| Definition | Aquifex aeolicus VF5, complete genome. |
|---|---|
| Accession | NC_000918 |
| Length | 1,551,335 |
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The map label for this gene is 15605648
Identifier: 15605648
GI number: 15605648
Start: 30475
End: 33036
Strand: Direct
Name: 15605648
Synonym: aq_050
Alternate gene names: NA
Gene position: 30475-33036 (Clockwise)
Preceding gene: 15605647
Following gene: 15605652
Centisome position: 1.96
GC content: 35.6
Gene sequence:
>2562_bases TTGATATTTTTCCTTTTTCTCATATTTTCTCTATCCTTTGGCTTTGAAGTTTATATAAAGTCTAACTATCCATTAAAAAA GGACAATCTGCGTCATGTAATAAACGAGAAGAATTACGCGAAAATCCTGGAAATGCTTAAGCAAATTCCCGAAATAAGGG AAGTAAGGTATGAAAAACGAAAGGACAAGCTCTTAATTTACGTGGAAAGGTATCCCATAATCAAAGAGATAAAAATAAAG GGGAACGTTTTTCTGAGAGATGAAGATGTGAAAAACGTTCTTGGAATAGAAGAGGGCATTCCGTTAATAGAGGATAATCC AAAAACTTACGAGGAAATTCTTGAAAAGTATTATAAAGAAATCGGTTTTTTAAATGCAGATACCAAAGTGAACATAAGTT TAGACGATAAAGGAAACGCTATTTTCTACATAAATATTCGCGAGGGGAACCTTTATTTTCTCGAAGATATCCAGTTTGAA GGTGTTAAAAAGCTACAAAAAAAAGAACTGATAAAAGCCTCTGGACTTGTAATAGGGAGTATTTTTGATATAGATAAAGT AGAAGACGCAGAGGAGAATTTAGAAAACTTCTACAGAAAAAAAGGTTTTTTTGAGAGTTTCGTTTATCTGAAAGGTATAA AAAAAGAAAAATTAAAGAGAAAGTTTAGGGAAGCACTTTTCCCCGAAACGGATTCATTTTTAAAAAGCCTTTCAATCGGT TTAAAAAATCTCGTGAACCACCCGCTGGCTACGCTTAAGGCTTTAATCGGAAAAGGTAAGGTAGGCATTCCCGTTTATGA GGTATACGAAGGAGAAAGGTATGAACTGAAGTTCCTTGGAAATAAGTTTTTTTCGGATGAATACCTGTATTCTCTCTTTG ATATAAATACCGTGGGTGTAGACATACTGGTTCTTGAAGGTTTTAAAGATAAAATAGAGGAAGAGTACAGGAAAAAGGGC TTCTTTGACGTAAATGTAGAGTACGAACTTGAAGATCACAGGATTTTGATAAAGATAAAAGAAGGAGAAAGGTATAAAGC TAAGGTTTACATAAACGGGAAAAAAATAGAAATTCCTTACGATGAAGAGAAAATTCAAGACTTAATAAGTAAAGAAATCC AATACTTGGAAAAAATGGGTTACGTTACGGCAACATATGAACTTAAAAAGAAAATAAACAAAGATAAAAAAGAAGTGAAC GTTCACGTAAAAATCAACAAAGGAATGCGCTACATTGTTTGGAGCTTTAAAATAGAAAGTGAACTTTTCGAGGATTTAAA TGAAAAAATTTCACTTAAATTCCCGAAAGCCTTGGATTACGAAACTTTAGACGAGATTTACAAGGAAATAAATAAAAGGT TACGGGAAAAAGGATACTTTGACGCTAAGGTTTTCACAGATATAAGAATGCAAAAGGTAAAAGATGCTCTTTTGATGTTT TATAAAGTAAAAGTAATTCCAGGAGAAAGATACGAGTACGGAGATACACTAATTTACGGTCTTGAGAAGACAAGGTTAAA GGAAGCTGAGTACGTTCTGGAGAAAGAAAAGTACTTCTCAAAGGAAGTTGAAGAGAGAAGTGTATGGAACGCCATAGAAA GCGAAATCTTTAAAAGTTTAAGACTTGAAGATTACGTAGACAGGGAGAGTAAGAAAGTTCACAGACTTGCCTACTTTCAG GAGAAAAAGAGAGGGGTAATCGGACTTTCTGCGGGCTTTAACACCTTTGAAGGTTTTAAACTTTCAGCAGAACTAAGTCT GAGAAACCTCTTGGGAATAGGGCTTATAAACACAAATACCTTTTCCATAAGTGAGAAGTACGAACTCTACAGGGTAAGCT TCAAAGACAATTTTCTCTTTTCAAGGAGATTTTTCGGGGAAACGTCACTATTTAAGGATTACGAAGAGCATGACACGTAC GAATTATTTACGGAAGGCTTTGCCTTCTCTCTGGGATACAGGTTAAAACCCTTTACCTTTGTGGGTATTTCCTTCTCAAA CTTTGAGGCAAAGACCACAGGTGCGGAAAGGGACAAGGGAACTTACAGGAAATTGGGGCTGAGTTTTTCGGTAAAGGAAA GGTTTAGACTGGTACTTTTTAGGGGATACGGACACAGGAATTATTCAAAGATAGAACTTGAAGGAAAAATAAAGAAAGAA TTTTTTGAAAAATTCGGTTCAAGGCTGAAATTTTCTTACGGATATGCTACGAAAAAAGCACCAATATTTGAAAGATTTTT CCTCGGAGGATATAAGAGAATGAAGGGTTACACCTACGAGAGTATAGGTTCTCCCTTGGGCGGGAGACAAATGCTTTATA TTTCTCCCGAGATTTACTACCTTCTCAACAGAAACTTGGAACTCATAACATTCCTTGAGCTCGGAAAGGTAGAGAATAAA TTTCCGAGTCTTTACAAAAATATGAAAAAGGACATAGGCTTTTCCGCAGGTTTTAGAACGCCCGTGGGCCTTATAAGGGG TGATATAGCCTATCCCTTGGAAGATTTTAAGGTAAAGCCCTCGAGGCTTAAGTTTTACCTCTCGGTAGAGTTTTTCTTCT AA
Upstream 100 bases:
>100_bases TAAAGGTTAAACTCACCACTCACGAAGCTGGCGGGATAACGGAAAGAGATATTAAATTAGCAAAATCCATAGACGAGTTG GTGAAAGAAATACTAAAGCA
Downstream 100 bases:
>100_bases AGGTAGTAATCAATAAGCACCACAATAAAGAAAATTACACTTATCCAGCCGTTTACCGTAAAGAAGGCTTTGTTTATTTT TGACAAATCCCATGGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein
Number of amino acids: Translated: 853; Mature: 853
Protein sequence:
>853_residues MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKRKDKLLIYVERYPIIKEIKIK GNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKEIGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFE GVKKLQKKELIKASGLVIGSIFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGVDILVLEGFKDKIEEEYRKKG FFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPYDEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVN VHVKINKGMRYIVWSFKIESELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSLRLEDYVDRESKKVHRLAYFQ EKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNTFSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTY ELFTEGFAFSLGYRLKPFTFVGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYYLLNRNLELITFLELGKVENK FPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKPSRLKFYLSVEFFF
Sequences:
>Translated_853_residues MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKRKDKLLIYVERYPIIKEIKIK GNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKEIGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFE GVKKLQKKELIKASGLVIGSIFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGVDILVLEGFKDKIEEEYRKKG FFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPYDEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVN VHVKINKGMRYIVWSFKIESELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSLRLEDYVDRESKKVHRLAYFQ EKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNTFSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTY ELFTEGFAFSLGYRLKPFTFVGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYYLLNRNLELITFLELGKVENK FPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKPSRLKFYLSVEFFF >Mature_853_residues MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKRKDKLLIYVERYPIIKEIKIK GNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKEIGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFE GVKKLQKKELIKASGLVIGSIFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGVDILVLEGFKDKIEEEYRKKG FFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPYDEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVN VHVKINKGMRYIVWSFKIESELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSLRLEDYVDRESKKVHRLAYFQ EKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNTFSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTY ELFTEGFAFSLGYRLKPFTFVGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYYLLNRNLELITFLELGKVENK FPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKPSRLKFYLSVEFFF
Specific function: Unknown
COG id: COG0729
COG function: function code M; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100885; Mature: 100885
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKR CHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHC KDKLLIYVERYPIIKEIKIKGNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKE CCCEEEEEECCCCEEEEEECCCEEEECCHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHH IGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFEGVKKLQKKELIKASGLVIGS HCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE IFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG EECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGV HHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE DILVLEGFKDKIEEEYRKKGFFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPY EEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEECCEEEECCC DEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVNVHVKINKGMRYIVWSFKIES CHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEEHH ELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEE YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSL EEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEDYVDRESKKVHRLAYFQEKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNT CHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHHHHHHEEEEEECCE FSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTYELFTEGFAFSLGYRLKPFTF EEECCCEEEEEEEECCCEEEEHHHCCCHHHHCCHHHCCHHHHHHCCCEEECCCCCCCEEE VGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE EEEEECCCCCCCCCCCCCCCCHHHCCCCEEHHHHEEEEEEECCCCCCCEEEEECCCHHHH FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYY HHHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHCCCCHHHHCCCCCCCEEEEECCEEEE LLNRNLELITFLELGKVENKFPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKP EECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHCCCCC SRLKFYLSVEFFF CCEEEEEEEEEEC >Mature Secondary Structure MIFFLFLIFSLSFGFEVYIKSNYPLKKDNLRHVINEKNYAKILEMLKQIPEIREVRYEKR CHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHC KDKLLIYVERYPIIKEIKIKGNVFLRDEDVKNVLGIEEGIPLIEDNPKTYEEILEKYYKE CCCEEEEEECCCCEEEEEECCCEEEECCHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHH IGFLNADTKVNISLDDKGNAIFYINIREGNLYFLEDIQFEGVKKLQKKELIKASGLVIGS HCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE IFDIDKVEDAEENLENFYRKKGFFESFVYLKGIKKEKLKRKFREALFPETDSFLKSLSIG EECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH LKNLVNHPLATLKALIGKGKVGIPVYEVYEGERYELKFLGNKFFSDEYLYSLFDINTVGV HHHHHCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCE DILVLEGFKDKIEEEYRKKGFFDVNVEYELEDHRILIKIKEGERYKAKVYINGKKIEIPY EEEEECCHHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEECCEEEECCC DEEKIQDLISKEIQYLEKMGYVTATYELKKKINKDKKEVNVHVKINKGMRYIVWSFKIES CHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEEEHH ELFEDLNEKISLKFPKALDYETLDEIYKEINKRLREKGYFDAKVFTDIRMQKVKDALLMF HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEE YKVKVIPGERYEYGDTLIYGLEKTRLKEAEYVLEKEKYFSKEVEERSVWNAIESEIFKSL EEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLEDYVDRESKKVHRLAYFQEKKRGVIGLSAGFNTFEGFKLSAELSLRNLLGIGLINTNT CHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEHHHHHHHEEEEEECCE FSISEKYELYRVSFKDNFLFSRRFFGETSLFKDYEEHDTYELFTEGFAFSLGYRLKPFTF EEECCCEEEEEEEECCCEEEEHHHCCCHHHHCCHHHCCHHHHHHCCCEEECCCCCCCEEE VGISFSNFEAKTTGAERDKGTYRKLGLSFSVKERFRLVLFRGYGHRNYSKIELEGKIKKE EEEEECCCCCCCCCCCCCCCCHHHCCCCEEHHHHEEEEEEECCCCCCCEEEEECCCHHHH FFEKFGSRLKFSYGYATKKAPIFERFFLGGYKRMKGYTYESIGSPLGGRQMLYISPEIYY HHHHHCCCEEEEECCCCCCCCHHHHHHHCCHHHHCCCCHHHHCCCCCCCEEEEECCEEEE LLNRNLELITFLELGKVENKFPSLYKNMKKDIGFSAGFRTPVGLIRGDIAYPLEDFKVKP EECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHCCCCC SRLKFYLSVEFFF CCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA