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The map label for this gene is atpC

Identifier: 15606086

GI number: 15606086

Start: 459334

End: 459732

Strand: Direct

Name: atpC

Synonym: aq_673

Alternate gene names: 15606086

Gene position: 459334-459732 (Clockwise)

Preceding gene: 15606085

Following gene: 15606087

Centisome position: 29.61

GC content: 45.61

Gene sequence:

>399_bases
ATGATACAGGTTGAAATAGTTTCTCCGCAGGGAATGGTTTACTCGGGAGAAGTAGAGAGCGTAAACGTCCCCACGGTTGA
AGGAGAGGTGGGAATCCTTGAAAACCACATGTACCTGATGACCCTCTTGAAACCTGGACTTGTTTACTTCAACGGTGACG
ACAAAAACGGAATAGCTGTAACCTACGGCGTTCTGGACGTCACCCCCCAAAAGGTTCTCATTCTTGCGGAAGAAGCTTAC
GAAGTCGGAAAACTTCCTCCAGCAAGCAAGCTAAAAGAAGAGTTTGAAGAAGCCGTGAAGAAAATGGCAACCGCCCAAAC
TATGGAAGAGTTAAAAGAGTGGGAGAAGGAAGCAGAAAAGGCAAGAACTCTCTTAGAACTCGTTGAAAAGTACAGATAA

Upstream 100 bases:

>100_bases
AAATTTAAGGTTTACACGCACCAAAAGGTTCCTCCGAACGACGGAGGTATAGCTCTGGGACAGGCTGTTTTTGGACTTTC
TCTGGTATAATTTAGGGATT

Downstream 100 bases:

>100_bases
CTCAAAACCCGTCCCCTTCTTTCGGGGAAAATTAAAATTTTTTCAACCGAAAGAGCACAAAATCTCCGTTGACCTCGTAC
TTTTCCTCTCAAAAATCAAA

Product: ATP synthase F1 epsilon subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIQVEIVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDKNGIAVTYGVLDVTPQKVLILAEEAY
EVGKLPPASKLKEEFEEAVKKMATAQTMEELKEWEKEAEKARTLLELVEKYR

Sequences:

>Translated_132_residues
MIQVEIVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDKNGIAVTYGVLDVTPQKVLILAEEAY
EVGKLPPASKLKEEFEEAVKKMATAQTMEELKEWEKEAEKARTLLELVEKYR
>Mature_132_residues
MIQVEIVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDKNGIAVTYGVLDVTPQKVLILAEEAY
EVGKLPPASKLKEEFEEAVKKMATAQTMEELKEWEKEAEKARTLLELVEKYR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_AQUAE (O66903)

Other databases:

- EMBL:   AE000657
- PIR:   C70359
- RefSeq:   NP_213463.1
- ProteinModelPortal:   O66903
- SMR:   O66903
- GeneID:   1193965
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_673
- NMPDR:   fig|224324.1.peg.478
- HOGENOM:   HBG663981
- ProtClustDB:   CLSK2299466
- BioCyc:   AAEO224324:AQ_673-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14806; Mature: 14806

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVEIVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDKNGIAV
CEEEEEECCCCEEEECCCCCCCCCCCCCCCEEHHCHHHHEEHHCCCEEEECCCCCCCEEE
TYGVLDVTPQKVLILAEEAYEVGKLPPASKLKEEFEEAVKKMATAQTMEELKEWEKEAEK
EEEEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTLLELVEKYR
HHHHHHHHHHCC
>Mature Secondary Structure
MIQVEIVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDKNGIAV
CEEEEEECCCCEEEECCCCCCCCCCCCCCCEEHHCHHHHEEHHCCCEEEECCCCCCCEEE
TYGVLDVTPQKVLILAEEAYEVGKLPPASKLKEEFEEAVKKMATAQTMEELKEWEKEAEK
EEEEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTLLELVEKYR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320