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The map label for this gene is oppA [C]

Identifier: 15606614

GI number: 15606614

Start: 1023795

End: 1025549

Strand: Direct

Name: oppA [C]

Synonym: aq_1441

Alternate gene names: 15606614

Gene position: 1023795-1025549 (Clockwise)

Preceding gene: 15606613

Following gene: 15606615

Centisome position: 65.99

GC content: 42.91

Gene sequence:

>1755_bases
ATGTTCGCCTTGATTTTGGCTTTCCTTATTATGTTTCTATCCTTCCTTCCCTTTCACCTTCTTTCTTCTCCTAAAGGTGA
AAAACTTCAGATAATAAAAATAATAAAATTAGATATACAAAAAGCCTTTCCCGAAATTCCTCAGGAGATTTCTAAAAGAG
TTTTGCGTTTTCATTTATCCTCCGATCCCAAAACCCTGAACCCTGCCCTTGCCATGGAAACCTCTTCCACCGCTGTAATC
GGAGATCTTTTTAGCGGACTTACGAAGCTTGATCTAAAGACGATGAAAGTAAAACCGAATCTGGCTCAAGGCTGGGAAGT
AAGAGAAGGGGGGAAAGTATGGATTTTTTACTTACGAAAAGACGTAAAGTGGAGCGATGGAAAGCCTTTTACCGCCGATG
ACGTTGTATTTACCTTTAACGAGGTTTACCTGAACGATAAAATTCCCACCACTGCAAGGGATATATTCACGATAAAAGGA
AAAAAGATAAAAGTGAGAAAAATTGACGAGTACACCGTTGAGTTTATTCTACCCGAGCCTTTCGCACCCTTTTTAAACTC
CCTCGGAGTTGAAATACTCCCGAAGCACAAACTCGAAAATTACGTAAAGGAGGGAACTTTCTCAACAGCGTGGAACGTAA
ACACAAACCCTAAGGAAATAGTGGGAACCGGAGCCTACAAAATAGAGGAATACGTGAAGGGACAGAGAGTAGTTTACAGG
GCAAACCCCTATTACTACGAGAAAGACGAAAATGGAAACAGACTCCCATACATTAAAGAAAAAGTAGGAGTAATAATTCC
GGATCCCGATACCGCACTCCTTAAATTCGTAAACGGGGAGATTGATTACATAGGCGTCAGGGCTCAGGATTTGCTCTTTT
TGGCTAATCAAAAGGATAAGGATTTTGTAGTTTACGACCTCGGAGCTACGCCTTCAACCACGTTTCTTGTCTTCAACCAG
AACCCTAACGCAAAAATCCCGAAGTACAAAATAAAGTGGTTCAGGGACAGGACATTCAGAATAGCCATTTCCCACGCAAT
AGACAGGGAGGGAATAGTGAAACTCGTTTACAACGGGCTTGCTCAACCGCTCTACACACCAATCACACCGGCAAACAGAC
CTTATTACGAGGAGAGTTATTACCCGAAATTTGAGTTTAACCTGAAAAAAGCCAGAGAACTTTTAGAGAGTATAGGTTTT
AAAGACAGGGACGGCGACGGAATACTGGAAGACCCTGAAGGACACGACCTTGAGTTTACACTCATCACAAACGCAGGAAA
CAAAGAAAGGGAAATGATGGGAGCTATCATTAAGGAAGATTTAAGGAAGATCGGTATAAAGGTCCACTTCCAGCCCATAG
ACTTCAACACTTTAGTTTCAAAACTCACGTCTCCTCCCTACGAGTGGGAAGCGGTGATAATAGGACTCACGGGATCTATA
GACCCTCACTTTGGCAGGAACGTATGGCACTCTTCGGGAAGTCTCCACATGTGGTATCCGAGACAAAAACAACCCTCAAC
AGAATGGGAGAAGAAGGTGGATGAGCTTATAGACAAGGGGGCAACGGAACTGAACTATGAGAAAAGAGTCCAGATTTACA
GGGAAATGTTCAGGATAATTACGGAAGAACAACCGATGATTTTCATAGCAGCTCCGAAGAGTATGGTAGCGGTAAAGAAA
CACCTCAAAAACGTATTTCCCACCGTGTGGGGCTGGTACGAGCCATACAGAGTTTACCTGATATCGGACAGGTGA

Upstream 100 bases:

>100_bases
ATTGGAGGACTTCTTTAAAACACTTACTTGTGAAAGTGAAAAAGGCAGTGGAAATCTAACCCTCCCACAACACTTAGTAG
GTTCAATATACTAACATTGT

Downstream 100 bases:

>100_bases
TTTAAGTAATGGAACAAAATTTTTAAAAATTTAAGATTTAATCCATGCTCAAACTCGTACTCATAACAAAAGAAGACTGT
CCGAGGTGTGAAAGGGCTAA

Product: extracellular solute binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MFALILAFLIMFLSFLPFHLLSSPKGEKLQIIKIIKLDIQKAFPEIPQEISKRVLRFHLSSDPKTLNPALAMETSSTAVI
GDLFSGLTKLDLKTMKVKPNLAQGWEVREGGKVWIFYLRKDVKWSDGKPFTADDVVFTFNEVYLNDKIPTTARDIFTIKG
KKIKVRKIDEYTVEFILPEPFAPFLNSLGVEILPKHKLENYVKEGTFSTAWNVNTNPKEIVGTGAYKIEEYVKGQRVVYR
ANPYYYEKDENGNRLPYIKEKVGVIIPDPDTALLKFVNGEIDYIGVRAQDLLFLANQKDKDFVVYDLGATPSTTFLVFNQ
NPNAKIPKYKIKWFRDRTFRIAISHAIDREGIVKLVYNGLAQPLYTPITPANRPYYEESYYPKFEFNLKKARELLESIGF
KDRDGDGILEDPEGHDLEFTLITNAGNKEREMMGAIIKEDLRKIGIKVHFQPIDFNTLVSKLTSPPYEWEAVIIGLTGSI
DPHFGRNVWHSSGSLHMWYPRQKQPSTEWEKKVDELIDKGATELNYEKRVQIYREMFRIITEEQPMIFIAAPKSMVAVKK
HLKNVFPTVWGWYEPYRVYLISDR

Sequences:

>Translated_584_residues
MFALILAFLIMFLSFLPFHLLSSPKGEKLQIIKIIKLDIQKAFPEIPQEISKRVLRFHLSSDPKTLNPALAMETSSTAVI
GDLFSGLTKLDLKTMKVKPNLAQGWEVREGGKVWIFYLRKDVKWSDGKPFTADDVVFTFNEVYLNDKIPTTARDIFTIKG
KKIKVRKIDEYTVEFILPEPFAPFLNSLGVEILPKHKLENYVKEGTFSTAWNVNTNPKEIVGTGAYKIEEYVKGQRVVYR
ANPYYYEKDENGNRLPYIKEKVGVIIPDPDTALLKFVNGEIDYIGVRAQDLLFLANQKDKDFVVYDLGATPSTTFLVFNQ
NPNAKIPKYKIKWFRDRTFRIAISHAIDREGIVKLVYNGLAQPLYTPITPANRPYYEESYYPKFEFNLKKARELLESIGF
KDRDGDGILEDPEGHDLEFTLITNAGNKEREMMGAIIKEDLRKIGIKVHFQPIDFNTLVSKLTSPPYEWEAVIIGLTGSI
DPHFGRNVWHSSGSLHMWYPRQKQPSTEWEKKVDELIDKGATELNYEKRVQIYREMFRIITEEQPMIFIAAPKSMVAVKK
HLKNVFPTVWGWYEPYRVYLISDR
>Mature_584_residues
MFALILAFLIMFLSFLPFHLLSSPKGEKLQIIKIIKLDIQKAFPEIPQEISKRVLRFHLSSDPKTLNPALAMETSSTAVI
GDLFSGLTKLDLKTMKVKPNLAQGWEVREGGKVWIFYLRKDVKWSDGKPFTADDVVFTFNEVYLNDKIPTTARDIFTIKG
KKIKVRKIDEYTVEFILPEPFAPFLNSLGVEILPKHKLENYVKEGTFSTAWNVNTNPKEIVGTGAYKIEEYVKGQRVVYR
ANPYYYEKDENGNRLPYIKEKVGVIIPDPDTALLKFVNGEIDYIGVRAQDLLFLANQKDKDFVVYDLGATPSTTFLVFNQ
NPNAKIPKYKIKWFRDRTFRIAISHAIDREGIVKLVYNGLAQPLYTPITPANRPYYEESYYPKFEFNLKKARELLESIGF
KDRDGDGILEDPEGHDLEFTLITNAGNKEREMMGAIIKEDLRKIGIKVHFQPIDFNTLVSKLTSPPYEWEAVIIGLTGSI
DPHFGRNVWHSSGSLHMWYPRQKQPSTEWEKKVDELIDKGATELNYEKRVQIYREMFRIITEEQPMIFIAAPKSMVAVKK
HLKNVFPTVWGWYEPYRVYLISDR

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=551, Percent_Identity=25.2268602540835, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787762, Length=541, Percent_Identity=23.2902033271719, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789397, Length=538, Percent_Identity=23.6059479553903, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787052, Length=512, Percent_Identity=24.21875, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789887, Length=500, Percent_Identity=24.6, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787551, Length=560, Percent_Identity=24.1071428571429, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787495, Length=368, Percent_Identity=27.9891304347826, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87081878, Length=455, Percent_Identity=23.2967032967033, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 67510; Mature: 67510

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00093 N4_MTASE ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALILAFLIMFLSFLPFHLLSSPKGEKLQIIKIIKLDIQKAFPEIPQEISKRVLRFHLS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
SDPKTLNPALAMETSSTAVIGDLFSGLTKLDLKTMKVKPNLAQGWEVREGGKVWIFYLRK
CCCCCCCCEEEEECCCCHHHHHHHHCHHHCCEEEEEECCCCCCCCEECCCCCEEEEEEEE
DVKWSDGKPFTADDVVFTFNEVYLNDKIPTTARDIFTIKGKKIKVRKIDEYTVEFILPEP
CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCEEEEEEECCC
FAPFLNSLGVEILPKHKLENYVKEGTFSTAWNVNTNPKEIVGTGAYKIEEYVKGQRVVYR
HHHHHHHCCCEEECHHHHHHHHHCCCCCEEEECCCCHHHEEECCHHHHHHHHCCCEEEEE
ANPYYYEKDENGNRLPYIKEKVGVIIPDPDTALLKFVNGEIDYIGVRAQDLLFLANQKDK
CCCEEEECCCCCCCCCEEHHCCCEEECCCCHHHHHEECCCEEEEEECCEEEEEEECCCCC
DFVVYDLGATPSTTFLVFNQNPNAKIPKYKIKWFRDRTFRIAISHAIDREGIVKLVYNGL
CEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCEEEEEEEHHCCCCHHHHHHHHHH
AQPLYTPITPANRPYYEESYYPKFEFNLKKARELLESIGFKDRDGDGILEDPEGHDLEFT
CCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
LITNAGNKEREMMGAIIKEDLRKIGIKVHFQPIDFNTLVSKLTSPPYEWEAVIIGLTGSI
EEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCC
DPHFGRNVWHSSGSLHMWYPRQKQPSTEWEKKVDELIDKGATELNYEKRVQIYREMFRII
CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TEEQPMIFIAAPKSMVAVKKHLKNVFPTVWGWYEPYRVYLISDR
CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MFALILAFLIMFLSFLPFHLLSSPKGEKLQIIKIIKLDIQKAFPEIPQEISKRVLRFHLS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
SDPKTLNPALAMETSSTAVIGDLFSGLTKLDLKTMKVKPNLAQGWEVREGGKVWIFYLRK
CCCCCCCCEEEEECCCCHHHHHHHHCHHHCCEEEEEECCCCCCCCEECCCCCEEEEEEEE
DVKWSDGKPFTADDVVFTFNEVYLNDKIPTTARDIFTIKGKKIKVRKIDEYTVEFILPEP
CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCEEEEEEECCEEEEEEECCC
FAPFLNSLGVEILPKHKLENYVKEGTFSTAWNVNTNPKEIVGTGAYKIEEYVKGQRVVYR
HHHHHHHCCCEEECHHHHHHHHHCCCCCEEEECCCCHHHEEECCHHHHHHHHCCCEEEEE
ANPYYYEKDENGNRLPYIKEKVGVIIPDPDTALLKFVNGEIDYIGVRAQDLLFLANQKDK
CCCEEEECCCCCCCCCEEHHCCCEEECCCCHHHHHEECCCEEEEEECCEEEEEEECCCCC
DFVVYDLGATPSTTFLVFNQNPNAKIPKYKIKWFRDRTFRIAISHAIDREGIVKLVYNGL
CEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEECCEEEEEEEHHCCCCHHHHHHHHHH
AQPLYTPITPANRPYYEESYYPKFEFNLKKARELLESIGFKDRDGDGILEDPEGHDLEFT
CCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
LITNAGNKEREMMGAIIKEDLRKIGIKVHFQPIDFNTLVSKLTSPPYEWEAVIIGLTGSI
EEECCCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHCCCCCCEEEEEEEEECCC
DPHFGRNVWHSSGSLHMWYPRQKQPSTEWEKKVDELIDKGATELNYEKRVQIYREMFRII
CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TEEQPMIFIAAPKSMVAVKKHLKNVFPTVWGWYEPYRVYLISDR
CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]