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The map label for this gene is yfiO [C]

Identifier: 15603585

GI number: 15603585

Start: 1930602

End: 1931384

Strand: Direct

Name: yfiO [C]

Synonym: PM1720

Alternate gene names: 15603585

Gene position: 1930602-1931384 (Clockwise)

Preceding gene: 15603582

Following gene: 15603588

Centisome position: 85.52

GC content: 40.1

Gene sequence:

>783_bases
ATGCGTAAATTAAAATCGTTCACGTTTATTGCTTTAACCGCATTTGCTATCACTGCGTGTTCCGGCTCTAAAGATGTTGA
ACAGCGTCCAGAACAAGAGCTTTATAATGTTGGTCAAACGCATTTACAAAACGGAGATTATTCACAAGCAATCCGTTATT
TGGATGCTGTCCGTAGCCGTTTCCCTGGTAGTAGTTATAGTGAACAAACACTATTAAATTTGATTTATGCAAATTATAAA
ACGCAAGATTATACACAAACTTTAGTCTTAGCTGATCGTTTTTTCCAACAATATCCGACAAGCCGAAATTTAGATTATGT
CCTTTATATGGCAGGCTTAACGAATGCAGCATTAGGTGATAACTATATTCAAGATTTATTTAGAATCGATCGCGCTACAC
GTGAAAGTAGCTCAATCAAAGCCGCATTCGCGAACTTCCAGACCCTAGTGCAAAATTTCCCAAACAGTCCTTATGCACAA
GACGCGCTTGCTCGCATGGCGTATATTAAAGCCAGCCTTGCTCGTCATGAATTAGCGATTGCCAAATTCTATGCGAAACG
TGATGCACATGTTGCTGTGGCAAATCGTGTTGTAGGCATGCTACAACAATATCCAGATACACAAGCAACTTATGAAGCTT
TACCGCTGATGCAAGAGGCTTACGAAAAAATGAATTTAAACGATCTGGCTGCCAAAACTGCCGCGATTATCGAAGCCAAT
AAAGGCAGAACCTTTGCTGAAATCGAAAAACCGGCGGAGCCTGAAGGCTTATTAAAACAATAA

Upstream 100 bases:

>100_bases
AAAAAATCCATGAATGAGGTTTGCTTATTTAATAATGTTATATACAATAATGAGTCATTGTAACTCATTTATCATTGCTC
GTAAAAATAAGGATTATCTA

Downstream 100 bases:

>100_bases
ATCATGATTTAAAAATAGGACGAGCGTTACACTTTGTCCTATTTTTTTATGTCATTTATTCTGCAATCAAAATCTGTGCA
AGTGGCATATCCCAAGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRKLKSFTFIALTAFAITACSGSKDVEQRPEQELYNVGQTHLQNGDYSQAIRYLDAVRSRFPGSSYSEQTLLNLIYANYK
TQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGLTNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQ
DALARMAYIKASLARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKTAAIIEAN
KGRTFAEIEKPAEPEGLLKQ

Sequences:

>Translated_260_residues
MRKLKSFTFIALTAFAITACSGSKDVEQRPEQELYNVGQTHLQNGDYSQAIRYLDAVRSRFPGSSYSEQTLLNLIYANYK
TQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGLTNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQ
DALARMAYIKASLARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKTAAIIEAN
KGRTFAEIEKPAEPEGLLKQ
>Mature_260_residues
MRKLKSFTFIALTAFAITACSGSKDVEQRPEQELYNVGQTHLQNGDYSQAIRYLDAVRSRFPGSSYSEQTLLNLIYANYK
TQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGLTNAALGDNYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQ
DALARMAYIKASLARHELAIAKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKTAAIIEAN
KGRTFAEIEKPAEPEGLLKQ

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat

Homologues:

Organism=Escherichia coli, GI1788947, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=5e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1720_PASMU (Q9CKA5)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246659.1
- GeneID:   1245067
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1720
- NMPDR:   fig|272843.1.peg.1721
- HOGENOM:   HBG739476
- OMA:   ALARMAY
- ProtClustDB:   CLSK870586
- BioCyc:   PMUL272843:PM1720-MONOMER
- GO:   GO:0005488
- InterPro:   IPR017689
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10
- TIGRFAMs:   TIGR03302

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29350; Mature: 29350

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS50005 TPR; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKSFTFIALTAFAITACSGSKDVEQRPEQELYNVGQTHLQNGDYSQAIRYLDAVRSR
CCCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGLTNAALGD
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCH
NYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKASLARHELAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKTAAIIEAN
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECC
KGRTFAEIEKPAEPEGLLKQ
CCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRKLKSFTFIALTAFAITACSGSKDVEQRPEQELYNVGQTHLQNGDYSQAIRYLDAVRSR
CCCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FPGSSYSEQTLLNLIYANYKTQDYTQTLVLADRFFQQYPTSRNLDYVLYMAGLTNAALGD
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCH
NYIQDLFRIDRATRESSSIKAAFANFQTLVQNFPNSPYAQDALARMAYIKASLARHELAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKFYAKRDAHVAVANRVVGMLQQYPDTQATYEALPLMQEAYEKMNLNDLAAKTAAIIEAN
HHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECC
KGRTFAEIEKPAEPEGLLKQ
CCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100