| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
Click here to switch to the map view.
The map label for this gene is 15606051
Identifier: 15606051
GI number: 15606051
Start: 419071
End: 419574
Strand: Direct
Name: 15606051
Synonym: aq_616
Alternate gene names: NA
Gene position: 419071-419574 (Clockwise)
Preceding gene: 15606050
Following gene: 15606052
Centisome position: 27.01
GC content: 43.25
Gene sequence:
>504_bases ATGAGACTGAAGAAATTACCGATAAGAAGAAAAATGCCCATGGAACTCGCTTACATTGAGAAGCTCTTCCGTGAAGAGGT GGGGCTAGACATTAAAGAACACAAAGACAAAGCTGAACAAATATCCGAAACTGTGGTTGAAATATACGAAGAACTTCTCA GGAAAGGCATAGAAAACGCAAACTACAACGGAAGGGATTACGTCTCTTACTACGACCTTCCCATAACCGAAGATCTCGAA CGCTACATGAACAGATTTATACAGGACAGGGGAGAGGAAGTATTAAAGGCTTTCGTTGATTATCTGGCAAAGCTTGAAGA GGAACTCTTAAAAGCGGAAGAAGCTCTCCCGCCACTTGACGAAGAACTCCACCAAAAGAAGGCGGATATCCTCGGCGGTA TCATGCTTATGTTTGCAAGTGTGGCTAAACAAATAAACGGAGACAGAAAACTCTACGCGGAAAGCATACCCGTAACGAGA GAAGTCCTGAGGACGATGATTTAA
Upstream 100 bases:
>100_bases CGTAAAAACTAAGTACTACCAAAATGGAAAACTCGTAAAGGTTGAAGAGAAGGAAGTTTGTGAGTAATTTCTCTTCTCTT TCCTTTATAATTCTGTAAGT
Downstream 100 bases:
>100_bases AATTAAGTTTATGAGAAAAGTACTCATCTTCTTAGAAGAACTCGTTGAAGACGTTGAGTTTATATACCCGTACCTCAGGT TTAAGGAGGAGGGGTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENANYNGRDYVSYYDLPITEDLE RYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLDEELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTR EVLRTMI
Sequences:
>Translated_167_residues MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENANYNGRDYVSYYDLPITEDLE RYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLDEELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTR EVLRTMI >Mature_167_residues MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENANYNGRDYVSYYDLPITEDLE RYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLDEELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTR EVLRTMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.aeolicus aq_328
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y616_AQUAE (O66868)
Other databases:
- EMBL: AE000657 - PIR: H70354 - RefSeq: NP_213428.1 - ProteinModelPortal: O66868 - SMR: O66868 - GeneID: 1193930 - GenomeReviews: AE000657_GR - KEGG: aae:aq_616 - NMPDR: fig|224324.1.peg.443 - BioCyc: AAEO224324:AQ_616-MONOMER - InterPro: IPR015207 - InterPro: IPR009072
Pfam domain/function: PF09123 DUF1931; SSF47113 Histone-fold
EC number: NA
Molecular weight: Translated: 19654; Mature: 19654
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NYNGRDYVSYYDLPITEDLERYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLD CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTREVLRTMI HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHC >Mature Secondary Structure MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENA CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NYNGRDYVSYYDLPITEDLERYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLD CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH EELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTREVLRTMI HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320