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The map label for this gene is 15606151

Identifier: 15606151

GI number: 15606151

Start: 532257

End: 532823

Strand: Direct

Name: 15606151

Synonym: aq_768

Alternate gene names: NA

Gene position: 532257-532823 (Clockwise)

Preceding gene: 15606150

Following gene: 15606152

Centisome position: 34.31

GC content: 44.62

Gene sequence:

>567_bases
ATGAAAGTTGTGAGGGCTTTTGTTGGTTTTTTCACGAGCAAATCCATAAACGAGGTAGCGGAAAGGATAAAAAAGGAAGT
GGATTTAAAAATTATGGGAAAGTGGGTGGAACCCCAAAACGTCCACATGACGCTCCAGTTCCTCGGGGACATCACAGAAG
CCCAAGCTATAGAGGTGATTAAAAATTTACAGGAAATCTCAAAGAAGAACATACCCTTCAGGATTAAGTACAAAGGTCTC
GGCGTATTTCCCGACGTCAAAAGACCGAGGGTCCTCTGGATTGGTGTATCGGAAGGGGCAAACAAGTTGACAAATCTCGC
AAAGGAAGTGGCAAGACTAAACGCAAAGAAGGGTATTATCCCGAAAAATTCTAAGAACTTCGTTCCCCACGTTACGATAT
GCAGGATAAAGTCCTACGACAGGAAAACCTTAAACGAACTCCTCAGGAAGTACAGAACAGTTGAGTTTGGTGAAGACGAG
GTAAACAAGATAGCCCTCATTTCCAGTACACTCACGTCCGTGGGACCCATATACACGGTGGTTGAGGAGTTTTACCTCGG
AGGGTGA

Upstream 100 bases:

>100_bases
CGTAAAGATACTCACTTACGCCTTTTCGTGGGAGGGGTATTACTTCGGCCTCAGGACGATTGCTTACTCCGCACCGATAA
CCCTTTTATATTAAGTTAGA

Downstream 100 bases:

>100_bases
ATATGGTCACCTACAGGTCTGCGGGAGTTGACATAGACAAGGCGAACGAGTTCGTGAAGTTCATAAAAGAAAAGGTAAAA
AAAGAGTTTAATCTGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKVVRAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVIKNLQEISKKNIPFRIKYKGL
GVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGIIPKNSKNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDE
VNKIALISSTLTSVGPIYTVVEEFYLGG

Sequences:

>Translated_188_residues
MKVVRAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVIKNLQEISKKNIPFRIKYKGL
GVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGIIPKNSKNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDE
VNKIALISSTLTSVGPIYTVVEEFYLGG
>Mature_188_residues
MKVVRAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVIKNLQEISKKNIPFRIKYKGL
GVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGIIPKNSKNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDE
VNKIALISSTLTSVGPIYTVVEEFYLGG

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0097 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y768_AQUAE (O66967)

Other databases:

- EMBL:   AE000657
- PIR:   D70367
- RefSeq:   NP_213528.1
- ProteinModelPortal:   O66967
- SMR:   O66967
- GeneID:   1193417
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_768
- NMPDR:   fig|224324.1.peg.543
- HOGENOM:   HBG699408
- OMA:   RCFLAIE
- ProtClustDB:   CLSK2299493
- BioCyc:   AAEO224324:AQ_768-MONOMER
- GO:   GO:0005622
- InterPro:   IPR004175
- InterPro:   IPR014051
- InterPro:   IPR009097
- TIGRFAMs:   TIGR02258

Pfam domain/function: PF02834 2_5_RNA_ligase; SSF55144 Cyc_nuc_Pdiester

EC number: NA

Molecular weight: Translated: 21366; Mature: 21366

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVRAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVI
CHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEECCCCCCCCEEHHHHHHCHHHHHHHHHH
KNLQEISKKNIPFRIKYKGLGVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGII
HHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PKNSKNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDEVNKIALISSTLTSVGPIYTV
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VEEFYLGG
HHHHHCCC
>Mature Secondary Structure
MKVVRAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVI
CHHHHHHHHHHCCCCHHHHHHHHHHHCCHHEEECCCCCCCCEEHHHHHHCHHHHHHHHHH
KNLQEISKKNIPFRIKYKGLGVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGII
HHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
PKNSKNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDEVNKIALISSTLTSVGPIYTV
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VEEFYLGG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320