Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is yhjQ [C]

Identifier: 15606589

GI number: 15606589

Start: 999493

End: 1000227

Strand: Direct

Name: yhjQ [C]

Synonym: aq_1404

Alternate gene names: 15606589

Gene position: 999493-1000227 (Clockwise)

Preceding gene: 15606588

Following gene: 15606592

Centisome position: 64.43

GC content: 42.04

Gene sequence:

>735_bases
ATGATTATTCCAGTACTTTCCTCAAAAGGAGGAGTGGGTAAGACAACTATAGCCACAAATTTAGCCTACACACTTTCCAA
GAAAGCAAAAACCGTTTTGATAGACACGGATCCCCAAAACGGAGTGGCTTCCGTTTTGTGCAAGCGTCACGATATCGGAC
TTGCGGACATACTACTCGAAGGAACAAATTACGGGGAAACCCTCCGGCAGGTAAGGGAAAACTTTTTTATAATACCTACG
GGTGCAAAAGCTATAGAGAATGAGTTTTCCTTTAATGAAAGTTTTAAGTACGAAAATATTCAAAACCTCTGTCTTAAACT
CGAATCAGAAGGAGGATTTGAGTTTATTCTTTTCGACACACCTCCGGGGTATACGGTTCAGTCAAACGTACTCATGAAGT
TGGCAGATGTAATTCTTGCGGTGTTCGAAGCTGAACCCGCTTCCTACGCTTCTTTCAAGGTGTTCGAAACGCATATGTTT
ACAAAGGAAAAAGAAATTAGGGAAAAGTTGTGGTTAATAATAAACAAAGTAAGGGCTTCGGAAATAAGCGAAGATTTTTC
ATTCATTTTCAGGTACGAGGCCGGAGGGAACATCCTCGCCTACCTTCCTTACGACGAAGCCGTGTCCGTAGCCTCGGGGG
AGTGCCTGCTCGTTGAGGAGTACAAACCTGACTCTCCTTTTGTCAAGCTCATGTATGAATTAGTTGAGAAATTATTGACA
CTCCTTAAAAAATGA

Upstream 100 bases:

>100_bases
ACGACGAAGTTTCTTTAAACATGGGAGTAAAATACTACTTCAACGGTCTTGAAAGCCCATTCAGGTCTACGGTGGATAAA
GTAGACGAGAGGTTGTTCAA

Downstream 100 bases:

>100_bases
GTTTTAACCTCAAAACTTTGTTTCTGTAAGTAACGCTTGCGTAGTCTACCGCCTTTATACCCTTTACTTTTCCGTTTTTA
AAGCCCTCAAGCTCGAGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MIIPVLSSKGGVGKTTIATNLAYTLSKKAKTVLIDTDPQNGVASVLCKRHDIGLADILLEGTNYGETLRQVRENFFIIPT
GAKAIENEFSFNESFKYENIQNLCLKLESEGGFEFILFDTPPGYTVQSNVLMKLADVILAVFEAEPASYASFKVFETHMF
TKEKEIREKLWLIINKVRASEISEDFSFIFRYEAGGNILAYLPYDEAVSVASGECLLVEEYKPDSPFVKLMYELVEKLLT
LLKK

Sequences:

>Translated_244_residues
MIIPVLSSKGGVGKTTIATNLAYTLSKKAKTVLIDTDPQNGVASVLCKRHDIGLADILLEGTNYGETLRQVRENFFIIPT
GAKAIENEFSFNESFKYENIQNLCLKLESEGGFEFILFDTPPGYTVQSNVLMKLADVILAVFEAEPASYASFKVFETHMF
TKEKEIREKLWLIINKVRASEISEDFSFIFRYEAGGNILAYLPYDEAVSVASGECLLVEEYKPDSPFVKLMYELVEKLLT
LLKK
>Mature_244_residues
MIIPVLSSKGGVGKTTIATNLAYTLSKKAKTVLIDTDPQNGVASVLCKRHDIGLADILLEGTNYGETLRQVRENFFIIPT
GAKAIENEFSFNESFKYENIQNLCLKLESEGGFEFILFDTPPGYTVQSNVLMKLADVILAVFEAEPASYASFKVFETHMF
TKEKEIREKLWLIINKVRASEISEDFSFIFRYEAGGNILAYLPYDEAVSVASGECLLVEEYKPDSPFVKLMYELVEKLLT
LLKK

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27412; Mature: 27412

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPVLSSKGGVGKTTIATNLAYTLSKKAKTVLIDTDPQNGVASVLCKRHDIGLADILLE
CEEEEECCCCCCCCHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHCCCCHHHEEEE
GTNYGETLRQVRENFFIIPTGAKAIENEFSFNESFKYENIQNLCLKLESEGGFEFILFDT
CCCHHHHHHHHHHCEEEEECCHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEEEEEEC
PPGYTVQSNVLMKLADVILAVFEAEPASYASFKVFETHMFTKEKEIREKLWLIINKVRAS
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
EISEDFSFIFRYEAGGNILAYLPYDEAVSVASGECLLVEEYKPDSPFVKLMYELVEKLLT
HHHCCEEEEEEEECCCCEEEEECCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
LLKK
HHCC
>Mature Secondary Structure
MIIPVLSSKGGVGKTTIATNLAYTLSKKAKTVLIDTDPQNGVASVLCKRHDIGLADILLE
CEEEEECCCCCCCCHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHCCCCHHHEEEE
GTNYGETLRQVRENFFIIPTGAKAIENEFSFNESFKYENIQNLCLKLESEGGFEFILFDT
CCCHHHHHHHHHHCEEEEECCHHHHHHCCCCCCCCCCCCHHHHHEEEECCCCEEEEEEEC
PPGYTVQSNVLMKLADVILAVFEAEPASYASFKVFETHMFTKEKEIREKLWLIINKVRAS
CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
EISEDFSFIFRYEAGGNILAYLPYDEAVSVASGECLLVEEYKPDSPFVKLMYELVEKLLT
HHHCCEEEEEEEECCCCEEEEECCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
LLKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8932323; 9403685 [H]