| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is bscS [H]
Identifier: 15606588
GI number: 15606588
Start: 998504
End: 999496
Strand: Direct
Name: bscS [H]
Synonym: aq_1403
Alternate gene names: 15606588
Gene position: 998504-999496 (Clockwise)
Preceding gene: 15606587
Following gene: 15606589
Centisome position: 64.36
GC content: 44.21
Gene sequence:
>993_bases ATGGACAAGTTAATACACACGAGCGTTTACCTGAACGCAGAAAAGAAGTTAGCGAGGGGGTTTTATCTGTGGACGGAAAA CGATTTAATATTTCTCGATTCTGGCGGTAAACCTGACTACACGCACTTCGGTGGTATAAATCTTCCCGTTATAAGGGACA CGGATACTTCTTTTATAGGAATTGAGCCTATGGTAGGTGTAAGAGTTGGAAGGAAGAGTTACCTTAAACTCGGGATAGGC TCCACGCCCTTCGGAAACTCAAAGGTTCGTCCCACGTTTAGGGGAATATTCGAGGCAAATTACAGGGAAGAGGACATACT CCTCAGACTTACACTGAAACGGGACAGTGTAAGGGATTCCCTACTTTCCTACGTCGGGGCAAAGGATCCCCACGCAGACA GGGAATGGGGGCGCGTTGTGGAACAGGGAGGAGAGGTTAAGTTCCAGCTCGGTAGCGGATACAGAGAAAGCTTCCTTTCT TTGAAAGGCGGTTATTACGACATAGAAGGTAAGAACGTGAACGACAATTCAAGGTACTTTCTGGAAATTTATCCTTCCCT TTACCTCGGTAATTTACTGATAGACGAAAACTACTTAGGTCTCTTCTTCAGGTACGAGAACTACGATAAGAACGAAAATC TGTTTTACTTTGGAAACGGAGGTTACTTCAGTCCGAAAAACTTTGTACTTTTAGGGCCAAAGTACACCGGTTACTTTTAC ACGGACAGGTTGATGTTCAGGCTGAATCTTCTTCTGGGATTCCTGAGGTTTGAAACGGACGGTGATACGACGAACACTCT TGCTGCAGACATCTCGGGAGAGTTTGAGTATAAGCTGAAGGAGAAAATATCACTTATAGGTGGCTTGGGCTACAGAAATT CAAAGGATTACGACGAAGTTTCTTTAAACATGGGAGTAAAATACTACTTCAACGGTCTTGAAAGCCCATTCAGGTCTACG GTGGATAAAGTAGACGAGAGGTTGTTCAAATGA
Upstream 100 bases:
>100_bases TTTCGGAGCTTGAAGAGAAGATAAAGGAGGCGAAGAAAAAGGAAAACACGGACTTTATAGAGTCGGGTATACAGTTCAGT CAAAATCGGGAAGAAAAGGT
Downstream 100 bases:
>100_bases TTATTCCAGTACTTTCCTCAAAAGGAGGAGTGGGTAAGACAACTATAGCCACAAATTTAGCCTACACACTTTCCAAGAAA GCAAAAACCGTTTTGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MDKLIHTSVYLNAEKKLARGFYLWTENDLIFLDSGGKPDYTHFGGINLPVIRDTDTSFIGIEPMVGVRVGRKSYLKLGIG STPFGNSKVRPTFRGIFEANYREEDILLRLTLKRDSVRDSLLSYVGAKDPHADREWGRVVEQGGEVKFQLGSGYRESFLS LKGGYYDIEGKNVNDNSRYFLEIYPSLYLGNLLIDENYLGLFFRYENYDKNENLFYFGNGGYFSPKNFVLLGPKYTGYFY TDRLMFRLNLLLGFLRFETDGDTTNTLAADISGEFEYKLKEKISLIGGLGYRNSKDYDEVSLNMGVKYYFNGLESPFRST VDKVDERLFK
Sequences:
>Translated_330_residues MDKLIHTSVYLNAEKKLARGFYLWTENDLIFLDSGGKPDYTHFGGINLPVIRDTDTSFIGIEPMVGVRVGRKSYLKLGIG STPFGNSKVRPTFRGIFEANYREEDILLRLTLKRDSVRDSLLSYVGAKDPHADREWGRVVEQGGEVKFQLGSGYRESFLS LKGGYYDIEGKNVNDNSRYFLEIYPSLYLGNLLIDENYLGLFFRYENYDKNENLFYFGNGGYFSPKNFVLLGPKYTGYFY TDRLMFRLNLLLGFLRFETDGDTTNTLAADISGEFEYKLKEKISLIGGLGYRNSKDYDEVSLNMGVKYYFNGLESPFRST VDKVDERLFK >Mature_330_residues MDKLIHTSVYLNAEKKLARGFYLWTENDLIFLDSGGKPDYTHFGGINLPVIRDTDTSFIGIEPMVGVRVGRKSYLKLGIG STPFGNSKVRPTFRGIFEANYREEDILLRLTLKRDSVRDSLLSYVGAKDPHADREWGRVVEQGGEVKFQLGSGYRESFLS LKGGYYDIEGKNVNDNSRYFLEIYPSLYLGNLLIDENYLGLFFRYENYDKNENLFYFGNGGYFSPKNFVLLGPKYTGYFY TDRLMFRLNLLLGFLRFETDGDTTNTLAADISGEFEYKLKEKISLIGGLGYRNSKDYDEVSLNMGVKYYFNGLESPFRST VDKVDERLFK
Specific function: Required for maximal bacterial cellulose synthesis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 10 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008410 - InterPro: IPR003921 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF05420 BCSC_C [H]
EC number: NA
Molecular weight: Translated: 37954; Mature: 37954
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLIHTSVYLNAEKKLARGFYLWTENDLIFLDSGGKPDYTHFGGINLPVIRDTDTSFIG CCCEEEEEEEEECCHHHHCEEEEEECCCEEEEECCCCCCCEEECCEEEEEEECCCCCEEE IEPMVGVRVGRKSYLKLGIGSTPFGNSKVRPTFRGIFEANYREEDILLRLTLKRDSVRDS CCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHEECCCCCCEEEEEEEECCHHHHHH LLSYVGAKDPHADREWGRVVEQGGEVKFQLGSGYRESFLSLKGGYYDIEGKNVNDNSRYF HHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCEEE LEIYPSLYLGNLLIDENYLGLFFRYENYDKNENLFYFGNGGYFSPKNFVLLGPKYTGYFY EEECCCHHCCCEEEECCCEEEEEEEECCCCCCCEEEEECCCEECCCCEEEECCCCCCEEE TDRLMFRLNLLLGFLRFETDGDTTNTLAADISGEFEYKLKEKISLIGGLGYRNSKDYDEV HHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCEE SLNMGVKYYFNGLESPFRSTVDKVDERLFK EEECCEEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDKLIHTSVYLNAEKKLARGFYLWTENDLIFLDSGGKPDYTHFGGINLPVIRDTDTSFIG CCCEEEEEEEEECCHHHHCEEEEEECCCEEEEECCCCCCCEEECCEEEEEEECCCCCEEE IEPMVGVRVGRKSYLKLGIGSTPFGNSKVRPTFRGIFEANYREEDILLRLTLKRDSVRDS CCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHEECCCCCCEEEEEEEECCHHHHHH LLSYVGAKDPHADREWGRVVEQGGEVKFQLGSGYRESFLSLKGGYYDIEGKNVNDNSRYF HHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCEEE LEIYPSLYLGNLLIDENYLGLFFRYENYDKNENLFYFGNGGYFSPKNFVLLGPKYTGYFY EEECCCHHCCCEEEECCCEEEEEEEECCCCCCCEEEEECCCEECCCCEEEECCCCCCEEE TDRLMFRLNLLLGFLRFETDGDTTNTLAADISGEFEYKLKEKISLIGGLGYRNSKDYDEV HHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCEE SLNMGVKYYFNGLESPFRSTVDKVDERLFK EEECCEEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12019221 [H]