| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yyaM [H]
Identifier: 15603563
GI number: 15603563
Start: 1905442
End: 1906347
Strand: Direct
Name: yyaM [H]
Synonym: PM1698
Alternate gene names: 15603563
Gene position: 1905442-1906347 (Clockwise)
Preceding gene: 15603562
Following gene: 15603569
Centisome position: 84.41
GC content: 40.84
Gene sequence:
>906_bases ATGACGAACAAACAAGGTTATGGCTATTTTTGCTTACTGTTAGCCACCTTCTTTTGGGGCGGTAACTACCTATTTGGCAA AATACTCAGCACGGACATTCCACCCATTGTGTTAAATTATGCTCGTTGGTTTCCGGCTGCCTTAATCTTATTGCTATTAT TTAGTAAACGTAGCTGCCAATTTACGCCCGTGATCCGTCAGCATTGGCGAATTTTGATCGCACTTTCTCTGCTGGGTATT GTGATTTTCCCAGTATTTTTATATCAAGGTTTACAAACTACAACGTCGCTCAATGCCAGTATTTACCTCGCGGTAGTCCC TATTTTTGTCTTATTTCTCAACCGCCTTGTCTTTGGTGACCCTATTAATTTTACGGGATTGACTGGTGCATTGTTTAGTT TTGTTGGGGTTCTTTGGCTACTTAGCCGAGGCGATATACAACGTCTAACTCAATTAGAAGTGAATCAAGGGGATTTATGG GCACTCGGCTCTGCACTGAGTTGGTCTATTTATTGTTGTCTGATTCGTCTTAAACCAGCACAATTACCCAATACAGTGCT GTTAACTACGTTAGTTTGTATGGCAATGTTACTTTTTACCCCGCTCTTCATTTGGCAATATCAACAATTGCCACCTGCAT TTTTCTCTACGTTAACACCAACACAATATAGCATTATTACTTATTTAATCATCGGTCCATCGATCCTATCTTATGGCTTT TGGAACTATGGGATTTCGCTAGTGGGTGCGGATAAAGGCGCTGCCTTTACAAATGCCACACCGTTATTTGCAGCATTATT AGGGGTATTAGTGTTAAATGAAGCTCTTGCGTTCTACCATATGATCAGTGCGGGTTTAATCATTACTGGGCTATTACTTT GTAACCGAAAATCGTGCTCGTCTTAG
Upstream 100 bases:
>100_bases AACAACGCTTTGGCATCCGCTGGTTACGTTTAAAATTGAGTAAACCGAAAGCCGTGGCACAAGCACGTAATGTCGGCATC ATTATTGAGCGCGGAATACG
Downstream 100 bases:
>100_bases AGAAGCATTTCTACTTAATCGTTAAAACCAGTGCTTTTTGTCTTCTCGAAATTGGGGAATGTCGCCCTGTTCATAAGGAT TATAATGTTCACGATGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTNKQGYGYFCLLLATFFWGGNYLFGKILSTDIPPIVLNYARWFPAALILLLLFSKRSCQFTPVIRQHWRILIALSLLGI VIFPVFLYQGLQTTTSLNASIYLAVVPIFVLFLNRLVFGDPINFTGLTGALFSFVGVLWLLSRGDIQRLTQLEVNQGDLW ALGSALSWSIYCCLIRLKPAQLPNTVLLTTLVCMAMLLFTPLFIWQYQQLPPAFFSTLTPTQYSIITYLIIGPSILSYGF WNYGISLVGADKGAAFTNATPLFAALLGVLVLNEALAFYHMISAGLIITGLLLCNRKSCSS
Sequences:
>Translated_301_residues MTNKQGYGYFCLLLATFFWGGNYLFGKILSTDIPPIVLNYARWFPAALILLLLFSKRSCQFTPVIRQHWRILIALSLLGI VIFPVFLYQGLQTTTSLNASIYLAVVPIFVLFLNRLVFGDPINFTGLTGALFSFVGVLWLLSRGDIQRLTQLEVNQGDLW ALGSALSWSIYCCLIRLKPAQLPNTVLLTTLVCMAMLLFTPLFIWQYQQLPPAFFSTLTPTQYSIITYLIIGPSILSYGF WNYGISLVGADKGAAFTNATPLFAALLGVLVLNEALAFYHMISAGLIITGLLLCNRKSCSS >Mature_300_residues TNKQGYGYFCLLLATFFWGGNYLFGKILSTDIPPIVLNYARWFPAALILLLLFSKRSCQFTPVIRQHWRILIALSLLGIV IFPVFLYQGLQTTTSLNASIYLAVVPIFVLFLNRLVFGDPINFTGLTGALFSFVGVLWLLSRGDIQRLTQLEVNQGDLWA LGSALSWSIYCCLIRLKPAQLPNTVLLTTLVCMAMLLFTPLFIWQYQQLPPAFFSTLTPTQYSIITYLIIGPSILSYGFW NYGISLVGADKGAAFTNATPLFAALLGVLVLNEALAFYHMISAGLIITGLLLCNRKSCSS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33471; Mature: 33340
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKQGYGYFCLLLATFFWGGNYLFGKILSTDIPPIVLNYARWFPAALILLLLFSKRSCQ CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC FTPVIRQHWRILIALSLLGIVIFPVFLYQGLQTTTSLNASIYLAVVPIFVLFLNRLVFGD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PINFTGLTGALFSFVGVLWLLSRGDIQRLTQLEVNQGDLWALGSALSWSIYCCLIRLKPA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCC QLPNTVLLTTLVCMAMLLFTPLFIWQYQQLPPAFFSTLTPTQYSIITYLIIGPSILSYGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WNYGISLVGADKGAAFTNATPLFAALLGVLVLNEALAFYHMISAGLIITGLLLCNRKSCS HHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC S C >Mature Secondary Structure TNKQGYGYFCLLLATFFWGGNYLFGKILSTDIPPIVLNYARWFPAALILLLLFSKRSCQ CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC FTPVIRQHWRILIALSLLGIVIFPVFLYQGLQTTTSLNASIYLAVVPIFVLFLNRLVFGD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC PINFTGLTGALFSFVGVLWLLSRGDIQRLTQLEVNQGDLWALGSALSWSIYCCLIRLKPA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEECCC QLPNTVLLTTLVCMAMLLFTPLFIWQYQQLPPAFFSTLTPTQYSIITYLIIGPSILSYGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH WNYGISLVGADKGAAFTNATPLFAALLGVLVLNEALAFYHMISAGLIITGLLLCNRKSCS HHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]