Click here to switch to the map view.

The map label for this gene is yniC [C]

Identifier: 15603830

GI number: 15603830

Start: 2204454

End: 2204837

Strand: Reverse

Name: yniC [C]

Synonym: PM1965

Alternate gene names: 15603830

Gene position: 2204837-2204454 (Counterclockwise)

Preceding gene: 15603831

Following gene: 15603829

Centisome position: 97.67

GC content: 36.72

Gene sequence:

>384_bases
ATGTTGGGATTATATGAATTACTGCATTTCCTGAAAGCAAGACATATCAAAATGGCAGTCGCTACCTCATCTTTCCCCAA
AATAATTCAGGCAGTATTTGATAAATTAAAATTATGGGGTTACTTTATACTACAATGTAGTGCAGATGATGAGCAATTCG
GTAAACCACATCCCGCGGTATACTTGAAAACAATCCAAAAATTAGGTATTTCATCCAAGGAATGTCTTGTCATTGAAGAC
AGTGTTGTCAGTCTGATTGCTGCGAAAGCAGCAAATTTACGTACATTTATTGTGAATACTCATTACCAAAATGCTCAGTT
TGCTATTGCAGATGCACGATTACCCACACGACTAGATGTGATCAAAAAACTGGAAGACGATTAG

Upstream 100 bases:

>100_bases
TATTTGAATCCAACATTTTAATTTACCAACTACCACACAAAGATTAGCGGATACGATTTTAAATCATGCGTATCACGCTA
TTTTGCAAGAAGGCAAGCCG

Downstream 100 bases:

>100_bases
CAAGATAACACAAAAATATGCTTGCTAAGATATAGGAACAAAACATGAAACCTTTTGAAAGACAGCAGCATATTTTTAAT
TATTTAATGACAAATGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: HAD Family Hydrolase; Phosphoglycolate Phosphatase; HAD Superfamily Hydrolase; Phosphatase; Hydrolase CbbY/CbbZ/GpH/YieH Family; Beta-Phosphoglucomutase Family Hydrolase; 2-Deoxyglucose-6-Phosphate Hydrolase YniC; Beta-Phosphoglucomutase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Phosphatase YniC; With A Phosphatase-Like Domain; Haloacid Dehalogenase IA Family Protein; HAD Hydrolase Family IA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLGLYELLHFLKARHIKMAVATSSFPKIIQAVFDKLKLWGYFILQCSADDEQFGKPHPAVYLKTIQKLGISSKECLVIED
SVVSLIAAKAANLRTFIVNTHYQNAQFAIADARLPTRLDVIKKLEDD

Sequences:

>Translated_127_residues
MLGLYELLHFLKARHIKMAVATSSFPKIIQAVFDKLKLWGYFILQCSADDEQFGKPHPAVYLKTIQKLGISSKECLVIED
SVVSLIAAKAANLRTFIVNTHYQNAQFAIADARLPTRLDVIKKLEDD
>Mature_127_residues
MLGLYELLHFLKARHIKMAVATSSFPKIIQAVFDKLKLWGYFILQCSADDEQFGKPHPAVYLKTIQKLGISSKECLVIED
SVVSLIAAKAANLRTFIVNTHYQNAQFAIADARLPTRLDVIKKLEDD

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788021, Length=123, Percent_Identity=31.7073170731707, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14320; Mature: 14320

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLYELLHFLKARHIKMAVATSSFPKIIQAVFDKLKLWGYFILQCSADDEQFGKPHPAV
CCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCHH
YLKTIQKLGISSKECLVIEDSVVSLIAAKAANLRTFIVNTHYQNAQFAIADARLPTRLDV
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCHHHHH
IKKLEDD
HHHHCCC
>Mature Secondary Structure
MLGLYELLHFLKARHIKMAVATSSFPKIIQAVFDKLKLWGYFILQCSADDEQFGKPHPAV
CCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCCCHH
YLKTIQKLGISSKECLVIEDSVVSLIAAKAANLRTFIVNTHYQNAQFAIADARLPTRLDV
HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCHHHHH
IKKLEDD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA