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The map label for this gene is ybgF [C]

Identifier: 15606474

GI number: 15606474

Start: 879682

End: 880335

Strand: Direct

Name: ybgF [C]

Synonym: aq_1247

Alternate gene names: 15606474

Gene position: 879682-880335 (Clockwise)

Preceding gene: 15606466

Following gene: 15606475

Centisome position: 56.7

GC content: 40.21

Gene sequence:

>654_bases
ATGAAAAAATACTCAATACTTCTCTTACCCTTCATACTCGCTTCCTGTGCACCTGTATCCGAGAGCCAATTCACGGAACA
AAGACTCAGCGAACTTGAAATCAAAGTGGCAAAACTCGAGGAAAGACAGGAAAAGATAGAGGAACAACTCGAGGAAATAA
ACAAAAGACTCGACTACATAACGAAGAGTATCGCAAAAAGGGAAATAAAGAGTTACAAAGAGCCGGAGGAGGAAAAACCA
CCTTTTGAAGAAGTAAAATCCACCGAGGATGAAAAAGCCGAGTACGAAAATGCTCTAGAACTCTATAAAATGAAGCAACT
GAACGAAGCAAGGGACGCATTTGTGGAGTTCATAAAAAAGTATCCAAATTCAAAGTACACGGATAACGCGTATTTTTGGC
TCGGGAAAACATTCTACGAACTGGGAAATACCGAGAGGGCTAAACAAATCTTTAACGTTTTAATTAAGAAGTGCAAGTCT
GGAGAACTTCCCGACTGTAATAAACTTCCCGACACTTACTTTATGCTCGTAAAAATTTCTCTCGACGAGGGGAACATAGA
AGAGGCAAACAGGTACTTATCCATACTTGAGGAAAAGTTTCCCGATGCAGAGGCAACCCAAAGGGCAAAGGAGTTAATAT
ATAAAACTCCATGA

Upstream 100 bases:

>100_bases
GACTTGCGTCTTCGTCGTAGTATATCTTTGCCATGCGTGACCTCCTGAAGGATTTATTATAAAGAACAAATTGTAAGATA
ATAATGTCGGGAGGTAGGTT

Downstream 100 bases:

>100_bases
GCTTAAAACTTCCAGAGCACGTTGCGATAATAATGGACGGAAACGGGCGGTGGGCAAGACAGAGGGGTCTACCCAGAGTT
GCGGGACATTACAGAGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKYSILLLPFILASCAPVSESQFTEQRLSELEIKVAKLEERQEKIEEQLEEINKRLDYITKSIAKREIKSYKEPEEEKP
PFEEVKSTEDEKAEYENALELYKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKS
GELPDCNKLPDTYFMLVKISLDEGNIEEANRYLSILEEKFPDAEATQRAKELIYKTP

Sequences:

>Translated_217_residues
MKKYSILLLPFILASCAPVSESQFTEQRLSELEIKVAKLEERQEKIEEQLEEINKRLDYITKSIAKREIKSYKEPEEEKP
PFEEVKSTEDEKAEYENALELYKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKS
GELPDCNKLPDTYFMLVKISLDEGNIEEANRYLSILEEKFPDAEATQRAKELIYKTP
>Mature_217_residues
MKKYSILLLPFILASCAPVSESQFTEQRLSELEIKVAKLEERQEKIEEQLEEINKRLDYITKSIAKREIKSYKEPEEEKP
PFEEVKSTEDEKAEYENALELYKMKQLNEARDAFVEFIKKYPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKS
GELPDCNKLPDTYFMLVKISLDEGNIEEANRYLSILEEKFPDAEATQRAKELIYKTP

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25584; Mature: 25584

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYSILLLPFILASCAPVSESQFTEQRLSELEIKVAKLEERQEKIEEQLEEINKRLDYI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSIAKREIKSYKEPEEEKPPFEEVKSTEDEKAEYENALELYKMKQLNEARDAFVEFIKK
HHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKSGELPDCNKLPDTYFMLVKIS
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
LDEGNIEEANRYLSILEEKFPDAEATQRAKELIYKTP
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKYSILLLPFILASCAPVSESQFTEQRLSELEIKVAKLEERQEKIEEQLEEINKRLDYI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSIAKREIKSYKEPEEEKPPFEEVKSTEDEKAEYENALELYKMKQLNEARDAFVEFIKK
HHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPNSKYTDNAYFWLGKTFYELGNTERAKQIFNVLIKKCKSGELPDCNKLPDTYFMLVKIS
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
LDEGNIEEANRYLSILEEKFPDAEATQRAKELIYKTP
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]