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The map label for this gene is yceD [C]

Identifier: 15603776

GI number: 15603776

Start: 2151377

End: 2151901

Strand: Direct

Name: yceD [C]

Synonym: PM1911

Alternate gene names: 15603776

Gene position: 2151377-2151901 (Clockwise)

Preceding gene: 15603770

Following gene: 15603777

Centisome position: 95.3

GC content: 40.95

Gene sequence:

>525_bases
ATGCAAAAGGTAAAATTACCCCTAACTGTTGACCCAGTAAAAGATGCGCAGCGACGCTTAGATTATGACGGCTATTACGC
TATTAATCAGTTGACGCGCCTTAATGAGTCAGTAAGTAAAGTGCTCAGCGATGCACAGGTTAGATTATCGTTTTTTATTG
ATCCACAAAAATTAGTGGTCATGAAGGGGCAAGCAAGTGTAGAAGTAGAGTTAATCTGCCAACGTTGTGAAAAGCCCTTC
GTGCAAATGATTGACTGTACTTTTTGTTACAGTCCAGTGGCTAATTTGGATCAAGCCGATGTATTGCCCGAAATTTATGA
ACCAATCGAATTTAACGCGTTTGGGGAAATAGATTTAGTTGGTGCGATTGAAGATGAATTAATTTTAAGTCTGCCAATAG
TGCCAATGCATTCATCTGAACACTGTGAAGTGTCCGTGGCTGAACAGGTTTTTGGCGAATTGCCCGAAGCGCTGGCAAAA
AAACCGAACCCGTTCGCTGTATTAGCTAGTTTAAAGCAAAAGTAA

Upstream 100 bases:

>100_bases
GTGGAGAAAATCATTTTTCTTATACTTTCTCATGAGGTTCACGTAAAAAGTAATAATTTCCTTTGACTATTTTGTTCTCA
AACGGTAATATTCACGCCCT

Downstream 100 bases:

>100_bases
ATTTAGGAGTATAGCCAATGGCTGTTCAACAAAACAAAAAATCTCGTTCACGTCGTGATATGCGTCGTTCACACGATGCC
TTAACCACTGCTGCAATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQKVKLPLTVDPVKDAQRRLDYDGYYAINQLTRLNESVSKVLSDAQVRLSFFIDPQKLVVMKGQASVEVELICQRCEKPF
VQMIDCTFCYSPVANLDQADVLPEIYEPIEFNAFGEIDLVGAIEDELILSLPIVPMHSSEHCEVSVAEQVFGELPEALAK
KPNPFAVLASLKQK

Sequences:

>Translated_174_residues
MQKVKLPLTVDPVKDAQRRLDYDGYYAINQLTRLNESVSKVLSDAQVRLSFFIDPQKLVVMKGQASVEVELICQRCEKPF
VQMIDCTFCYSPVANLDQADVLPEIYEPIEFNAFGEIDLVGAIEDELILSLPIVPMHSSEHCEVSVAEQVFGELPEALAK
KPNPFAVLASLKQK
>Mature_174_residues
MQKVKLPLTVDPVKDAQRRLDYDGYYAINQLTRLNESVSKVLSDAQVRLSFFIDPQKLVVMKGQASVEVELICQRCEKPF
VQMIDCTFCYSPVANLDQADVLPEIYEPIEFNAFGEIDLVGAIEDELILSLPIVPMHSSEHCEVSVAEQVFGELPEALAK
KPNPFAVLASLKQK

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceD [H]

Homologues:

Organism=Escherichia coli, GI1787329, Length=174, Percent_Identity=62.0689655172414, Blast_Score=220, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19501; Mature: 19501

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVKLPLTVDPVKDAQRRLDYDGYYAINQLTRLNESVSKVLSDAQVRLSFFIDPQKLVV
CCCEECCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEE
MKGQASVEVELICQRCEKPFVQMIDCTFCYSPVANLDQADVLPEIYEPIEFNAFGEIDLV
EECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCCCCCCEEEE
GAIEDELILSLPIVPMHSSEHCEVSVAEQVFGELPEALAKKPNPFAVLASLKQK
ECCCCCEEEECCCEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MQKVKLPLTVDPVKDAQRRLDYDGYYAINQLTRLNESVSKVLSDAQVRLSFFIDPQKLVV
CCCEECCEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEE
MKGQASVEVELICQRCEKPFVQMIDCTFCYSPVANLDQADVLPEIYEPIEFNAFGEIDLV
EECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCCCCCCEEEE
GAIEDELILSLPIVPMHSSEHCEVSVAEQVFGELPEALAKKPNPFAVLASLKQK
ECCCCCEEEECCCEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]