGGGCTTTATATTCGAGTGGGTAAAGCCCGGAAGTTTGTTTTACAAGCTCGGGCTGAGGAGAG
GAGACATTCTCGTTTCCATTAACAACACTACGATAAGGAGCGGAGAGGATGCCTTCAGGATACTGCAAATGATAAGGAAC
GAACCTAACTTAAAAGTAGAGCTTATCAGAAGAGGTAAAAGGGAGGAGATAAATGTCCGAATTGAGTGA

Upstream 100 bases:

>100_bases
TATCCGGGGTAGCTCAATCGGCAGAGCGGGTGGCTGTTAACCACCTGGTTGGGGGTTCGAGTCCCTCCCCCGGAGCCATT
TCCACAATACAATAATTCCT

Downstream 100 bases:

>100_bases
AAGCTTTGAGTACATAGTAGAAGAAGAAAACGAGAGGGAACTCCTCGTAATCGTCCCTCAAAATTACAACTTTTTTGCAG
TTGAGGAACTGAGATTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: PDZ/DHR/GLGF Domain Protein

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MYLVYALSLAFTLSVFLSVFSLYYLFNRSLDINFVPKVKKEESVNLANLQGKLKEIFNYSVQEVKTSKPSVSSAVSPPSF
KVKGIIISERIRGVILEEGSKDVFLSEGQSFKGYKLAKVENDRVIFEKNGVEFPLEFKVTKGEKSLTQVNPTLSSLPSEI
VVSRREILELTKDPAKMFTQIRLVPYIKNGKTEGFIFEWVKPGSLFYKLGLRRGDILVSINNTTIRSGEDAFRILQMIRN
EPNLKVELIRRGKREEINVRIE

Sequences:

>Translated_262_residues
MYLVYALSLAFTLSVFLSVFSLYYLFNRSLDINFVPKVKKEESVNLANLQGKLKEIFNYSVQEVKTSKPSVSSAVSPPSF
KVKGIIISERIRGVILEEGSKDVFLSEGQSFKGYKLAKVENDRVIFEKNGVEFPLEFKVTKGEKSLTQVNPTLSSLPSEI
VVSRREILELTKDPAKMFTQIRLVPYIKNGKTEGFIFEWVKPGSLFYKLGLRRGDILVSINNTTIRSGEDAFRILQMIRN
EPNLKVELIRRGKREEINVRIE
>Mature_262_residues
MYLVYALSLAFTLSVFLSVFSLYYLFNRSLDINFVPKVKKEESVNLANLQGKLKEIFNYSVQEVKTSKPSVSSAVSPPSF
KVKGIIISERIRGVILEEGSKDVFLSEGQSFKGYKLAKVENDRVIFEKNGVEFPLEFKVTKGEKSLTQVNPTLSSLPSEI
VVSRREILELTKDPAKMFTQIRLVPYIKNGKTEGFIFEWVKPGSLFYKLGLRRGDILVSINNTTIRSGEDAFRILQMIRN
EPNLKVELIRRGKREEINVRIE

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG3031

COG function: function code U; Type II secretory pathway, component PulC

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29897; Mature: 29897

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVYALSLAFTLSVFLSVFSLYYLFNRSLDINFVPKVKKEESVNLANLQGKLKEIFNYS
CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCH
VQEVKTSKPSVSSAVSPPSFKVKGIIISERIRGVILEEGSKDVFLSEGQSFKGYKLAKVE
HHHHHCCCCCCHHCCCCCCEEEEEEEEEHHHCEEEEECCCCEEEEECCCCCCCEEEEEEC
NDRVIFEKNGVEFPLEFKVTKGEKSLTQVNPTLSSLPSEIVVSRREILELTKDPAKMFTQ
CCEEEEECCCCEEEEEEEEECCCCHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHH
IRLVPYIKNGKTEGFIFEWVKPGSLFYKLGLRRGDILVSINNTTIRSGEDAFRILQMIRN
EEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCEEECCHHHHHHHHHHHC
EPNLKVELIRRGKREEINVRIE
CCCCEEEEECCCCCCEEEEEEC
>Mature Secondary Structure
MYLVYALSLAFTLSVFLSVFSLYYLFNRSLDINFVPKVKKEESVNLANLQGKLKEIFNYS
CEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCH
VQEVKTSKPSVSSAVSPPSFKVKGIIISERIRGVILEEGSKDVFLSEGQSFKGYKLAKVE
HHHHHCCCCCCHHCCCCCCEEEEEEEEEHHHCEEEEECCCCEEEEECCCCCCCEEEEEEC
NDRVIFEKNGVEFPLEFKVTKGEKSLTQVNPTLSSLPSEIVVSRREILELTKDPAKMFTQ
CCEEEEECCCCEEEEEEEEECCCCHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHHHH
IRLVPYIKNGKTEGFIFEWVKPGSLFYKLGLRRGDILVSINNTTIRSGEDAFRILQMIRN
EEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCEEECCHHHHHHHHHHHC
EPNLKVELIRRGKREEINVRIE
CCCCEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA