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The map label for this gene is yjdF [H]

Identifier: 15603744

GI number: 15603744

Start: 2121187

End: 2121804

Strand: Direct

Name: yjdF [H]

Synonym: PM1879

Alternate gene names: 15603744

Gene position: 2121187-2121804 (Clockwise)

Preceding gene: 15603743

Following gene: 15603745

Centisome position: 93.96

GC content: 44.01

Gene sequence:

>618_bases
ATGTCCTTGACCACCAAACAGGTATTTCCTTGGCTGTTAGCACTCGTTGTGCTTGTCATCGCGATTTGGTCGAGCATTGA
ACCTGTTTCTCGGGCAGTGTGGTATGCTGAAGTATTACCCATTTTTTTGGTCTTTTTGGCTTTAGTCGTGAGCTATTCTC
GTTTTCAGTTCAGCAACCTTGCATATTTCTTAATGAGCTTATGGATGGTTTTACATCTTATTGGTGCTCACTATACGTTT
GAACAGGTACCTTTTGAGTGGGCAAATCGACTACTCGCCCCTTGGTTAGGCGAAGGACGTAATCATTTTGATCGCGTAGC
ACATTATGTTATTGGTTTTTACAGTTTTCCTATGGCGGAATGGTTGTTACGTCGTCGATTATGTGGTCCGATCTTAGCGG
GCTTTTTTGCCCTATTTTTTATTATGAGTATTGCGGCGGGCTATGAGTTGATTGAGTGGCAATATGCGGTGATTGCTGGT
GGTGAAGAGGGAATTGCCTTTTTAGGATCGCAGGGCGATCAGTGGGATGCGCAAAAAGATATTTTGGCAGATACATTCGG
GGCGTTAAGCGCGTTGGCATTGTTTTATCTCGTGAGAACGGATAAAACATGCGCGTAA

Upstream 100 bases:

>100_bases
CGAAAGGCTTGCCAAAAGAAATGTTAGAGATGGCAAAAGAGAAAACGCAGCAAATTCAATCTGCGTATGATTTAATTTGT
AAAACCAAAGGGTGGAAATA

Downstream 100 bases:

>100_bases
TTCTTGCTCCGATGCAAGGGGTATTAGACCCTTTTGTTCGTCAACTTCTCACACAGGTCAATCAGTATGATTTGTGTGTT
TCTGAATTTGTGCGGGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSLTTKQVFPWLLALVVLVIAIWSSIEPVSRAVWYAEVLPIFLVFLALVVSYSRFQFSNLAYFLMSLWMVLHLIGAHYTF
EQVPFEWANRLLAPWLGEGRNHFDRVAHYVIGFYSFPMAEWLLRRRLCGPILAGFFALFFIMSIAAGYELIEWQYAVIAG
GEEGIAFLGSQGDQWDAQKDILADTFGALSALALFYLVRTDKTCA

Sequences:

>Translated_205_residues
MSLTTKQVFPWLLALVVLVIAIWSSIEPVSRAVWYAEVLPIFLVFLALVVSYSRFQFSNLAYFLMSLWMVLHLIGAHYTF
EQVPFEWANRLLAPWLGEGRNHFDRVAHYVIGFYSFPMAEWLLRRRLCGPILAGFFALFFIMSIAAGYELIEWQYAVIAG
GEEGIAFLGSQGDQWDAQKDILADTFGALSALALFYLVRTDKTCA
>Mature_204_residues
SLTTKQVFPWLLALVVLVIAIWSSIEPVSRAVWYAEVLPIFLVFLALVVSYSRFQFSNLAYFLMSLWMVLHLIGAHYTFE
QVPFEWANRLLAPWLGEGRNHFDRVAHYVIGFYSFPMAEWLLRRRLCGPILAGFFALFFIMSIAAGYELIEWQYAVIAGG
EEGIAFLGSQGDQWDAQKDILADTFGALSALALFYLVRTDKTCA

Specific function: Unknown

COG id: COG3647

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790562, Length=194, Percent_Identity=31.9587628865979, Blast_Score=103, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014509 [H]

Pfam domain/function: PF09997 DUF2238 [H]

EC number: NA

Molecular weight: Translated: 23352; Mature: 23220

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTTKQVFPWLLALVVLVIAIWSSIEPVSRAVWYAEVLPIFLVFLALVVSYSRFQFSNL
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFLMSLWMVLHLIGAHYTFEQVPFEWANRLLAPWLGEGRNHFDRVAHYVIGFYSFPMAE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WLLRRRLCGPILAGFFALFFIMSIAAGYELIEWQYAVIAGGEEGIAFLGSQGDQWDAQKD
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEECCCCCCEEECCCCCCCCHHHH
ILADTFGALSALALFYLVRTDKTCA
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLTTKQVFPWLLALVVLVIAIWSSIEPVSRAVWYAEVLPIFLVFLALVVSYSRFQFSNL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFLMSLWMVLHLIGAHYTFEQVPFEWANRLLAPWLGEGRNHFDRVAHYVIGFYSFPMAE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WLLRRRLCGPILAGFFALFFIMSIAAGYELIEWQYAVIAGGEEGIAFLGSQGDQWDAQKD
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEECCCCCCEEECCCCCCCCHHHH
ILADTFGALSALALFYLVRTDKTCA
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2656658 [H]