| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is 15603541
Identifier: 15603541
GI number: 15603541
Start: 1882869
End: 1883393
Strand: Direct
Name: 15603541
Synonym: PM1676
Alternate gene names: NA
Gene position: 1882869-1883393 (Clockwise)
Preceding gene: 15603540
Following gene: 15603542
Centisome position: 83.41
GC content: 39.43
Gene sequence:
>525_bases ATGCGAAAATTTTTTAAATACTTTTTTCTGACGGTGATTTTTGTTTTTCACCTCGTCTTATTCGCAACCGTGAATTTCGT CACACCAAGTTATGAAGTGACTAAAGTGACGGGGGTCGAGGTGAAACGGGTCGATAAAGATGGTCCGATCACGAAAGCCA ATCCAGCCGATGGTCCAACCCGTGACGTCTATTTTATTAATACACAAAACCAAGATGGCAAGATTATGGTTTACCGCAAT GAGGACACGCGTTGGGGTTTCCCATTCTATTTCAAATTTGGCTCAGCCAATTTACATGCTGAGGCAGAAGCATTAATTAA AGAAGGACAGAAAGTACAAATTAAATACTATGGATGGCGTTTAGTGATGTTTGATGAATTCCGTAATGCGCTCAATATTA AAGCAGTGGATGAACATGCCTCACCATCACATCCAATTTTCGCCTACATTTTGTATTTTATATTACTCATTACGCTTTTC TTTTCAGTCCAATTCATTCGTGGCTGGTTTGATAGCGAAAACTAG
Upstream 100 bases:
>100_bases TTGCCCAACTCACTACACAAAACTTTGAACGTTTGTTCAAAATTAATGTACAATAAATCAACTATATACTGGGTGGATAA TACTTATTAAGGGAAATACG
Downstream 100 bases:
>100_bases CGCCTCTTTTCTCTCACGTGGTTTAATCTCACATTAAGCCACGTTTTGTTTCTTCCTAGCCTCCCTTACCGTTCAAAACA GAGATATTTTATGAGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRKFFKYFFLTVIFVFHLVLFATVNFVTPSYEVTKVTGVEVKRVDKDGPITKANPADGPTRDVYFINTQNQDGKIMVYRN EDTRWGFPFYFKFGSANLHAEAEALIKEGQKVQIKYYGWRLVMFDEFRNALNIKAVDEHASPSHPIFAYILYFILLITLF FSVQFIRGWFDSEN
Sequences:
>Translated_174_residues MRKFFKYFFLTVIFVFHLVLFATVNFVTPSYEVTKVTGVEVKRVDKDGPITKANPADGPTRDVYFINTQNQDGKIMVYRN EDTRWGFPFYFKFGSANLHAEAEALIKEGQKVQIKYYGWRLVMFDEFRNALNIKAVDEHASPSHPIFAYILYFILLITLF FSVQFIRGWFDSEN >Mature_174_residues MRKFFKYFFLTVIFVFHLVLFATVNFVTPSYEVTKVTGVEVKRVDKDGPITKANPADGPTRDVYFINTQNQDGKIMVYRN EDTRWGFPFYFKFGSANLHAEAEALIKEGQKVQIKYYGWRLVMFDEFRNALNIKAVDEHASPSHPIFAYILYFILLITLF FSVQFIRGWFDSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011088 [H]
Pfam domain/function: PF07509 DUF1523 [H]
EC number: NA
Molecular weight: Translated: 20429; Mature: 20429
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFFKYFFLTVIFVFHLVLFATVNFVTPSYEVTKVTGVEVKRVDKDGPITKANPADGPT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCC RDVYFINTQNQDGKIMVYRNEDTRWGFPFYFKFGSANLHAEAEALIKEGQKVQIKYYGWR CEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEEEEE LVMFDEFRNALNIKAVDEHASPSHPIFAYILYFILLITLFFSVQFIRGWFDSEN EEEEHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRKFFKYFFLTVIFVFHLVLFATVNFVTPSYEVTKVTGVEVKRVDKDGPITKANPADGPT CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCC RDVYFINTQNQDGKIMVYRNEDTRWGFPFYFKFGSANLHAEAEALIKEGQKVQIKYYGWR CEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEEEEEE LVMFDEFRNALNIKAVDEHASPSHPIFAYILYFILLITLFFSVQFIRGWFDSEN EEEEHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]