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The map label for this gene is nodT [H]

Identifier: 15606535

GI number: 15606535

Start: 946057

End: 947304

Strand: Direct

Name: nodT [H]

Synonym: aq_1332

Alternate gene names: 15606535

Gene position: 946057-947304 (Clockwise)

Preceding gene: 15606534

Following gene: 15606538

Centisome position: 60.98

GC content: 42.07

Gene sequence:

>1248_bases
ATGAGTGGTGAGATGAGAGTAATTTGGGTAATCCTTTTCCTTTTTACTTTTTCCTTCCCGCTTACCTTGGAAGAAGCGGT
AAGTATAGCCTTGAAAAACGTAACAGATGTCAAGCTTTCACGTTACGAACTGAAAAAGCTCGACTACGAGATAAAGAAAG
CGCTTTCTGGCATACTGCCGAAGGTGACGGGTTCTTACTCTTACTTAAGGCTGGACGATTCCCTCGTTTACGGATTTGCC
TTGAGGGACAGGCAAAGTTACGACATTACGCTTTCTCAAACTATTTTCAACAAAGCAATTTTTGACAGTATCTCCCTTGC
CAAAAGCCAGAAGGAACTCCAGAACTTAATACTTGAGGATGTAAAAAGGGAAGTTGTCTACAGAGTTAAAGACATGTACT
ACGCAATTCTCTACAAGTGGACGGTTGTTGAGTTAAAAAAGGAAAACCTGAAATACTGGGAGGAGTACTTAAAGACTGTT
GAAGAGAAGTATAAGGCGGGGATACTCCCGAAGGTTGAGTACGTAAGGGCTAAGGCTCAGTTTGAAAACGCAAAGGCGGA
GCTCGCACAGGCAAGAGCGGACTACGAGAAATCAATAGAAAACTTTAAAGCTTTTTTAAAACTTGAAAAAACTCCTGAGT
TCATGGGAAAATTAGAAGTAAACCTGAATGAAGACTTTTCTGAGGAAAAACTTTTAGAGTTCCTTGAGAAAAACAACTCC
ACCTTGAAGGTAGCAAAGGCGAGGATAGAAGTGGCAAAGAAAACCTACAACTTGTCAAAGGCGGATTATTATCCTACCCT
TGACGCTTACCTTACTTACGAGGGTTACACGACGAGAAAGAGCCTCTTCGGAGGAAAGGAATGGGTTAAGGGCTATACTT
TCGGTATCAGTTTGAACTACAAGTTTTTTGACGGGTTTGCGAGAGAGGCGGAAGTTGCCCAGAGGAAGGTAGATATCTTT
CAGGAGAAAGAAAGGTTTAAAGATACGTTTTTTAACGTAAAGAGGGACTTAAAGAACGCCCTCCTCGAAATAAAGTCCCT
GAAGGAACGAATAAAGGCTGTGAAGCTCTCCCTTGAAGCGGCAAAGGAGACTTTAAAGCTCGCCACGGAAAGGCACAAAG
AAGGTATTGGAACGTACCTTGAGGTTTTAGACGCAAGGAGGAATTACAACGACACTTTAGATACTCTACACTTTTTGACT
TACAGGTATATGAGCACGCTCGCCTTAATAGAACGCTTAACCAGATGA

Upstream 100 bases:

>100_bases
ATGGTGGATACGCCTACGTTGAAGGAGACCTGAAAGACGGCGATAAAGTGGTTACGGAAAACACATTTTTATTGAAAGAA
GGAGCTGAGGTAGTGGTGAG

Downstream 100 bases:

>100_bases
GGCTTCCACTTTTTCCCTCAACCTACAGACGGGGCAAATCTCTCCGACAGTGGGCTCTCCGCACACTTTGCAGGGCTGGA
GTTCTTTTTTCTCCTCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSGEMRVIWVILFLFTFSFPLTLEEAVSIALKNVTDVKLSRYELKKLDYEIKKALSGILPKVTGSYSYLRLDDSLVYGFA
LRDRQSYDITLSQTIFNKAIFDSISLAKSQKELQNLILEDVKREVVYRVKDMYYAILYKWTVVELKKENLKYWEEYLKTV
EEKYKAGILPKVEYVRAKAQFENAKAELAQARADYEKSIENFKAFLKLEKTPEFMGKLEVNLNEDFSEEKLLEFLEKNNS
TLKVAKARIEVAKKTYNLSKADYYPTLDAYLTYEGYTTRKSLFGGKEWVKGYTFGISLNYKFFDGFAREAEVAQRKVDIF
QEKERFKDTFFNVKRDLKNALLEIKSLKERIKAVKLSLEAAKETLKLATERHKEGIGTYLEVLDARRNYNDTLDTLHFLT
YRYMSTLALIERLTR

Sequences:

>Translated_415_residues
MSGEMRVIWVILFLFTFSFPLTLEEAVSIALKNVTDVKLSRYELKKLDYEIKKALSGILPKVTGSYSYLRLDDSLVYGFA
LRDRQSYDITLSQTIFNKAIFDSISLAKSQKELQNLILEDVKREVVYRVKDMYYAILYKWTVVELKKENLKYWEEYLKTV
EEKYKAGILPKVEYVRAKAQFENAKAELAQARADYEKSIENFKAFLKLEKTPEFMGKLEVNLNEDFSEEKLLEFLEKNNS
TLKVAKARIEVAKKTYNLSKADYYPTLDAYLTYEGYTTRKSLFGGKEWVKGYTFGISLNYKFFDGFAREAEVAQRKVDIF
QEKERFKDTFFNVKRDLKNALLEIKSLKERIKAVKLSLEAAKETLKLATERHKEGIGTYLEVLDARRNYNDTLDTLHFLT
YRYMSTLALIERLTR
>Mature_414_residues
SGEMRVIWVILFLFTFSFPLTLEEAVSIALKNVTDVKLSRYELKKLDYEIKKALSGILPKVTGSYSYLRLDDSLVYGFAL
RDRQSYDITLSQTIFNKAIFDSISLAKSQKELQNLILEDVKREVVYRVKDMYYAILYKWTVVELKKENLKYWEEYLKTVE
EKYKAGILPKVEYVRAKAQFENAKAELAQARADYEKSIENFKAFLKLEKTPEFMGKLEVNLNEDFSEEKLLEFLEKNNST
LKVAKARIEVAKKTYNLSKADYYPTLDAYLTYEGYTTRKSLFGGKEWVKGYTFGISLNYKFFDGFAREAEVAQRKVDIFQ
EKERFKDTFFNVKRDLKNALLEIKSLKERIKAVKLSLEAAKETLKLATERHKEGIGTYLEVLDARRNYNDTLDTLHFLTY
RYMSTLALIERLTR

Specific function: Required For Proper Expression Of Outer Membrane Protein Genes Such As Ompf, Nmpc, Protein 2, Hemolysin, Colicin V, Or Colicin E1. May Be Specialized For Signal Sequence Independent, Extracellular Secretion In Gram-Negative Bacteria. [C]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 48688; Mature: 48557

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEMRVIWVILFLFTFSFPLTLEEAVSIALKNVTDVKLSRYELKKLDYEIKKALSGILP
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
KVTGSYSYLRLDDSLVYGFALRDRQSYDITLSQTIFNKAIFDSISLAKSQKELQNLILED
HHCCCEEEEEECCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKREVVYRVKDMYYAILYKWTVVELKKENLKYWEEYLKTVEEKYKAGILPKVEYVRAKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FENAKAELAQARADYEKSIENFKAFLKLEKTPEFMGKLEVNLNEDFSEEKLLEFLEKNNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEECCCCCCCHHHHHHHHHCCCC
TLKVAKARIEVAKKTYNLSKADYYPTLDAYLTYEGYTTRKSLFGGKEWVKGYTFGISLNY
EEHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCHHHHHCCCHHHHCEEEEEEEEEE
KFFDGFAREAEVAQRKVDIFQEKERFKDTFFNVKRDLKNALLEIKSLKERIKAVKLSLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKETLKLATERHKEGIGTYLEVLDARRNYNDTLDTLHFLTYRYMSTLALIERLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGEMRVIWVILFLFTFSFPLTLEEAVSIALKNVTDVKLSRYELKKLDYEIKKALSGILP
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
KVTGSYSYLRLDDSLVYGFALRDRQSYDITLSQTIFNKAIFDSISLAKSQKELQNLILED
HHCCCEEEEEECCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKREVVYRVKDMYYAILYKWTVVELKKENLKYWEEYLKTVEEKYKAGILPKVEYVRAKAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FENAKAELAQARADYEKSIENFKAFLKLEKTPEFMGKLEVNLNEDFSEEKLLEFLEKNNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCEEEECCCCCCCHHHHHHHHHCCCC
TLKVAKARIEVAKKTYNLSKADYYPTLDAYLTYEGYTTRKSLFGGKEWVKGYTFGISLNY
EEHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCHHHHHCCCHHHHCEEEEEEEEEE
KFFDGFAREAEVAQRKVDIFQEKERFKDTFFNVKRDLKNALLEIKSLKERIKAVKLSLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKETLKLATERHKEGIGTYLEVLDARRNYNDTLDTLHFLTYRYMSTLALIERLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2338917; 2622339 [H]