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The map label for this gene is yedF [C]

Identifier: 15606600

GI number: 15606600

Start: 1012351

End: 1012944

Strand: Direct

Name: yedF [C]

Synonym: aq_1421

Alternate gene names: 15606600

Gene position: 1012351-1012944 (Clockwise)

Preceding gene: 15606596

Following gene: 15606602

Centisome position: 65.26

GC content: 44.44

Gene sequence:

>594_bases
ATGGAAAACGTAAAGGAAGACAGGACCTTGGATCTATCTGGGCTCAGTTGTCCTCTCCCTGTCGTTATGACATCTGAAAC
GATGAGAAAAATGGAAGAAGGGCAGGTTTTAAAGGTGATTTCCACGGATCCGGGTTTTGAGAGGGATATATGGAGCTGGG
CAAAGCAAAGTGGGAATATACTTCTCAAGGTTGAGAAAGAAGACGGAAAGACGATAGCTTACATAAAGAAGGCAAGCGAG
GCACACGAGCCATCACTCTGGTACTGGATAAAGTTCCACTCCTTAGGTGTAAAGCTCCACATAAGGCAGTTCTGTATACA
GATAAACCCCTTCGTAAAGAAACCCACGCACTTTATAACCTTCAGTGCCATCTCCGAAGGAACGAGGGCTGAAAAAGAAC
TGAAAAAACTCGGTGAGAAAGATGCAGTTCTGATACCAATTCCGGATGAAATAGACCCGAGGTGCGGAGTTGTTCTCGCT
GTTCACGGCGAGAAAAAGGCAAGGGAGATTTACGAAAAGTTAAAGGATATGGACATAGCGGTTGAAGCCATTTACGAAAA
GAAAGGAAAAGAGTACGAGAGAGTTTACCCTTAA

Upstream 100 bases:

>100_bases
GTTTTTCAGAACTACTTCCTTGGTCTTCGGTGTGCATCCCCCCACAAGGATAAGTATTATTGTTAAAAAAAGCAGCATTT
TACTTTAGATTATATATCCT

Downstream 100 bases:

>100_bases
GCCCTCGCTAAGTTCTTCCTCTTTTTGTAAACGAATTCTTTTAAGCCTTCTAAATCAAAGGTATTTATTACTTTATCTGG
CGTAGCCCAACCTCTCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MENVKEDRTLDLSGLSCPLPVVMTSETMRKMEEGQVLKVISTDPGFERDIWSWAKQSGNILLKVEKEDGKTIAYIKKASE
AHEPSLWYWIKFHSLGVKLHIRQFCIQINPFVKKPTHFITFSAISEGTRAEKELKKLGEKDAVLIPIPDEIDPRCGVVLA
VHGEKKAREIYEKLKDMDIAVEAIYEKKGKEYERVYP

Sequences:

>Translated_197_residues
MENVKEDRTLDLSGLSCPLPVVMTSETMRKMEEGQVLKVISTDPGFERDIWSWAKQSGNILLKVEKEDGKTIAYIKKASE
AHEPSLWYWIKFHSLGVKLHIRQFCIQINPFVKKPTHFITFSAISEGTRAEKELKKLGEKDAVLIPIPDEIDPRCGVVLA
VHGEKKAREIYEKLKDMDIAVEAIYEKKGKEYERVYP
>Mature_197_residues
MENVKEDRTLDLSGLSCPLPVVMTSETMRKMEEGQVLKVISTDPGFERDIWSWAKQSGNILLKVEKEDGKTIAYIKKASE
AHEPSLWYWIKFHSLGVKLHIRQFCIQINPFVKKPTHFITFSAISEGTRAEKELKKLGEKDAVLIPIPDEIDPRCGVVLA
VHGEKKAREIYEKLKDMDIAVEAIYEKKGKEYERVYP

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1421_AQUAE (O67415)

Other databases:

- EMBL:   AE000657
- PIR:   E70423
- RefSeq:   NP_213980.1
- ProteinModelPortal:   O67415
- SMR:   O67415
- GeneID:   1192946
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_1421
- NMPDR:   fig|224324.1.peg.995
- HOGENOM:   HBG507509
- OMA:   IERGKGF
- PhylomeDB:   O67415
- ProtClustDB:   CLSK2299694
- BioCyc:   AAEO224324:AQ_1421-MONOMER
- GO:   GO:0005737
- InterPro:   IPR021778
- InterPro:   IPR001455
- Gene3D:   G3DSA:3.30.110.40

Pfam domain/function: PF11823 DUF3343; PF01206 SirA; SSF64307 SirA_like

EC number: NA

Molecular weight: Translated: 22605; Mature: 22605

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVKEDRTLDLSGLSCPLPVVMTSETMRKMEEGQVLKVISTDPGFERDIWSWAKQSGNI
CCCCCCCCEEECCCCCCCCCEEECHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCE
LLKVEKEDGKTIAYIKKASEAHEPSLWYWIKFHSLGVKLHIRQFCIQINPFVKKPTHFIT
EEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEHHHHHCCCCCCCCCEEEE
FSAISEGTRAEKELKKLGEKDAVLIPIPDEIDPRCGVVLAVHGEKKAREIYEKLKDMDIA
EECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
VEAIYEKKGKEYERVYP
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MENVKEDRTLDLSGLSCPLPVVMTSETMRKMEEGQVLKVISTDPGFERDIWSWAKQSGNI
CCCCCCCCEEECCCCCCCCCEEECHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCE
LLKVEKEDGKTIAYIKKASEAHEPSLWYWIKFHSLGVKLHIRQFCIQINPFVKKPTHFIT
EEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEHHHHHCCCCCCCCCEEEE
FSAISEGTRAEKELKKLGEKDAVLIPIPDEIDPRCGVVLAVHGEKKAREIYEKLKDMDIA
EECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
VEAIYEKKGKEYERVYP
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320