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The map label for this gene is ynaI [C]

Identifier: 15606178

GI number: 15606178

Start: 558785

End: 559891

Strand: Direct

Name: ynaI [C]

Synonym: aq_812

Alternate gene names: 15606178

Gene position: 558785-559891 (Clockwise)

Preceding gene: 15606172

Following gene: 15606182

Centisome position: 36.02

GC content: 34.78

Gene sequence:

>1107_bases
ATGGAAGAGATACTTATATGGATAAAGAAATTAGAAAAGTACCTCTATGCGCTTAATGCGAAAGTGGCCGGAATACCTCT
TTACAAAATAATTATTGCATCTGCAATTATGCTTTTTACCCTAATTTTAAGGAGACTTATAGCTTTTTTAATAGTTAAAA
TCTTAACGAAATTAACTATAAGGACAAAAACTGATGTTGACGAATTAATAGTAAAGGCATTCGTAAAGCCTTTTAGCTAC
TTTATCGTTGTTTTTGGTTTTTATTTATCCCTTTTAGTGCTTGAAGTTCCGAAGGTTTACGCAGATAAATTTCTTAAAAC
TTTTTCACTGCTTATACTCGGATGGGCAATTATAAGATTCTTGAATCTATTTCACAATAAAATTGTGGAATTTTTCGTAA
AAGTTGGGGGAAAAGACTTTGCTGAAGAGGTAGGAGATTTTATTTTAAAGATTTTAAAGGCCTTTGTCGTTGTTATCGTA
GGTGCTTCCCTTCTTCAGGAATGGGGAGTAAATATAGGAGCTATCCTCGCTTCCGTAGGACTTTTGGGTCTTGCCGTTTC
ACTAGCGGCTAAAGATACCTTTGAAAATATACTGAGCGGATTAATAATACTCTTAGATAAACCTGTGAAAGTGGGTGAAA
CGGTAAAAGTTAAGGATTTCATGGGAAGTGTTGAGGACATAGGTCTGCGTTCAACGAAGATAAGAACCTTTGACAAGTCT
TTAGTTACTATTCCCAACAGAGATATAGTTAACAACCACGTTGAGAACTTCACGAGGAGAAACAAAAGGAGGGTAAGGTT
TTACATAGGAGTGGTTTATTCTACAAAGAGGGAGCAACTTGAAAACATATTAAAGGAGATAAGGGAACTTTTGAAGGAGC
ACCCCGGAGTAGCGAAGGACGAAAAGTTTTACGTTTACTTTGAAAATTACGGAGATAGTTCCCTAAATATACTAATTCAA
TACTACGCAAATACGAACGATTACGAAGAGTACTTGAAAATAATAGAAGACATAAACCTTAAAATAATGGAAATAGTTGA
GAAAAACGGAAGTTCTTTTGCTTTCCCAAGCAGATCTGTATACATAGAAAAGATGCCGAAATCTTAA

Upstream 100 bases:

>100_bases
TGAAGTGAACTATCGGCGGATGGAGAACCTCCATTTTAGCCCCTCCTGTTTAAAATGTAGTTCTCTATTTAAAATATTCA
CTAACTTATAATTATTACCG

Downstream 100 bases:

>100_bases
CTTTTCTTTTTTATATACGCCACCGCTACAGAATAATCCCTCTCGTGAGACAAGGAAACTATCACTTCGTAATTTTTCAG
GATTTCTTCTACTCCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MEEILIWIKKLEKYLYALNAKVAGIPLYKIIIASAIMLFTLILRRLIAFLIVKILTKLTIRTKTDVDELIVKAFVKPFSY
FIVVFGFYLSLLVLEVPKVYADKFLKTFSLLILGWAIIRFLNLFHNKIVEFFVKVGGKDFAEEVGDFILKILKAFVVVIV
GASLLQEWGVNIGAILASVGLLGLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVKDFMGSVEDIGLRSTKIRTFDKS
LVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGVAKDEKFYVYFENYGDSSLNILIQ
YYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFAFPSRSVYIEKMPKS

Sequences:

>Translated_368_residues
MEEILIWIKKLEKYLYALNAKVAGIPLYKIIIASAIMLFTLILRRLIAFLIVKILTKLTIRTKTDVDELIVKAFVKPFSY
FIVVFGFYLSLLVLEVPKVYADKFLKTFSLLILGWAIIRFLNLFHNKIVEFFVKVGGKDFAEEVGDFILKILKAFVVVIV
GASLLQEWGVNIGAILASVGLLGLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVKDFMGSVEDIGLRSTKIRTFDKS
LVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGVAKDEKFYVYFENYGDSSLNILIQ
YYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFAFPSRSVYIEKMPKS
>Mature_368_residues
MEEILIWIKKLEKYLYALNAKVAGIPLYKIIIASAIMLFTLILRRLIAFLIVKILTKLTIRTKTDVDELIVKAFVKPFSY
FIVVFGFYLSLLVLEVPKVYADKFLKTFSLLILGWAIIRFLNLFHNKIVEFFVKVGGKDFAEEVGDFILKILKAFVVVIV
GASLLQEWGVNIGAILASVGLLGLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVKDFMGSVEDIGLRSTKIRTFDKS
LVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGVAKDEKFYVYFENYGDSSLNILIQ
YYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFAFPSRSVYIEKMPKS

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family

Homologues:

Organism=Escherichia coli, GI1787591, Length=218, Percent_Identity=33.9449541284404, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1789291, Length=267, Percent_Identity=25.8426966292135, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786670, Length=253, Percent_Identity=25.6916996047431, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI2367355, Length=147, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y812_AQUAE (O66994)

Other databases:

- EMBL:   AE000657
- PIR:   G70370
- RefSeq:   NP_213555.1
- ProteinModelPortal:   O66994
- SMR:   O66994
- GeneID:   1193444
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_812
- NMPDR:   fig|224324.1.peg.570
- HOGENOM:   HBG710405
- OMA:   KRRLVHK
- PhylomeDB:   O66994
- BioCyc:   AAEO224324:AQ_812-MONOMER
- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014

Pfam domain/function: PF00924 MS_channel; SSF82689 MscC_channel_C; SSF82861 MscS_transmembr; SSF50182 Sm_like_riboprot

EC number: NA

Molecular weight: Translated: 42179; Mature: 42179

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc567fe0)-; HASH(0xca82d58)-; HASH(0xcb8a9dc)-; HASH(0xd206a94)-; HASH(0xca5d150)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEILIWIKKLEKYLYALNAKVAGIPLYKIIIASAIMLFTLILRRLIAFLIVKILTKLTI
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTKTDVDELIVKAFVKPFSYFIVVFGFYLSLLVLEVPKVYADKFLKTFSLLILGWAIIRF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNLFHNKIVEFFVKVGGKDFAEEVGDFILKILKAFVVVIVGASLLQEWGVNIGAILASVG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLGLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVKDFMGSVEDIGLRSTKIRTFDKS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHCCCCHHHHHHHCCC
LVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGVAKD
CEECCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EKFYVYFENYGDSSLNILIQYYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFAFPSRSV
CEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCE
YIEKMPKS
EEECCCCH
>Mature Secondary Structure
MEEILIWIKKLEKYLYALNAKVAGIPLYKIIIASAIMLFTLILRRLIAFLIVKILTKLTI
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTKTDVDELIVKAFVKPFSYFIVVFGFYLSLLVLEVPKVYADKFLKTFSLLILGWAIIRF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNLFHNKIVEFFVKVGGKDFAEEVGDFILKILKAFVVVIVGASLLQEWGVNIGAILASVG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLGLAVSLAAKDTFENILSGLIILLDKPVKVGETVKVKDFMGSVEDIGLRSTKIRTFDKS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCCHHHCCCCHHHHHHHCCC
LVTIPNRDIVNNHVENFTRRNKRRVRFYIGVVYSTKREQLENILKEIRELLKEHPGVAKD
CEECCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EKFYVYFENYGDSSLNILIQYYANTNDYEEYLKIIEDINLKIMEIVEKNGSSFAFPSRSV
CEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCE
YIEKMPKS
EEECCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320