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The map label for this gene is ylbK [H]

Identifier: 15606577

GI number: 15606577

Start: 984987

End: 985766

Strand: Direct

Name: ylbK [H]

Synonym: aq_1386

Alternate gene names: 15606577

Gene position: 984987-985766 (Clockwise)

Preceding gene: 15606576

Following gene: 15606578

Centisome position: 63.49

GC content: 43.97

Gene sequence:

>780_bases
TTGATTGGCAATTTGAAATTGAAGAGGTTTGAAGAGGTTAACTTAGTTCTTTCGGGAGGGGCTGCCAAGGGTATCGCCCA
TATAGGTGTTTTAAAAGCTCTGGAAGAGCTCGGTATAAAGGTAAAGAGGCTCAGCGGGGTAAGTGCTGGAGCTATCGTTT
CCGTCTTTTACGCTTCGGGCTACACTCCCGACGAGATGTTAAAACTCCTGAAAGAGGTAAACTGGCTCAAACTTTTTAAG
TTCAAAACACCGAAAATGGGCTTAATGGGGTGGGAGAAGGCTGCAGAGTTTTTGGAAAAAGAGCTCGGAGTTAAGAGGCT
GGAAGACCTGAACATACCAACCTATCTTTGCTCGGCGGATCTGTACACGGGAAAGGCTCTTTACTTCGGCAGAGGTGACT
TAATTCCCGTGCTTCTCGGAAGTTGTTCCATACCCGGGATTTTTGAACCAGTTGAGTACGAGAATTTTCTACTTGTTGAC
GGAGGTATAGTGAACAACCTGCCCGTAGAACCTTTGGAAAAGTTCAAAGAACCCATAATCGGGGTAGATGTGCTTCCCAT
AACTCAAGAAAGAAAGATTAAAAATATACTCCACATCCTTATAAGGAGCTTCTTTCTGGCGGTTCGTTCCAATTCGGAAA
AGAGAAAGGAGTTCTGCAACGTAGTTATAGAACCTCCCCTTGAAGAGTTCTCTCCTCTGGACGTAAATAAGGCGGACGAG
ATATTCCTGCGGGGATATGAGAGCACTTTAAGAATTATGAGAAATTTCGTAAAACATTAA

Upstream 100 bases:

>100_bases
GTTGTTTACAGGTATTTGGGAGTGTTCGGTTTTATAGAAATGTTCATATTCATATTCATACTTACATACGGATTGCTGTA
CGCATGGAAGAAAGGAGCAC

Downstream 100 bases:

>100_bases
GAAAAATTTATATAAAATTTCATTTATGGATTGTAAAGAGCTTGCGAGGATTTTTTACGCCCTTTCGGAGCCAAAGAGGC
TCTGTATGGTGAAGTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MIGNLKLKRFEEVNLVLSGGAAKGIAHIGVLKALEELGIKVKRLSGVSAGAIVSVFYASGYTPDEMLKLLKEVNWLKLFK
FKTPKMGLMGWEKAAEFLEKELGVKRLEDLNIPTYLCSADLYTGKALYFGRGDLIPVLLGSCSIPGIFEPVEYENFLLVD
GGIVNNLPVEPLEKFKEPIIGVDVLPITQERKIKNILHILIRSFFLAVRSNSEKRKEFCNVVIEPPLEEFSPLDVNKADE
IFLRGYESTLRIMRNFVKH

Sequences:

>Translated_259_residues
MIGNLKLKRFEEVNLVLSGGAAKGIAHIGVLKALEELGIKVKRLSGVSAGAIVSVFYASGYTPDEMLKLLKEVNWLKLFK
FKTPKMGLMGWEKAAEFLEKELGVKRLEDLNIPTYLCSADLYTGKALYFGRGDLIPVLLGSCSIPGIFEPVEYENFLLVD
GGIVNNLPVEPLEKFKEPIIGVDVLPITQERKIKNILHILIRSFFLAVRSNSEKRKEFCNVVIEPPLEEFSPLDVNKADE
IFLRGYESTLRIMRNFVKH
>Mature_259_residues
MIGNLKLKRFEEVNLVLSGGAAKGIAHIGVLKALEELGIKVKRLSGVSAGAIVSVFYASGYTPDEMLKLLKEVNWLKLFK
FKTPKMGLMGWEKAAEFLEKELGVKRLEDLNIPTYLCSADLYTGKALYFGRGDLIPVLLGSCSIPGIFEPVEYENFLLVD
GGIVNNLPVEPLEKFKEPIIGVDVLPITQERKIKNILHILIRSFFLAVRSNSEKRKEFCNVVIEPPLEEFSPLDVNKADE
IFLRGYESTLRIMRNFVKH

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=273, Percent_Identity=24.5421245421245, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI260656037, Length=273, Percent_Identity=24.5421245421245, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI260656041, Length=273, Percent_Identity=24.5421245421245, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI116256487, Length=273, Percent_Identity=24.5421245421245, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI260656039, Length=273, Percent_Identity=24.5421245421245, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI148727290, Length=276, Percent_Identity=27.1739130434783, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI148727335, Length=276, Percent_Identity=27.1739130434783, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI226510936, Length=176, Percent_Identity=29.5454545454545, Blast_Score=91, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6323581, Length=279, Percent_Identity=28.3154121863799, Blast_Score=96, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28571388, Length=270, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281376913, Length=270, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29100; Mature: 29100

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNLKLKRFEEVNLVLSGGAAKGIAHIGVLKALEELGIKVKRLSGVSAGAIVSVFYASG
CCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCC
YTPDEMLKLLKEVNWLKLFKFKTPKMGLMGWEKAAEFLEKELGVKRLEDLNIPTYLCSAD
CCHHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCEEECCC
LYTGKALYFGRGDLIPVLLGSCSIPGIFEPVEYENFLLVDGGIVNNLPVEPLEKFKEPII
CCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCC
GVDVLPITQERKIKNILHILIRSFFLAVRSNSEKRKEFCNVVIEPPLEEFSPLDVNKADE
CCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCHHHCCCCCCCCHHH
IFLRGYESTLRIMRNFVKH
HHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGNLKLKRFEEVNLVLSGGAAKGIAHIGVLKALEELGIKVKRLSGVSAGAIVSVFYASG
CCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCC
YTPDEMLKLLKEVNWLKLFKFKTPKMGLMGWEKAAEFLEKELGVKRLEDLNIPTYLCSAD
CCHHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCEEECCC
LYTGKALYFGRGDLIPVLLGSCSIPGIFEPVEYENFLLVDGGIVNNLPVEPLEKFKEPII
CCCCCEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCC
GVDVLPITQERKIKNILHILIRSFFLAVRSNSEKRKEFCNVVIEPPLEEFSPLDVNKADE
CCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCHHHCCCCCCCCHHH
IFLRGYESTLRIMRNFVKH
HHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]