| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is tal_2
Identifier: 15603504
GI number: 15603504
Start: 1848716
End: 1849666
Strand: Reverse
Name: tal_2
Synonym: PM1639
Alternate gene names: 15603504
Gene position: 1849666-1848716 (Counterclockwise)
Preceding gene: 15603505
Following gene: 15603503
Centisome position: 81.93
GC content: 39.43
Gene sequence:
>951_bases ATGACACAATTAGATTCGTTACGCAGTATGACGGTTGTTGTCGCAGATACTGGTGATATTGAAGCAATTAAGCAATATCA GCCACAAGATGCAACAACAAATCCTTCTTTGATTTTAAGTGCTTCTGCATTGCCCCAGTATGCGCCATTAATTGATGACG CCATTGCTTATGCGAAAACAAAAAGTGATTGTCCACGCCAGCAATTGGTTGATGCTGAAGATAAACTGGCCGTTAATATC GGCTTAGAAATACTCAAAATTATCCCCGGACGGATTTCTACAGAAGTCGATGCAAGGCTTTCGTATGATACACAAGCGAC TATTGAGAAAGCGCGTAAATTGATCAAGCTTTATAATGAAGCGGGAATAGAGAATCATCGGATCCTCATCAAAATTGCTT CAACTTGGCAAGGTATTCGTGCTGCAGAAGTGCTTGAGAAAGAAGGAATTAATTGTAACTTGACGTTGTTGTTTTCTGAA GCACAAGCGAGAGCTTGTGCTGAAGCCGGTGTGTATTTAATTTCACCGTTTGTAGGGCGAATTTTAGATTGGCATAAAGC AAATACGGGTAGACAAGATTATCCGGCTGCGGAAGATCCAGGTGTGATTTCCGTGACTCAAATTTATAATTATTATAAAC AACATAATTATAAGACGGTTGTCATGGGCGCAAGTTTCCGAAATGTAGATGAAATTATTGAGTTAGCAGGATGTGATCGT TTGACGATTTCACCTACTTTATTGAGTCATTTACAAGCAAGAGAAGGGGAACTTGTTCGTAAGTTAGCATTCAGCGGCGA GTTAAAAGACAGACCTCAACCTTTAACAGAGAGCGAGTTTTATTGGCAACATAACAGCGATCCAATGGCTGTTGCAAAAT TAGCAGAAGGCATTTGTAAATTTGCAGAAGATCAAGAAAAACTAGAAAAAATGCTCTTGGAAAGACTATAA
Upstream 100 bases:
>100_bases CTAATCAATATCAAATTATTGTAGGTCCTAAATGGGTAGAAAAAATTTATAGCGAAATGAAAGCGTTATTAGAAACAGAA TAGATGATAGGGAGAAGAGC
Downstream 100 bases:
>100_bases CATGTTGAATAAGAGGGAGTAATCACTATGGCAACACGTAGAGAACTGGCCAATGCCATTCGTTTTTTAAGTATGGATGC AGTGCAAAAAGCAAAATCAG
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTQLDSLRSMTVVVADTGDIEAIKQYQPQDATTNPSLILSASALPQYAPLIDDAIAYAKTKSDCPRQQLVDAEDKLAVNI GLEILKIIPGRISTEVDARLSYDTQATIEKARKLIKLYNEAGIENHRILIKIASTWQGIRAAEVLEKEGINCNLTLLFSE AQARACAEAGVYLISPFVGRILDWHKANTGRQDYPAAEDPGVISVTQIYNYYKQHNYKTVVMGASFRNVDEIIELAGCDR LTISPTLLSHLQAREGELVRKLAFSGELKDRPQPLTESEFYWQHNSDPMAVAKLAEGICKFAEDQEKLEKMLLERL
Sequences:
>Translated_316_residues MTQLDSLRSMTVVVADTGDIEAIKQYQPQDATTNPSLILSASALPQYAPLIDDAIAYAKTKSDCPRQQLVDAEDKLAVNI GLEILKIIPGRISTEVDARLSYDTQATIEKARKLIKLYNEAGIENHRILIKIASTWQGIRAAEVLEKEGINCNLTLLFSE AQARACAEAGVYLISPFVGRILDWHKANTGRQDYPAAEDPGVISVTQIYNYYKQHNYKTVVMGASFRNVDEIIELAGCDR LTISPTLLSHLQAREGELVRKLAFSGELKDRPQPLTESEFYWQHNSDPMAVAKLAEGICKFAEDQEKLEKMLLERL >Mature_315_residues TQLDSLRSMTVVVADTGDIEAIKQYQPQDATTNPSLILSASALPQYAPLIDDAIAYAKTKSDCPRQQLVDAEDKLAVNIG LEILKIIPGRISTEVDARLSYDTQATIEKARKLIKLYNEAGIENHRILIKIASTWQGIRAAEVLEKEGINCNLTLLFSEA QARACAEAGVYLISPFVGRILDWHKANTGRQDYPAAEDPGVISVTQIYNYYKQHNYKTVVMGASFRNVDEIIELAGCDRL TISPTLLSHLQAREGELVRKLAFSGELKDRPQPLTESEFYWQHNSDPMAVAKLAEGICKFAEDQEKLEKMLLERL
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI5803187, Length=318, Percent_Identity=59.4339622641509, Blast_Score=367, Evalue=1e-101, Organism=Escherichia coli, GI1786189, Length=310, Percent_Identity=74.1935483870968, Blast_Score=481, Evalue=1e-137, Organism=Escherichia coli, GI1788807, Length=316, Percent_Identity=62.6582278481013, Blast_Score=410, Evalue=1e-116, Organism=Caenorhabditis elegans, GI25153750, Length=316, Percent_Identity=57.2784810126582, Blast_Score=346, Evalue=8e-96, Organism=Caenorhabditis elegans, GI25153752, Length=162, Percent_Identity=54.320987654321, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17570473, Length=94, Percent_Identity=47.8723404255319, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323386, Length=301, Percent_Identity=59.1362126245847, Blast_Score=316, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6321480, Length=323, Percent_Identity=50.7739938080495, Blast_Score=315, Evalue=7e-87, Organism=Drosophila melanogaster, GI45549185, Length=315, Percent_Identity=59.0476190476191, Blast_Score=368, Evalue=1e-102,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): TALB_PASMU (Q9CKH9)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246578.1 - ProteinModelPortal: Q9CKH9 - SMR: Q9CKH9 - PRIDE: Q9CKH9 - GeneID: 1244986 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1639 - NMPDR: fig|272843.1.peg.1640 - HOGENOM: HBG286747 - OMA: DWHKAKT - ProtClustDB: PRK05269 - BioCyc: PMUL272843:PM1639-MONOMER - BRENDA: 2.2.1.2 - GO: GO:0005737 - HAMAP: MF_00492 - InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR10683 - PANTHER: PTHR10683:SF3 - TIGRFAMs: TIGR00874
Pfam domain/function: PF00923 Transaldolase
EC number: =2.2.1.2
Molecular weight: Translated: 35255; Mature: 35123
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2
Important sites: ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLDSLRSMTVVVADTGDIEAIKQYQPQDATTNPSLILSASALPQYAPLIDDAIAYAKT CCCHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHC KSDCPRQQLVDAEDKLAVNIGLEILKIIPGRISTEVDARLSYDTQATIEKARKLIKLYNE CCCCCHHHHCCCCHHEEEHHHHHHHHHCCCCCCCCHHCEECCCHHHHHHHHHHHHHHHHH AGIENHRILIKIASTWQGIRAAEVLEKEGINCNLTLLFSEAQARACAEAGVYLISPFVGR CCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHH ILDWHKANTGRQDYPAAEDPGVISVTQIYNYYKQHNYKTVVMGASFRNVDEIIELAGCDR HHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCC LTISPTLLSHLQAREGELVRKLAFSGELKDRPQPLTESEFYWQHNSDPMAVAKLAEGICK EEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH FAEDQEKLEKMLLERL HHHHHHHHHHHHHHCC >Mature Secondary Structure TQLDSLRSMTVVVADTGDIEAIKQYQPQDATTNPSLILSASALPQYAPLIDDAIAYAKT CCHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHC KSDCPRQQLVDAEDKLAVNIGLEILKIIPGRISTEVDARLSYDTQATIEKARKLIKLYNE CCCCCHHHHCCCCHHEEEHHHHHHHHHCCCCCCCCHHCEECCCHHHHHHHHHHHHHHHHH AGIENHRILIKIASTWQGIRAAEVLEKEGINCNLTLLFSEAQARACAEAGVYLISPFVGR CCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHH ILDWHKANTGRQDYPAAEDPGVISVTQIYNYYKQHNYKTVVMGASFRNVDEIIELAGCDR HHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCC LTISPTLLSHLQAREGELVRKLAFSGELKDRPQPLTESEFYWQHNSDPMAVAKLAEGICK EEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH FAEDQEKLEKMLLERL HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100