Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

Click here to switch to the map view.

The map label for this gene is 15606613

Identifier: 15606613

GI number: 15606613

Start: 1021935

End: 1023788

Strand: Direct

Name: 15606613

Synonym: aq_1439

Alternate gene names: NA

Gene position: 1021935-1023788 (Clockwise)

Preceding gene: 15606612

Following gene: 15606614

Centisome position: 65.87

GC content: 35.92

Gene sequence:

>1854_bases
ATGAAGGGTTTTTCTCTTGTAAACACTATAGTCGCCACATTTATATTTACAGCTGTTGGGTTTGCATTACTCGTTATGTC
CGACGAAGGTTTCAGGATTACCAAGAGTAGTATAAACGCAAATATCGCGGAAGCTAATGCGGTGTATGCCTTGAACACAG
CCCTTGAACACCTTATAAACGGTGGAAATTGTGAAGGGAGTGCAAGTGGAAGTGTAAACGATGGTAGTTGGGAATACACT
TTATACCCAACTCCTTCAGGACAGTGTTTTATCTTAGCATCCGGCAGAAAAGATAACGCTGTTAGGTACAAAATCGCTTA
TGCGGGATTCAGTGGTGGCGGAGGATTGGGAGCATTAACTATTAATTATCTAAAAGGAGATGAATTTTCCTTACAGGGAA
GTTCAAAGATTTCTAACGGAGGAACGAATTGCCCTGCGGTAGTTTATTATGAGAAAAAAGCAGATATAGAATATAAAGGA
AATGCAAAAATTGAAGGAGGTATAGTAAATAAAAAAATAAACATACCAAGCGAAATATTCAAGGAAGAGAATGCTTTTGA
AGATATAAAGACCTACTATAAGGAGTTATACGAGGATAGGTTTAATAATGTTTCTCTTCCTGACGTACCCTTAACTACCG
AAGACTGTACTCTTGAGGTTGGAAATTCTGATTGTTCTTTGAAAAATAATGAAATTAATTGTGGAAACACGAAGTTAACT
GTGGAAAACTGCACAAGTGTCCTTATTAAGGGAGGAAAAATATCCCTGAACATAAATAATGGCGAATTAGACATACCTTT
AGTGATAGAATCGGACGAGCTTGTTTCACTTACAACGGTGGGTGATACAAGCATTAACGACATATATGTAATAACAAAAA
CTTTCGGGAAATTAGAAACAGGGGGATCAACAACTATAAACGGTAACGTTGTTATTAAAGCGGATAGTTTTAAAAACCTT
GGAGAAGACGAACAAAATATTGTCCTAAGTGGAAGTACAAAAGTAGAAGGAGGTATGTACATATCAACTCAAGATAGCTC
TCTTCCATCTTCTGGAAATGAAGCTAAAATAAAATTCGCTGGAAGCTCAGAAATAGGGGAGAACTTTTACTTTTTAGGAT
ACGGTGTGGATTTACATTATACAGGTGGCAGTGGAATAAGCGGAAATATCTATATAAAAACCTATCACGAATATGAGCTT
GATATTAGCCACTATGGGAACTTTGTAGGGGGAAGTATTTATGCAAACTGTGTATCTTCGGATTGTGAAGGGGAAGTTGA
AATACACAATGGAAACTTAAAACCCGCAGAGGGAAGTGAATTTGTGTTTCTAAGTGAAGGTAAAGAATTAGAGGCGGAGT
TGAAGTCAGGTTCAGGAGGATTAGATGGGTATTTTGTTAATTTATCCGATAATGGGGAACTTAAACTTGAAATTAAAGCC
GGAGGACTTGAAGCGAATGGATTATTCATAGGAAATAAAATAGAAATTGAAGGAGGGGAAAAAGAAAAATTAACAGGTAG
TAATAAGATAAACGGAATTTTAGTTGGAAAAATTGTTGAAGGTCTAAAATTAGGAGGAAGTGCAGAAATAAACGGGTTAG
TTGCTGCACTTGAGGAATTTGATGAATTAAATCTAAAAGGAAGATCAAAAATAAAAGGAATGGTTATAGGAAATATACTA
GAAGGTTCCGTTTCCTTAATTGGTAATTCTGAAATAACCCTTGATTTCGAAACGATAAATTCCTTTATTTCTAAATTTGG
ATTGGAGGACTTCTTTAAAACACTTACTTGTGAAAGTGAAAAAGGCAGTGGAAATCTAACCCTCCCACAACACTTAGTAG
GTTCAATATACTAA

Upstream 100 bases:

>100_bases
GGAGAATGTACAGCGGTAAGGTTTCGTATAACCTTCGTAAACAGAGTAGGCAACGAAGAATACACGCTTACGAAGGACAT
AGTTCTCGGGAGGTAATGAA

Downstream 100 bases:

>100_bases
CATTGTATGTTCGCCTTGATTTTGGCTTTCCTTATTATGTTTCTATCCTTCCTTCCCTTTCACCTTCTTTCTTCTCCTAA
AGGTGAAAAACTTCAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MKGFSLVNTIVATFIFTAVGFALLVMSDEGFRITKSSINANIAEANAVYALNTALEHLINGGNCEGSASGSVNDGSWEYT
LYPTPSGQCFILASGRKDNAVRYKIAYAGFSGGGGLGALTINYLKGDEFSLQGSSKISNGGTNCPAVVYYEKKADIEYKG
NAKIEGGIVNKKINIPSEIFKEENAFEDIKTYYKELYEDRFNNVSLPDVPLTTEDCTLEVGNSDCSLKNNEINCGNTKLT
VENCTSVLIKGGKISLNINNGELDIPLVIESDELVSLTTVGDTSINDIYVITKTFGKLETGGSTTINGNVVIKADSFKNL
GEDEQNIVLSGSTKVEGGMYISTQDSSLPSSGNEAKIKFAGSSEIGENFYFLGYGVDLHYTGGSGISGNIYIKTYHEYEL
DISHYGNFVGGSIYANCVSSDCEGEVEIHNGNLKPAEGSEFVFLSEGKELEAELKSGSGGLDGYFVNLSDNGELKLEIKA
GGLEANGLFIGNKIEIEGGEKEKLTGSNKINGILVGKIVEGLKLGGSAEINGLVAALEEFDELNLKGRSKIKGMVIGNIL
EGSVSLIGNSEITLDFETINSFISKFGLEDFFKTLTCESEKGSGNLTLPQHLVGSIY

Sequences:

>Translated_617_residues
MKGFSLVNTIVATFIFTAVGFALLVMSDEGFRITKSSINANIAEANAVYALNTALEHLINGGNCEGSASGSVNDGSWEYT
LYPTPSGQCFILASGRKDNAVRYKIAYAGFSGGGGLGALTINYLKGDEFSLQGSSKISNGGTNCPAVVYYEKKADIEYKG
NAKIEGGIVNKKINIPSEIFKEENAFEDIKTYYKELYEDRFNNVSLPDVPLTTEDCTLEVGNSDCSLKNNEINCGNTKLT
VENCTSVLIKGGKISLNINNGELDIPLVIESDELVSLTTVGDTSINDIYVITKTFGKLETGGSTTINGNVVIKADSFKNL
GEDEQNIVLSGSTKVEGGMYISTQDSSLPSSGNEAKIKFAGSSEIGENFYFLGYGVDLHYTGGSGISGNIYIKTYHEYEL
DISHYGNFVGGSIYANCVSSDCEGEVEIHNGNLKPAEGSEFVFLSEGKELEAELKSGSGGLDGYFVNLSDNGELKLEIKA
GGLEANGLFIGNKIEIEGGEKEKLTGSNKINGILVGKIVEGLKLGGSAEINGLVAALEEFDELNLKGRSKIKGMVIGNIL
EGSVSLIGNSEITLDFETINSFISKFGLEDFFKTLTCESEKGSGNLTLPQHLVGSIY
>Mature_617_residues
MKGFSLVNTIVATFIFTAVGFALLVMSDEGFRITKSSINANIAEANAVYALNTALEHLINGGNCEGSASGSVNDGSWEYT
LYPTPSGQCFILASGRKDNAVRYKIAYAGFSGGGGLGALTINYLKGDEFSLQGSSKISNGGTNCPAVVYYEKKADIEYKG
NAKIEGGIVNKKINIPSEIFKEENAFEDIKTYYKELYEDRFNNVSLPDVPLTTEDCTLEVGNSDCSLKNNEINCGNTKLT
VENCTSVLIKGGKISLNINNGELDIPLVIESDELVSLTTVGDTSINDIYVITKTFGKLETGGSTTINGNVVIKADSFKNL
GEDEQNIVLSGSTKVEGGMYISTQDSSLPSSGNEAKIKFAGSSEIGENFYFLGYGVDLHYTGGSGISGNIYIKTYHEYEL
DISHYGNFVGGSIYANCVSSDCEGEVEIHNGNLKPAEGSEFVFLSEGKELEAELKSGSGGLDGYFVNLSDNGELKLEIKA
GGLEANGLFIGNKIEIEGGEKEKLTGSNKINGILVGKIVEGLKLGGSAEINGLVAALEEFDELNLKGRSKIKGMVIGNIL
EGSVSLIGNSEITLDFETINSFISKFGLEDFFKTLTCESEKGSGNLTLPQHLVGSIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1439_AQUAE (O67428)

Other databases:

- EMBL:   AE000657
- PIR:   B70425
- RefSeq:   NP_213993.1
- GeneID:   1192959
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1439
- NMPDR:   fig|224324.1.peg.1008
- BioCyc:   AAEO224324:AQ_1439-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65819; Mature: 65819

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd0b9450)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFSLVNTIVATFIFTAVGFALLVMSDEGFRITKSSINANIAEANAVYALNTALEHLIN
CCCHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCEEECCCEEEEEHHHHHHHHC
GGNCEGSASGSVNDGSWEYTLYPTPSGQCFILASGRKDNAVRYKIAYAGFSGGGGLGALT
CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEE
INYLKGDEFSLQGSSKISNGGTNCPAVVYYEKKADIEYKGNAKIEGGIVNKKINIPSEIF
EEEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCEEEEEECCCHHHH
KEENAFEDIKTYYKELYEDRFNNVSLPDVPLTTEDCTLEVGNSDCSLKNNEINCGNTKLT
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECCEECCCCEEEE
VENCTSVLIKGGKISLNINNGELDIPLVIESDELVSLTTVGDTSINDIYVITKTFGKLET
HHHCCEEEEECCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEC
GGSTTINGNVVIKADSFKNLGEDEQNIVLSGSTKVEGGMYISTQDSSLPSSGNEAKIKFA
CCCEEECCEEEEEECCCCCCCCCCCCEEEECCCEECCCEEEEECCCCCCCCCCCEEEEEC
GSSEIGENFYFLGYGVDLHYTGGSGISGNIYIKTYHEYELDISHYGNFVGGSIYANCVSS
CCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEHHHCCCCCCCCEEEEEECC
DCEGEVEIHNGNLKPAEGSEFVFLSEGKELEAELKSGSGGLDGYFVNLSDNGELKLEIKA
CCCCEEEEECCCCCCCCCCEEEEEECCCCEEHHCCCCCCCCCEEEEEECCCCEEEEEEEE
GGLEANGLFIGNKIEIEGGEKEKLTGSNKINGILVGKIVEGLKLGGSAEINGLVAALEEF
CCEEECCEEECCEEEECCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHH
DELNLKGRSKIKGMVIGNILEGSVSLIGNSEITLDFETINSFISKFGLEDFFKTLTCESE
HHCCCCCCCCCCEEEEEEEECCEEEEEECCEEEEEHHHHHHHHHHHCHHHHHHHHCCCCC
KGSGNLTLPQHLVGSIY
CCCCCCCCHHHHHCCCH
>Mature Secondary Structure
MKGFSLVNTIVATFIFTAVGFALLVMSDEGFRITKSSINANIAEANAVYALNTALEHLIN
CCCHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCEEECCCEEEEEHHHHHHHHC
GGNCEGSASGSVNDGSWEYTLYPTPSGQCFILASGRKDNAVRYKIAYAGFSGGGGLGALT
CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEEEECCCCCCEEEEE
INYLKGDEFSLQGSSKISNGGTNCPAVVYYEKKADIEYKGNAKIEGGIVNKKINIPSEIF
EEEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCEEEEEECCCHHHH
KEENAFEDIKTYYKELYEDRFNNVSLPDVPLTTEDCTLEVGNSDCSLKNNEINCGNTKLT
HCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEECCEECCCCEEEE
VENCTSVLIKGGKISLNINNGELDIPLVIESDELVSLTTVGDTSINDIYVITKTFGKLET
HHHCCEEEEECCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCEEC
GGSTTINGNVVIKADSFKNLGEDEQNIVLSGSTKVEGGMYISTQDSSLPSSGNEAKIKFA
CCCEEECCEEEEEECCCCCCCCCCCCEEEECCCEECCCEEEEECCCCCCCCCCCEEEEEC
GSSEIGENFYFLGYGVDLHYTGGSGISGNIYIKTYHEYELDISHYGNFVGGSIYANCVSS
CCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEHHHCCCCCCCCEEEEEECC
DCEGEVEIHNGNLKPAEGSEFVFLSEGKELEAELKSGSGGLDGYFVNLSDNGELKLEIKA
CCCCEEEEECCCCCCCCCCEEEEEECCCCEEHHCCCCCCCCCEEEEEECCCCEEEEEEEE
GGLEANGLFIGNKIEIEGGEKEKLTGSNKINGILVGKIVEGLKLGGSAEINGLVAALEEF
CCEEECCEEECCEEEECCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHH
DELNLKGRSKIKGMVIGNILEGSVSLIGNSEITLDFETINSFISKFGLEDFFKTLTCESE
HHCCCCCCCCCCEEEEEEEECCEEEEEECCEEEEEHHHHHHHHHHHCHHHHHHHHCCCCC
KGSGNLTLPQHLVGSIY
CCCCCCCCHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320