| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is serB [H]
Identifier: 15603522
GI number: 15603522
Start: 1864305
End: 1865267
Strand: Reverse
Name: serB [H]
Synonym: PM1657
Alternate gene names: 15603522
Gene position: 1865267-1864305 (Counterclockwise)
Preceding gene: 161723307
Following gene: 15603521
Centisome position: 82.63
GC content: 40.91
Gene sequence:
>963_bases ATGCAAACACAAAATCTTGCGACGATTACGCAATTTTTTTCTTCTTTCCCTTGTTCGATTACGAGTAGTGAACCAGTAAC GGAAGGGAAAACACACATTGTTGTCTATGGAGAAACCTTAAATCTGCTCAAGCTTCGTCAATTTCAACAAAAGTGCGGTG AAAATTTCATTATTTTAGAAGCTTGGAATGTATTACACAATACGGTCGTATTATTACGAGGGGATTGGCACACACAGTGG CTCGATTATGCACATGAATTGGGCCTTGATTGTGCATTATTGGATTTTAGTCCTCGTTTAGCACAAGCCGGGTTGTTAGT GATGGATATGGATTCCACGGCAATTCAAATTGAATGTATTGATGAGATTGCAAAATTAGCTGGAACCGGGGAGTTGGTTT CTTCCATTACGGCACAAGCCATGCGTGGCGAGTTAGACTTTGAACAAAGTTTACGTCGTCGTGTGAGTACTTTAAAAGGG GCGCCTGAAACGATTTTGAAGACAGTACGTGATAACTTACCTTTAATGCCCGGTTTAGAAGACACATTAGCAGTATTACA ACAATATGGTTGGAAAACGGCGATTGCTTCAGGTGGTTTTACGTATTTTACTGATTATCTCAAACAGCGTTTGAAGTTAG ATTATACCGTTGCAAATCAGTTTGCTATTGAAGAAGGGATACTGACTGGTGAAGTCGCGGGTGACGTGGTTGATGCACAG TATAAAGCACGTACTTTAGGCGAGTTAGCAGAAAAATTTAACATTGCTTTACAGCAAACGGTGGCGATTGGCGATGGCGC AAATGATCTGGCTATGCTAAGTGTAGCAGGTATGGGCGTTGCATTACATGCCAAGCCGAAGGTACAACAACAAGCCAAAG TTGTGGTAAACTTTGCAGACTTTAGCGCACTGTTATGTTTACTGAGTGCAAATGATAAATTGGTTAAAGCAAATAAGGAG TAA
Upstream 100 bases:
>100_bases TTTTTCTTTGGTTAAATGCAAGTTATTTTTTCCTAAAGATAAGTAAATGGGCTAGAATACCAACACGTTATTTTCAGCTC GACAATTTACAGGATTTTCT
Downstream 100 bases:
>100_bases TGATTTATGCCTTCTTTTGATATCGTATCTGAAATTACCTTACATGAAGTGCGCAATGCCGTCGAAAATGCCAATCGTGA TTTGACGAATCGCTGGGATT
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MQTQNLATITQFFSSFPCSITSSEPVTEGKTHIVVYGETLNLLKLRQFQQKCGENFIILEAWNVLHNTVVLLRGDWHTQW LDYAHELGLDCALLDFSPRLAQAGLLVMDMDSTAIQIECIDEIAKLAGTGELVSSITAQAMRGELDFEQSLRRRVSTLKG APETILKTVRDNLPLMPGLEDTLAVLQQYGWKTAIASGGFTYFTDYLKQRLKLDYTVANQFAIEEGILTGEVAGDVVDAQ YKARTLGELAEKFNIALQQTVAIGDGANDLAMLSVAGMGVALHAKPKVQQQAKVVVNFADFSALLCLLSANDKLVKANKE
Sequences:
>Translated_320_residues MQTQNLATITQFFSSFPCSITSSEPVTEGKTHIVVYGETLNLLKLRQFQQKCGENFIILEAWNVLHNTVVLLRGDWHTQW LDYAHELGLDCALLDFSPRLAQAGLLVMDMDSTAIQIECIDEIAKLAGTGELVSSITAQAMRGELDFEQSLRRRVSTLKG APETILKTVRDNLPLMPGLEDTLAVLQQYGWKTAIASGGFTYFTDYLKQRLKLDYTVANQFAIEEGILTGEVAGDVVDAQ YKARTLGELAEKFNIALQQTVAIGDGANDLAMLSVAGMGVALHAKPKVQQQAKVVVNFADFSALLCLLSANDKLVKANKE >Mature_320_residues MQTQNLATITQFFSSFPCSITSSEPVTEGKTHIVVYGETLNLLKLRQFQQKCGENFIILEAWNVLHNTVVLLRGDWHTQW LDYAHELGLDCALLDFSPRLAQAGLLVMDMDSTAIQIECIDEIAKLAGTGELVSSITAQAMRGELDFEQSLRRRVSTLKG APETILKTVRDNLPLMPGLEDTLAVLQQYGWKTAIASGGFTYFTDYLKQRLKLDYTVANQFAIEEGILTGEVAGDVVDAQ YKARTLGELAEKFNIALQQTVAIGDGANDLAMLSVAGMGVALHAKPKVQQQAKVVVNFADFSALLCLLSANDKLVKANKE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=176, Percent_Identity=29.5454545454545, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI1790849, Length=311, Percent_Identity=51.1254019292604, Blast_Score=310, Evalue=6e-86, Organism=Saccharomyces cerevisiae, GI6321647, Length=210, Percent_Identity=39.0476190476191, Blast_Score=147, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 35133; Mature: 35133
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTQNLATITQFFSSFPCSITSSEPVTEGKTHIVVYGETLNLLKLRQFQQKCGENFIILE CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEE AWNVLHNTVVLLRGDWHTQWLDYAHELGLDCALLDFSPRLAQAGLLVMDMDSTAIQIECI EHHHHHCEEEEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHCCEEEEECCCCEEEEHHH DEIAKLAGTGELVSSITAQAMRGELDFEQSLRRRVSTLKGAPETILKTVRDNLPLMPGLE HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCH DTLAVLQQYGWKTAIASGGFTYFTDYLKQRLKLDYTVANQFAIEEGILTGEVAGDVVDAQ HHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECHHHCCHHHHH YKARTLGELAEKFNIALQQTVAIGDGANDLAMLSVAGMGVALHAKPKVQQQAKVVVNFAD HHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHEEECCCCEEEECCCCHHHHHHHEEEHHH FSALLCLLSANDKLVKANKE HHHHHHHHCCCCCEEECCCC >Mature Secondary Structure MQTQNLATITQFFSSFPCSITSSEPVTEGKTHIVVYGETLNLLKLRQFQQKCGENFIILE CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEE AWNVLHNTVVLLRGDWHTQWLDYAHELGLDCALLDFSPRLAQAGLLVMDMDSTAIQIECI EHHHHHCEEEEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHCCEEEEECCCCEEEEHHH DEIAKLAGTGELVSSITAQAMRGELDFEQSLRRRVSTLKGAPETILKTVRDNLPLMPGLE HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCH DTLAVLQQYGWKTAIASGGFTYFTDYLKQRLKLDYTVANQFAIEEGILTGEVAGDVVDAQ HHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECHHHCCHHHHH YKARTLGELAEKFNIALQQTVAIGDGANDLAMLSVAGMGVALHAKPKVQQQAKVVVNFAD HHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHEEECCCCEEEECCCCHHHHHHHEEEHHH FSALLCLLSANDKLVKANKE HHHHHHHHCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]