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The map label for this gene is pilC1 [H]

Identifier: 15606135

GI number: 15606135

Start: 517421

End: 518647

Strand: Direct

Name: pilC1 [H]

Synonym: aq_747

Alternate gene names: 15606135

Gene position: 517421-518647 (Clockwise)

Preceding gene: 15606134

Following gene: 15606146

Centisome position: 33.35

GC content: 42.14

Gene sequence:

>1227_bases
GTGCCTCTTTTCAAGTACAAGGCCGTAACTCCTGAAGGAAGAGTAGTTGAGGGGCAGGGGGAGTTCCCTTCAGTTTTAGA
ACTTTACGAAAGGCTCAGTGCCCAAGGATTGACACTTATTTCTTACAAAACGATAAAGGAAGAAGTCAAGAAAGGGTTTG
AGATAAACATTCCTTTACCCTTTGGTAGTGTATCGGAAAGGGATTGGTCCCTTTTGTGCAGACAGCTTTCCGTTCTCGTG
GGAGCCGGCGTAAGCATAGTAGAGGCTATAGAACTCGTCGCCGAGCAAATGCAAAACAAGAAGTTAAGAAAAGCACTTAT
GGAAACGGCAAAGGATATAGAGGAAGGAAGTTCCATACACGATGCCCTTGCAAAGAGAAAGAACATATTCCCCGAATTTC
TTATAAACCTTGTGGAAGTAGGGGAAGAGACGGGTGAACTTGATCTCGTTTTAAGAAGGGCAGCGGAGTATTACGAAAAG
ATAGCGTTTATAAAAGGGAAGATAAAGAGTGCGTCCTTTTATCCGACTTTTGTTATGATCTTTGCAACGGCTATAGTGTG
GTTCATTCTGACCTTCGTAGTACCCAAATTTGCCGAAATTTATAAGTCTTTAGGTGGAACACTTCCCGCTCCTACACAGC
TCTTAATAGATATCTCATTAACGCTCCAGAGGAATATTCCCTACATCTTAGGTACTCTACTGATTTCGGTAGCGGTATTC
CTTTACTTTTACAGGACAAACCTGAAGTTCAGGGCTTTAATTCACAGAATTTTACTTAGATTGCCTGTTTTTGGAGGGAT
ATTTAAAAAGGGTGCCTTTGCAAGGTTTGCAAGAACTATGGCAACGCTTTTTGCTTCAGGTGTTCCCCTTGAAAGAGTTC
TGGAAATCTCCGGAAGGGTTGTAGGTTTTATTCCTATAGAAAAGGCCCTTAACGAAGCAAGAAAAGAAGTTTTAGAGGGT
AAAAACCTGTGGATGGCACTCCAGAATACTGAAATGTTTCCCAAAATGATAATAGCTATGGTAAGGGTAGGTGAGGAAAC
AGGACAGATGGATCAGATGCTGAACTCCATAGCGAACTTTTACGAAGAAGAGGTGGACAGGAGCATAGAGGGACTTGTTG
CTCTCATAGAACCGGCGTTGATAGTAATTCTCGGAGTGATTATAGGTGCTATACTCATAGCCCTATACCTGCCTATATTC
AACATCGGAAGTTTCATAATCAGGTAA

Upstream 100 bases:

>100_bases
TTTACAAGCTTTATAAACAAGGTTTAATAACCTTGGAAGATGCTATGGAAGCCTCTCCCGATCCAAAAGAGCTTGAAAGA
ATGATTAGGGGAGGCAGGTA

Downstream 100 bases:

>100_bases
TCCTCTTGTATATAAGGTCTAGAAGGTATCTGAGTTCTTGGCTTTCCTTGAAAATTTCTTTTTCTTTTAGTTCTTCGTAT
AGTTTTTTTATTTCTTCTTT

Product: fimbrial assembly protein PilC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPLFKYKAVTPEGRVVEGQGEFPSVLELYERLSAQGLTLISYKTIKEEVKKGFEINIPLPFGSVSERDWSLLCRQLSVLV
GAGVSIVEAIELVAEQMQNKKLRKALMETAKDIEEGSSIHDALAKRKNIFPEFLINLVEVGEETGELDLVLRRAAEYYEK
IAFIKGKIKSASFYPTFVMIFATAIVWFILTFVVPKFAEIYKSLGGTLPAPTQLLIDISLTLQRNIPYILGTLLISVAVF
LYFYRTNLKFRALIHRILLRLPVFGGIFKKGAFARFARTMATLFASGVPLERVLEISGRVVGFIPIEKALNEARKEVLEG
KNLWMALQNTEMFPKMIIAMVRVGEETGQMDQMLNSIANFYEEEVDRSIEGLVALIEPALIVILGVIIGAILIALYLPIF
NIGSFIIR

Sequences:

>Translated_408_residues
MPLFKYKAVTPEGRVVEGQGEFPSVLELYERLSAQGLTLISYKTIKEEVKKGFEINIPLPFGSVSERDWSLLCRQLSVLV
GAGVSIVEAIELVAEQMQNKKLRKALMETAKDIEEGSSIHDALAKRKNIFPEFLINLVEVGEETGELDLVLRRAAEYYEK
IAFIKGKIKSASFYPTFVMIFATAIVWFILTFVVPKFAEIYKSLGGTLPAPTQLLIDISLTLQRNIPYILGTLLISVAVF
LYFYRTNLKFRALIHRILLRLPVFGGIFKKGAFARFARTMATLFASGVPLERVLEISGRVVGFIPIEKALNEARKEVLEG
KNLWMALQNTEMFPKMIIAMVRVGEETGQMDQMLNSIANFYEEEVDRSIEGLVALIEPALIVILGVIIGAILIALYLPIF
NIGSFIIR
>Mature_407_residues
PLFKYKAVTPEGRVVEGQGEFPSVLELYERLSAQGLTLISYKTIKEEVKKGFEINIPLPFGSVSERDWSLLCRQLSVLVG
AGVSIVEAIELVAEQMQNKKLRKALMETAKDIEEGSSIHDALAKRKNIFPEFLINLVEVGEETGELDLVLRRAAEYYEKI
AFIKGKIKSASFYPTFVMIFATAIVWFILTFVVPKFAEIYKSLGGTLPAPTQLLIDISLTLQRNIPYILGTLLISVAVFL
YFYRTNLKFRALIHRILLRLPVFGGIFKKGAFARFARTMATLFASGVPLERVLEISGRVVGFIPIEKALNEARKEVLEGK
NLWMALQNTEMFPKMIIAMVRVGEETGQMDQMLNSIANFYEEEVDRSIEGLVALIEPALIVILGVIIGAILIALYLPIFN
IGSFIIR

Specific function: Involved in the translocation of the type IV pilin (pilA) [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=404, Percent_Identity=29.4554455445545, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786295, Length=405, Percent_Identity=29.8765432098765, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 45764; Mature: 45633

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFKYKAVTPEGRVVEGQGEFPSVLELYERLSAQGLTLISYKTIKEEVKKGFEINIPLP
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCC
FGSVSERDWSLLCRQLSVLVGAGVSIVEAIELVAEQMQNKKLRKALMETAKDIEEGSSIH
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DALAKRKNIFPEFLINLVEVGEETGELDLVLRRAAEYYEKIAFIKGKIKSASFYPTFVMI
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FATAIVWFILTFVVPKFAEIYKSLGGTLPAPTQLLIDISLTLQRNIPYILGTLLISVAVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHH
LYFYRTNLKFRALIHRILLRLPVFGGIFKKGAFARFARTMATLFASGVPLERVLEISGRV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCE
VGFIPIEKALNEARKEVLEGKNLWMALQNTEMFPKMIIAMVRVGEETGQMDQMLNSIANF
EEEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YEEEVDRSIEGLVALIEPALIVILGVIIGAILIALYLPIFNIGSFIIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLFKYKAVTPEGRVVEGQGEFPSVLELYERLSAQGLTLISYKTIKEEVKKGFEINIPLP
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCC
FGSVSERDWSLLCRQLSVLVGAGVSIVEAIELVAEQMQNKKLRKALMETAKDIEEGSSIH
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
DALAKRKNIFPEFLINLVEVGEETGELDLVLRRAAEYYEKIAFIKGKIKSASFYPTFVMI
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FATAIVWFILTFVVPKFAEIYKSLGGTLPAPTQLLIDISLTLQRNIPYILGTLLISVAVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHH
LYFYRTNLKFRALIHRILLRLPVFGGIFKKGAFARFARTMATLFASGVPLERVLEISGRV
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCE
VGFIPIEKALNEARKEVLEGKNLWMALQNTEMFPKMIIAMVRVGEETGQMDQMLNSIANF
EEEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YEEEVDRSIEGLVALIEPALIVILGVIIGAILIALYLPIFNIGSFIIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1971619; 10984043 [H]