Definition Aquifex aeolicus VF5, complete genome.
Accession NC_000918
Length 1,551,335

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The map label for this gene is 15606051

Identifier: 15606051

GI number: 15606051

Start: 419071

End: 419574

Strand: Direct

Name: 15606051

Synonym: aq_616

Alternate gene names: NA

Gene position: 419071-419574 (Clockwise)

Preceding gene: 15606050

Following gene: 15606052

Centisome position: 27.01

GC content: 43.25

Gene sequence:

>504_bases
ATGAGACTGAAGAAATTACCGATAAGAAGAAAAATGCCCATGGAACTCGCTTACATTGAGAAGCTCTTCCGTGAAGAGGT
GGGGCTAGACATTAAAGAACACAAAGACAAAGCTGAACAAATATCCGAAACTGTGGTTGAAATATACGAAGAACTTCTCA
GGAAAGGCATAGAAAACGCAAACTACAACGGAAGGGATTACGTCTCTTACTACGACCTTCCCATAACCGAAGATCTCGAA
CGCTACATGAACAGATTTATACAGGACAGGGGAGAGGAAGTATTAAAGGCTTTCGTTGATTATCTGGCAAAGCTTGAAGA
GGAACTCTTAAAAGCGGAAGAAGCTCTCCCGCCACTTGACGAAGAACTCCACCAAAAGAAGGCGGATATCCTCGGCGGTA
TCATGCTTATGTTTGCAAGTGTGGCTAAACAAATAAACGGAGACAGAAAACTCTACGCGGAAAGCATACCCGTAACGAGA
GAAGTCCTGAGGACGATGATTTAA

Upstream 100 bases:

>100_bases
CGTAAAAACTAAGTACTACCAAAATGGAAAACTCGTAAAGGTTGAAGAGAAGGAAGTTTGTGAGTAATTTCTCTTCTCTT
TCCTTTATAATTCTGTAAGT

Downstream 100 bases:

>100_bases
AATTAAGTTTATGAGAAAAGTACTCATCTTCTTAGAAGAACTCGTTGAAGACGTTGAGTTTATATACCCGTACCTCAGGT
TTAAGGAGGAGGGGTTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENANYNGRDYVSYYDLPITEDLE
RYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLDEELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTR
EVLRTMI

Sequences:

>Translated_167_residues
MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENANYNGRDYVSYYDLPITEDLE
RYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLDEELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTR
EVLRTMI
>Mature_167_residues
MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENANYNGRDYVSYYDLPITEDLE
RYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLDEELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTR
EVLRTMI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.aeolicus aq_328

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y616_AQUAE (O66868)

Other databases:

- EMBL:   AE000657
- PIR:   H70354
- RefSeq:   NP_213428.1
- ProteinModelPortal:   O66868
- SMR:   O66868
- GeneID:   1193930
- GenomeReviews:   AE000657_GR
- KEGG:   aae:aq_616
- NMPDR:   fig|224324.1.peg.443
- BioCyc:   AAEO224324:AQ_616-MONOMER
- InterPro:   IPR015207
- InterPro:   IPR009072

Pfam domain/function: PF09123 DUF1931; SSF47113 Histone-fold

EC number: NA

Molecular weight: Translated: 19654; Mature: 19654

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYNGRDYVSYYDLPITEDLERYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLD
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTREVLRTMI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHC
>Mature Secondary Structure
MRLKKLPIRRKMPMELAYIEKLFREEVGLDIKEHKDKAEQISETVVEIYEELLRKGIENA
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYNGRDYVSYYDLPITEDLERYMNRFIQDRGEEVLKAFVDYLAKLEEELLKAEEALPPLD
CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EELHQKKADILGGIMLMFASVAKQINGDRKLYAESIPVTREVLRTMI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320