| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is murB1
Identifier: 15605988
GI number: 15605988
Start: 353194
End: 354087
Strand: Direct
Name: murB1
Synonym: aq_520
Alternate gene names: 15605988
Gene position: 353194-354087 (Clockwise)
Preceding gene: 15605987
Following gene: 15605989
Centisome position: 22.77
GC content: 37.7
Gene sequence:
>894_bases ATGCTCTTCCTAAAGAACGTTCCCCTTCAGAACCTTACGACTATAAAAATAGGGGGAAGGGTATCCTTTTACGCAGAGCC TTCCGATCTAAAGGAAATTTCCCTATGTATTGATTTTTCAAAATCCCGAGACATTCCTCTTTTTGTTTTGGGTAACGGTT CTAATACTATTTTCGGTGACGTAAGAGGGCTCGTTGTAAATTTAAAAAACTTAAAAGGTTTTAAAGTAAAAGAAATTAAA GGGAAATTTTTTGTAGAAGCTTTTTCCGGAACGCCTTTAAAGGATTTAATAAGGTTTAGTGTAAAGGAAAATGTAAAGAG TTTTTACAAACTTCTCGGTTTTCCGGCAAGTGTCGGGGGAGCGGTTAGTATGAACGCCGGGGCTTTTGGGGTTGAGATAT CGGATTTTTTAAAGGAAGTTTACTTCGTAGATTGGGAGGGGAAACTCCAAAAAGCAAAAAGGGATGAACTGAATTTTTCT TACAGAAAATCGCCTTTTCCAAAACTTGGAATAGTTTTCAAAGTAGTTTTTGAGTTTGAAAGAAGTAAAGAAAATATACT TCCCAAGTACGAAAAAATAAGAAGAATAAGGAAAGAAAAGCAACCTATAAACCTTCCAACCAGCGGTTCTACCTTCAAAA ATCCGGAGGGTAATTTCGCGGGAAAGCTTCTGGAAAAAGCAGGTTTAAAAGGTTTTAGACTTAAAAACGTAGGATTTTCC GAAAAACACGCTAACTTCCTTGTAAACTACGGAGGTGGAACTTTTTCGGAAGTGGTAGATTTAATAAATATTGCAAAGGA AAGGGTTTACGAAAACTTCGGTATAGTATTGGAGGAGGAGGTAAAGCTGATTGAGAGTAGTGGTTCTGATGGGTGGAAGG TCCTCGGAGCGTGA
Upstream 100 bases:
>100_bases TATCTTGATGCTTTTCACATTTGCTTTCATAGTTTTTTATACATGGCTTTACTTCAGAATAGTCAAGTTTAAAACTCCGA AAATCTTTAGAATTAAATAA
Downstream 100 bases:
>100_bases AATATCCTTGAAAACGGGAAAGGCCGTTGCAAAGGCATTAAGAGAACTGGGGCACGAAGTTTACGAGCTTGACCTTGATA AGGAACTTCCCTGTAAACTC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLFLKNVPLQNLTTIKIGGRVSFYAEPSDLKEISLCIDFSKSRDIPLFVLGNGSNTIFGDVRGLVVNLKNLKGFKVKEIK GKFFVEAFSGTPLKDLIRFSVKENVKSFYKLLGFPASVGGAVSMNAGAFGVEISDFLKEVYFVDWEGKLQKAKRDELNFS YRKSPFPKLGIVFKVVFEFERSKENILPKYEKIRRIRKEKQPINLPTSGSTFKNPEGNFAGKLLEKAGLKGFRLKNVGFS EKHANFLVNYGGGTFSEVVDLINIAKERVYENFGIVLEEEVKLIESSGSDGWKVLGA
Sequences:
>Translated_297_residues MLFLKNVPLQNLTTIKIGGRVSFYAEPSDLKEISLCIDFSKSRDIPLFVLGNGSNTIFGDVRGLVVNLKNLKGFKVKEIK GKFFVEAFSGTPLKDLIRFSVKENVKSFYKLLGFPASVGGAVSMNAGAFGVEISDFLKEVYFVDWEGKLQKAKRDELNFS YRKSPFPKLGIVFKVVFEFERSKENILPKYEKIRRIRKEKQPINLPTSGSTFKNPEGNFAGKLLEKAGLKGFRLKNVGFS EKHANFLVNYGGGTFSEVVDLINIAKERVYENFGIVLEEEVKLIESSGSDGWKVLGA >Mature_297_residues MLFLKNVPLQNLTTIKIGGRVSFYAEPSDLKEISLCIDFSKSRDIPLFVLGNGSNTIFGDVRGLVVNLKNLKGFKVKEIK GKFFVEAFSGTPLKDLIRFSVKENVKSFYKLLGFPASVGGAVSMNAGAFGVEISDFLKEVYFVDWEGKLQKAKRDELNFS YRKSPFPKLGIVFKVVFEFERSKENILPKYEKIRRIRKEKQPINLPTSGSTFKNPEGNFAGKLLEKAGLKGFRLKNVGFS EKHANFLVNYGGGTFSEVVDLINIAKERVYENFGIVLEEEVKLIESSGSDGWKVLGA
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_AQUAE (O66805)
Other databases:
- EMBL: AE000657 - PIR: A70347 - RefSeq: NP_213365.1 - ProteinModelPortal: O66805 - SMR: O66805 - GeneID: 1193223 - GenomeReviews: AE000657_GR - KEGG: aae:aq_520 - NMPDR: fig|224324.1.peg.380 - HOGENOM: HBG686573 - OMA: KITFIND - PhylomeDB: O66805 - ProtClustDB: CLSK233254 - BioCyc: AAEO224324:AQ_520-MONOMER - BRENDA: 1.1.1.158 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 33266; Mature: 33266
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 162-162 ACT_SITE 210-210 ACT_SITE 280-280
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLKNVPLQNLTTIKIGGRVSFYAEPSDLKEISLCIDFSKSRDIPLFVLGNGSNTIFGD CEEECCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEC VRGLVVNLKNLKGFKVKEIKGKFFVEAFSGTPLKDLIRFSVKENVKSFYKLLGFPASVGG CCEEEEEECCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC AVSMNAGAFGVEISDFLKEVYFVDWEGKLQKAKRDELNFSYRKSPFPKLGIVFKVVFEFE EEEECCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RSKENILPKYEKIRRIRKEKQPINLPTSGSTFKNPEGNFAGKLLEKAGLKGFRLKNVGFS HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCC EKHANFLVNYGGGTFSEVVDLINIAKERVYENFGIVLEEEVKLIESSGSDGWKVLGA CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure MLFLKNVPLQNLTTIKIGGRVSFYAEPSDLKEISLCIDFSKSRDIPLFVLGNGSNTIFGD CEEECCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEC VRGLVVNLKNLKGFKVKEIKGKFFVEAFSGTPLKDLIRFSVKENVKSFYKLLGFPASVGG CCEEEEEECCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC AVSMNAGAFGVEISDFLKEVYFVDWEGKLQKAKRDELNFSYRKSPFPKLGIVFKVVFEFE EEEECCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH RSKENILPKYEKIRRIRKEKQPINLPTSGSTFKNPEGNFAGKLLEKAGLKGFRLKNVGFS HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCC EKHANFLVNYGGGTFSEVVDLINIAKERVYENFGIVLEEEVKLIESSGSDGWKVLGA CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320