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The map label for this gene is ydeU [H]

Identifier: 15603582

GI number: 15603582

Start: 1926140

End: 1928692

Strand: Direct

Name: ydeU [H]

Synonym: PM1717

Alternate gene names: 15603582

Gene position: 1926140-1928692 (Clockwise)

Preceding gene: 15603580

Following gene: 15603585

Centisome position: 85.32

GC content: 40.74

Gene sequence:

>2553_bases
ATGACTCATCTAAAAAAGTCTTCTTTACCACTAATTCTCACCTCCCTTTGTCTATCGTCAAATGTTTGGTCATCCGTTAA
TACAACATCTTGTGGTGAGGGATGCACAGTTACAGAAGAAATAGACACGGCAACTGACACACATATCATTACCATAGATG
GCGATAAAACCCGATCTTATTCCCACCACCTAGCCGTTTTAGAAGATAATAAAAGATACCGCCTGACAAATCATCTACAT
TTAGAGAATGGAGATTATAAAGTCAATGCGCCTGAAAGAAATAATGCGCGCAGTGCGGAAATTATTAACCATGGCAAACT
GATTAGCTCAGCCCCTGCTGGTGCCACCAGTGCAATTGATGCACAATGGGGCAATATTACTGAGAAATTGCATGTTACAA
ATTATGGCGAAATTCGAACAGATGGCTTAGGTAGCAATGAGTGTGCGATATGCTCTCGTTATTTTAAACGAAGCCCTAAT
GGCAATACTATATCAACACCGACAGAAGTGGTTTACGAAGTACATAATCTCGGTAAGGAGGCACAACTCTTAGCGAATGG
CGGACCGAGTATTTGGTTAGACAATGGTAAATTCACTCATATCAATAATGAAGGCACTATTCTTTCTAAAAGTACAAGGA
TTCCCGCCATCTTGATTCGACACAGTGCTCAAGTAGAACTCCAAAATCGTGGCAATATCAAATCGCTTGGTCACAGTGCT
GTTTTTATCCAAAATGCGAACAAGATAGACTTCATGAATAGTGGTAACCTCGAAAACAGTGATCCCACTAAAACCGTCGT
ATCATTGGGCGGAGAATCTGTCTCTCTCGTCAATGCAGGCAAGATCAGTTTTAGCCAGAACGACCCAACCAAACAAAGCC
GTGCTATTGGGTTAACGGGCAGTGAAAAAGTAGAACTGATTCTCAAAACCGGGTCAGAAATTGACGGGTTCGTGGCTACG
AGCGCTAACGGTAAAAACAATCAATTAATTTTGACAGAAACAGGGGAAGAACAGGGATTATTGTACGGTAAAAATAAATT
CCAGAATTTTCATGCCCTTACGATGCGTGGCGAAAAATGGACATTGTCCGATCCTTTTACTTTTAAAGAAACAATGTATG
CCGAATCAGGGCAACTCGTCTTGAAACAAGGTAGCTTAACGGCTGCAAATATCATATTAGGTGAAAAAAGTGAATTGATG
TTTGCCAGTGATTATGAATTAAACGGTAAATTCACCCATCAGGGTAAGTTTACATTCGCACATCATGAACCGACACCGGT
GTTTAAAAATGTGACTATCAATGAAGATTACCAAGGACATAACGGTACACTCCATTTATCTGCGGATTTTAATGGTACGA
CAAATCCAACCGACACTTTATTCATTCGAGGCAATGCAACAGGGAAAACACGCGTCGCGATTCACCATATTGGCGCTGAT
GCAGAAAACGCAGTCAACGGTGTCAAAATTATTGAAACAAACACCTCCACAGACAATGCGTTTGTCATTGATAATTATCT
GTCAAAAGGTGCGTTTGTGTATCATCTTGAGAAACGACATGAAACCAACCAAGATAATTGGTATTTGACTAGCTACATTG
GAGGGACACCAAGCTATCGCGCAGAAATGGCAAGCTATGCTAATAACCTCTATGCTGCCCACCAGCTTTTTCAACTACGT
CTTGAAGACCGTTTATCTCGTCATCATTTTTTAAATCAATCTGCCGACAAAACATTTTGGATACGTGCTGTTGAAGGAAC
AAATCACAATCGAATGCGTGATAACCAAAACACAACAAAAGCCCAACGTTATGTCACGCAATTAGGCAAAACTGTTATTA
ATCAAGCACATTATCATGCCGGTGTGATGTTCGGCTACGCCAAACAAAGCAGTAAAACACGCTCATCTCGTGTCGGGACT
TCACGCGGCAAAGTACAAGGTTATGCACTTGGTGTTTATGGTACTTGGTATCAAAACCCAAATGATGACACCGGCTTATA
CATTGACAGTTGGCTACAATATCAATGGTTCAAAAATCAAGTGATCAATCCAGCCTCGTCTAGCGATAATTATCGTACAC
AGGGACTGAGTGCCTCACTTGAGCTAGGCTATCACTTGCCACTCGTTCAATATACCGTAGCAGATCTGAAACATAGCCTC
AATATTCAGCCTCAAGCACAATTTATTTGGCAAAAGCTAAATAGCAAACAGCATAGAGATCCACAACAGACGCTGATTCA
TTATATAGGGCAGCAAAATACACAAACACGTCTTGGTGTCAGATTCAGTTTAGATAGCCATTTCTTAAACACGCAATGGA
ATTTAAAACCTTACTTTGAGGTGAATTGGCTACATCACGCAAAAGACTACGGCATCACCATCAATGACGTAGTAAACCAT
ATTGAAGGAGCAAAACAGCTATTTGAGTATAAGGCGGGTATCGCGTCTCAATTTGGTCGTCATCTGCGCTTTTGGCTAGA
CACCACACACCAAAGAGGAAAACAACAATTTAAAGATAATCAGCTTAATGTTGGTTTCAATATTCTGTTTTAA

Upstream 100 bases:

>100_bases
TTTTTACGTAATTTTAGCTCAATTATTGAACTAAAAATCTATTTTGTATAAAATTCATACATAACAAAAAACAAAATGAC
GTTAATACAGGACGTTTAAC

Downstream 100 bases:

>100_bases
CGAAATAATCAGGCTATTGAAATAAAAAGTGCGGTGAAAAAAACGGGATTTTTCACCGCACACGCTTATTGAGGTAATGC
TTGTTATTCAAACCAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 850; Mature: 849

Protein sequence:

>850_residues
MTHLKKSSLPLILTSLCLSSNVWSSVNTTSCGEGCTVTEEIDTATDTHIITIDGDKTRSYSHHLAVLEDNKRYRLTNHLH
LENGDYKVNAPERNNARSAEIINHGKLISSAPAGATSAIDAQWGNITEKLHVTNYGEIRTDGLGSNECAICSRYFKRSPN
GNTISTPTEVVYEVHNLGKEAQLLANGGPSIWLDNGKFTHINNEGTILSKSTRIPAILIRHSAQVELQNRGNIKSLGHSA
VFIQNANKIDFMNSGNLENSDPTKTVVSLGGESVSLVNAGKISFSQNDPTKQSRAIGLTGSEKVELILKTGSEIDGFVAT
SANGKNNQLILTETGEEQGLLYGKNKFQNFHALTMRGEKWTLSDPFTFKETMYAESGQLVLKQGSLTAANIILGEKSELM
FASDYELNGKFTHQGKFTFAHHEPTPVFKNVTINEDYQGHNGTLHLSADFNGTTNPTDTLFIRGNATGKTRVAIHHIGAD
AENAVNGVKIIETNTSTDNAFVIDNYLSKGAFVYHLEKRHETNQDNWYLTSYIGGTPSYRAEMASYANNLYAAHQLFQLR
LEDRLSRHHFLNQSADKTFWIRAVEGTNHNRMRDNQNTTKAQRYVTQLGKTVINQAHYHAGVMFGYAKQSSKTRSSRVGT
SRGKVQGYALGVYGTWYQNPNDDTGLYIDSWLQYQWFKNQVINPASSSDNYRTQGLSASLELGYHLPLVQYTVADLKHSL
NIQPQAQFIWQKLNSKQHRDPQQTLIHYIGQQNTQTRLGVRFSLDSHFLNTQWNLKPYFEVNWLHHAKDYGITINDVVNH
IEGAKQLFEYKAGIASQFGRHLRFWLDTTHQRGKQQFKDNQLNVGFNILF

Sequences:

>Translated_850_residues
MTHLKKSSLPLILTSLCLSSNVWSSVNTTSCGEGCTVTEEIDTATDTHIITIDGDKTRSYSHHLAVLEDNKRYRLTNHLH
LENGDYKVNAPERNNARSAEIINHGKLISSAPAGATSAIDAQWGNITEKLHVTNYGEIRTDGLGSNECAICSRYFKRSPN
GNTISTPTEVVYEVHNLGKEAQLLANGGPSIWLDNGKFTHINNEGTILSKSTRIPAILIRHSAQVELQNRGNIKSLGHSA
VFIQNANKIDFMNSGNLENSDPTKTVVSLGGESVSLVNAGKISFSQNDPTKQSRAIGLTGSEKVELILKTGSEIDGFVAT
SANGKNNQLILTETGEEQGLLYGKNKFQNFHALTMRGEKWTLSDPFTFKETMYAESGQLVLKQGSLTAANIILGEKSELM
FASDYELNGKFTHQGKFTFAHHEPTPVFKNVTINEDYQGHNGTLHLSADFNGTTNPTDTLFIRGNATGKTRVAIHHIGAD
AENAVNGVKIIETNTSTDNAFVIDNYLSKGAFVYHLEKRHETNQDNWYLTSYIGGTPSYRAEMASYANNLYAAHQLFQLR
LEDRLSRHHFLNQSADKTFWIRAVEGTNHNRMRDNQNTTKAQRYVTQLGKTVINQAHYHAGVMFGYAKQSSKTRSSRVGT
SRGKVQGYALGVYGTWYQNPNDDTGLYIDSWLQYQWFKNQVINPASSSDNYRTQGLSASLELGYHLPLVQYTVADLKHSL
NIQPQAQFIWQKLNSKQHRDPQQTLIHYIGQQNTQTRLGVRFSLDSHFLNTQWNLKPYFEVNWLHHAKDYGITINDVVNH
IEGAKQLFEYKAGIASQFGRHLRFWLDTTHQRGKQQFKDNQLNVGFNILF
>Mature_849_residues
THLKKSSLPLILTSLCLSSNVWSSVNTTSCGEGCTVTEEIDTATDTHIITIDGDKTRSYSHHLAVLEDNKRYRLTNHLHL
ENGDYKVNAPERNNARSAEIINHGKLISSAPAGATSAIDAQWGNITEKLHVTNYGEIRTDGLGSNECAICSRYFKRSPNG
NTISTPTEVVYEVHNLGKEAQLLANGGPSIWLDNGKFTHINNEGTILSKSTRIPAILIRHSAQVELQNRGNIKSLGHSAV
FIQNANKIDFMNSGNLENSDPTKTVVSLGGESVSLVNAGKISFSQNDPTKQSRAIGLTGSEKVELILKTGSEIDGFVATS
ANGKNNQLILTETGEEQGLLYGKNKFQNFHALTMRGEKWTLSDPFTFKETMYAESGQLVLKQGSLTAANIILGEKSELMF
ASDYELNGKFTHQGKFTFAHHEPTPVFKNVTINEDYQGHNGTLHLSADFNGTTNPTDTLFIRGNATGKTRVAIHHIGADA
ENAVNGVKIIETNTSTDNAFVIDNYLSKGAFVYHLEKRHETNQDNWYLTSYIGGTPSYRAEMASYANNLYAAHQLFQLRL
EDRLSRHHFLNQSADKTFWIRAVEGTNHNRMRDNQNTTKAQRYVTQLGKTVINQAHYHAGVMFGYAKQSSKTRSSRVGTS
RGKVQGYALGVYGTWYQNPNDDTGLYIDSWLQYQWFKNQVINPASSSDNYRTQGLSASLELGYHLPLVQYTVADLKHSLN
IQPQAQFIWQKLNSKQHRDPQQTLIHYIGQQNTQTRLGVRFSLDSHFLNTQWNLKPYFEVNWLHHAKDYGITINDVVNHI
EGAKQLFEYKAGIASQFGRHLRFWLDTTHQRGKQQFKDNQLNVGFNILF

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1788565, Length=497, Percent_Identity=25.1509054325956, Blast_Score=133, Evalue=4e-32,
Organism=Escherichia coli, GI48994897, Length=603, Percent_Identity=24.3781094527363, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 95187; Mature: 95056

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLKKSSLPLILTSLCLSSNVWSSVNTTSCGEGCTVTEEIDTATDTHIITIDGDKTRSY
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCC
SHHLAVLEDNKRYRLTNHLHLENGDYKVNAPERNNARSAEIINHGKLISSAPAGATSAID
CEEEEEEECCCEEEEEEEEEEECCCEEECCCCCCCCCCHHHEECCCEEECCCCCCCCCCC
AQWGNITEKLHVTNYGEIRTDGLGSNECAICSRYFKRSPNGNTISTPTEVVYEVHNLGKE
CCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCC
AQLLANGGPSIWLDNGKFTHINNEGTILSKSTRIPAILIRHSAQVELQNRGNIKSLGHSA
EEEEECCCCEEEECCCEEEEECCCCCEEECCCCCCEEEEECCCEEEECCCCCHHHCCCEE
VFIQNANKIDFMNSGNLENSDPTKTVVSLGGESVSLVNAGKISFSQNDPTKQSRAIGLTG
EEEECCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCEEEECCCCCCCHHCEEECCC
SEKVELILKTGSEIDGFVATSANGKNNQLILTETGEEQGLLYGKNKFQNFHALTMRGEKW
CCEEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCEE
TLSDPFTFKETMYAESGQLVLKQGSLTAANIILGEKSELMFASDYELNGKFTHQGKFTFA
ECCCCCCCHHHHCCCCCCEEEEECCCEEEEEEECCCCCEEEEECEEECCEEEECCEEEEE
HHEPTPVFKNVTINEDYQGHNGTLHLSADFNGTTNPTDTLFIRGNATGKTRVAIHHIGAD
CCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCC
AENAVNGVKIIETNTSTDNAFVIDNYLSKGAFVYHLEKRHETNQDNWYLTSYIGGTPSYR
HHHCCCCEEEEEECCCCCCEEEEECHHCCCEEEEEEEHHCCCCCCCEEEEEECCCCCHHH
AEMASYANNLYAAHQLFQLRLEDRLSRHHFLNQSADKTFWIRAVEGTNHNRMRDNQNTTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHH
AQRYVTQLGKTVINQAHYHAGVMFGYAKQSSKTRSSRVGTSRGKVQGYALGVYGTWYQNP
HHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCHHHHCCCCCCCEEEEEEEEEEEECCCC
NDDTGLYIDSWLQYQWFKNQVINPASSSDNYRTQGLSASLELGYHLPLVQYTVADLKHSL
CCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHC
NIQPQAQFIWQKLNSKQHRDPQQTLIHYIGQQNTQTRLGVRFSLDSHFLNTQWNLKPYFE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCEECCCCCCCCEEE
VNWLHHAKDYGITINDVVNHIEGAKQLFEYKAGIASQFGRHLRFWLDTTHQRGKQQFKDN
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCC
QLNVGFNILF
CEECCEEEEC
>Mature Secondary Structure 
THLKKSSLPLILTSLCLSSNVWSSVNTTSCGEGCTVTEEIDTATDTHIITIDGDKTRSY
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCC
SHHLAVLEDNKRYRLTNHLHLENGDYKVNAPERNNARSAEIINHGKLISSAPAGATSAID
CEEEEEEECCCEEEEEEEEEEECCCEEECCCCCCCCCCHHHEECCCEEECCCCCCCCCCC
AQWGNITEKLHVTNYGEIRTDGLGSNECAICSRYFKRSPNGNTISTPTEVVYEVHNLGKE
CCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCC
AQLLANGGPSIWLDNGKFTHINNEGTILSKSTRIPAILIRHSAQVELQNRGNIKSLGHSA
EEEEECCCCEEEECCCEEEEECCCCCEEECCCCCCEEEEECCCEEEECCCCCHHHCCCEE
VFIQNANKIDFMNSGNLENSDPTKTVVSLGGESVSLVNAGKISFSQNDPTKQSRAIGLTG
EEEECCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCEEEECCCCCCCHHCEEECCC
SEKVELILKTGSEIDGFVATSANGKNNQLILTETGEEQGLLYGKNKFQNFHALTMRGEKW
CCEEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCEE
TLSDPFTFKETMYAESGQLVLKQGSLTAANIILGEKSELMFASDYELNGKFTHQGKFTFA
ECCCCCCCHHHHCCCCCCEEEEECCCEEEEEEECCCCCEEEEECEEECCEEEECCEEEEE
HHEPTPVFKNVTINEDYQGHNGTLHLSADFNGTTNPTDTLFIRGNATGKTRVAIHHIGAD
CCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCC
AENAVNGVKIIETNTSTDNAFVIDNYLSKGAFVYHLEKRHETNQDNWYLTSYIGGTPSYR
HHHCCCCEEEEEECCCCCCEEEEECHHCCCEEEEEEEHHCCCCCCCEEEEEECCCCCHHH
AEMASYANNLYAAHQLFQLRLEDRLSRHHFLNQSADKTFWIRAVEGTNHNRMRDNQNTTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHH
AQRYVTQLGKTVINQAHYHAGVMFGYAKQSSKTRSSRVGTSRGKVQGYALGVYGTWYQNP
HHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCHHHHCCCCCCCEEEEEEEEEEEECCCC
NDDTGLYIDSWLQYQWFKNQVINPASSSDNYRTQGLSASLELGYHLPLVQYTVADLKHSL
CCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHHHHHHHHHHC
NIQPQAQFIWQKLNSKQHRDPQQTLIHYIGQQNTQTRLGVRFSLDSHFLNTQWNLKPYFE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCEECCCCCCCCEEE
VNWLHHAKDYGITINDVVNHIEGAKQLFEYKAGIASQFGRHLRFWLDTTHQRGKQQFKDN
EEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHCCC
QLNVGFNILF
CEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]