| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is hasR
Identifier: 15603487
GI number: 15603487
Start: 1830252
End: 1832798
Strand: Direct
Name: hasR
Synonym: PM1622
Alternate gene names: NA
Gene position: 1830252-1832798 (Clockwise)
Preceding gene: 15603486
Following gene: 15603488
Centisome position: 81.07
GC content: 38.36
Gene sequence:
>2547_bases ATGCAAAAACAACAACCTTATCCCATTCACCTTGGGATTTTTTTGATGTTGGGTTTACCAACATGGGCGTTCAGTCAAGC TAATTTAGAGAAATCAACAATCAATAAATTAGAAACGATTTTGGTCAATGAGAGTGAAGAGAAAAATAAATTCGATGAGA ATTTGATCAAAACTTATCTGTCTTCGGGTTCTTATTCTTATCTATCGCAATCGGATATCAGTACGTTCAGAGGTAGCTCG GTAGGGGATTTCCTCTCTGGTGTACCAGGAGTTATTGTGGGAAATAAGCGTAATAGCGGCGCTTTATCCGTTAATATTCG AGGAATTGCGAATGAAAATCGTGTGCCTGTTTGGATAGATAAAGGTCTACAATCGGTACCCTCCTACCAAGGTTATGCAG GTTCTTCAACTCGAACCTATTTAGATCCTGATTTGATCAGCCAAGTCGAGATTGAAAAAGGTCCCTCTTTGCAAATGGAC GCAACAGGCGCGACGGGAGGAGTAGTGAGAGTAGAGACTTTACGTTGGCAAGATATTATTCCTCAAGGGAAAAATTGGGG CGTGCGTTTGAAACTAGGGACGATGACTAACACCGTGTCACCTCCCCCTTATTATACAAGAGGAGGATATCAAACTAAGT ATATTAGTAAATGTCTTTCTAATCATACCGGCTTATGTCAAACACAAACATATGCACCAAATGCACGCTATTCTTCTCAT GGCTTTGATTTGAATGCATACAATTATAGCCTGGCTTTTGCTAATAAATGGCAAAATGCTGATCTTGTACTTGCGTATGC AAAACGTAAACAGGGCAACTATTTTGTTGGGCGTCATGGACAAACCCCGGTGATTGAATCCATTGAATTTGAGGAAGATT CAGTAGAAGTCAAAGAGCCTCGCGTTCATGAAGAGGTTGAAATTGGTTCATTAACATTTAAAGAAAATCGCAGCACCTTA TATCGACCGGGTGAAGAAGCCCTGAATACCTCACAAGATAATACCTCTTATCTCGCTAAAATAAATGTCTACAATGATGT TCATCGTTTAGGGTTAGCGTATCGCCATTATCATAGCCGTTTTGGTGAGATTATGAGCTCAATTTTGAATTTCAGAGCGT ATGGCGCATTGCAAGGTGAAGGGACAGAAGTCAAAGTCGATAGCTATCATGCAAATTATAGCTATAACCCAACGACACCT TATGTGAATTTGAATGTTAATGCATATTTTACTGACAGTGATTCGTCTAATTTTACCCCATTTATTGAAGAATATGGTTA CTCTTTATCCAGTCGTCATGCCCATTTTCTGGTTTCTAAGCAGAAAGGGTTAAGTATTGAAAATACTAGCATTTTCCAGC TTAACGACAAACCGTTTAGTTTAAAATATGGTCTTGCGCATAGTTATGAACGGATTTATCAACCACGTAATGCTCAAGCA CGTGTGAGAGCTAAAGGGTATCCAGAAGATGCGATTGGTCCACTTTATATTCGAGATGGTAAGCGTAAAGAATGGAGCGC TTTTGTTGCTGCGAACTATCCAATCACTTCGTGGTTAAAAGCCGACATCGGGCTACGTTATCTTCAATCTACTATTTATG ATTATATTGTGAGAACGGAAAGAGTGAATATTGGAGGGGCATTTGTGCCTAATCCAAATGGACCCGGTAATATTTGGGTG GAAAAATATAAAGATGTTGTGCATAAACAGGCGCCAGTGAAAAATAAAGGCATGTCGCCAATTGTGATGCTCACATTTGA ACCTATTAACGGAGTACAAATTTATACGAAATATGCAGAAGCATTGCGTTCGCCAAGTTTATTCCAAGCAACTAAAGGCT GGTCCATGAGTGCGACGGCAGATAATCTAGAACAATTGAGACCTGAACGAGCCAAAAATTGGGAGGCGGGTATTAACTTG TTTTATGAAAATCTAGGTGGTAAGGACAATATTCTTGGTTTTAAATTGGCGTATTTTAATAATAGGATAAAAGATTATTT GACGCGGAGTTATTCGCCTAAAGATAAAGTGACGCAGACAATTAATATACAAAGTGCACAATTTAAAGGGATTGAGTTAT CAGCGTATTATGATATGGGGAAATTTTACGCAAAATTAGCTGGTACATATTACACAAAAACGAAATTTTGTTTAACAGCA GAACAAGCAGGCAAAGGAGAGCAATGTAATTCAGGTTATATATATCGTAGTAATTTAAATAATGCCGTTCCTCCGCGTTT AAATTTACATGCGACTTTAGGAACCCGTTTGTTTGAACAAAAACTCGATATTGGTGCGCGCTATAGTTACTACAGTAAGC GATTAGTACCAGTGCTTTCTGCAGAACGTTTTGTTAACACATCAAGTATTGAGTGGGCGCCTTATTCCTTAGTAGATTTA TATGCCAATTACAATGTGTCTAATAACCTAAAACTTACGATGACCATGGATAATGTGTTTAATCGCTATTATTTAGATAT CAATAATATGGGATTAAATACCGCACCGGGTAGAACATTGCATTTAGGATTAGAATATCGGTTTTAG
Upstream 100 bases:
>100_bases TGAATGTTATTTATTCACCTCTTGCATTTCTCTTCAGATATGGTTAGATCGTTAATGATTTTCATTATCATCTAATAAAA TGTAATTTCATGGAGAACTT
Downstream 100 bases:
>100_bases TTCATAAGTCATTCACACACATCACCGCACTTTACTTTGATAAGGTGCGGTGATTTTTTTTCTTTTGAAATGTCGGCTAT TATTAGGCATGTTTGAATTA
Product: HasR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MQKQQPYPIHLGIFLMLGLPTWAFSQANLEKSTINKLETILVNESEEKNKFDENLIKTYLSSGSYSYLSQSDISTFRGSS VGDFLSGVPGVIVGNKRNSGALSVNIRGIANENRVPVWIDKGLQSVPSYQGYAGSSTRTYLDPDLISQVEIEKGPSLQMD ATGATGGVVRVETLRWQDIIPQGKNWGVRLKLGTMTNTVSPPPYYTRGGYQTKYISKCLSNHTGLCQTQTYAPNARYSSH GFDLNAYNYSLAFANKWQNADLVLAYAKRKQGNYFVGRHGQTPVIESIEFEEDSVEVKEPRVHEEVEIGSLTFKENRSTL YRPGEEALNTSQDNTSYLAKINVYNDVHRLGLAYRHYHSRFGEIMSSILNFRAYGALQGEGTEVKVDSYHANYSYNPTTP YVNLNVNAYFTDSDSSNFTPFIEEYGYSLSSRHAHFLVSKQKGLSIENTSIFQLNDKPFSLKYGLAHSYERIYQPRNAQA RVRAKGYPEDAIGPLYIRDGKRKEWSAFVAANYPITSWLKADIGLRYLQSTIYDYIVRTERVNIGGAFVPNPNGPGNIWV EKYKDVVHKQAPVKNKGMSPIVMLTFEPINGVQIYTKYAEALRSPSLFQATKGWSMSATADNLEQLRPERAKNWEAGINL FYENLGGKDNILGFKLAYFNNRIKDYLTRSYSPKDKVTQTINIQSAQFKGIELSAYYDMGKFYAKLAGTYYTKTKFCLTA EQAGKGEQCNSGYIYRSNLNNAVPPRLNLHATLGTRLFEQKLDIGARYSYYSKRLVPVLSAERFVNTSSIEWAPYSLVDL YANYNVSNNLKLTMTMDNVFNRYYLDINNMGLNTAPGRTLHLGLEYRF
Sequences:
>Translated_848_residues MQKQQPYPIHLGIFLMLGLPTWAFSQANLEKSTINKLETILVNESEEKNKFDENLIKTYLSSGSYSYLSQSDISTFRGSS VGDFLSGVPGVIVGNKRNSGALSVNIRGIANENRVPVWIDKGLQSVPSYQGYAGSSTRTYLDPDLISQVEIEKGPSLQMD ATGATGGVVRVETLRWQDIIPQGKNWGVRLKLGTMTNTVSPPPYYTRGGYQTKYISKCLSNHTGLCQTQTYAPNARYSSH GFDLNAYNYSLAFANKWQNADLVLAYAKRKQGNYFVGRHGQTPVIESIEFEEDSVEVKEPRVHEEVEIGSLTFKENRSTL YRPGEEALNTSQDNTSYLAKINVYNDVHRLGLAYRHYHSRFGEIMSSILNFRAYGALQGEGTEVKVDSYHANYSYNPTTP YVNLNVNAYFTDSDSSNFTPFIEEYGYSLSSRHAHFLVSKQKGLSIENTSIFQLNDKPFSLKYGLAHSYERIYQPRNAQA RVRAKGYPEDAIGPLYIRDGKRKEWSAFVAANYPITSWLKADIGLRYLQSTIYDYIVRTERVNIGGAFVPNPNGPGNIWV EKYKDVVHKQAPVKNKGMSPIVMLTFEPINGVQIYTKYAEALRSPSLFQATKGWSMSATADNLEQLRPERAKNWEAGINL FYENLGGKDNILGFKLAYFNNRIKDYLTRSYSPKDKVTQTINIQSAQFKGIELSAYYDMGKFYAKLAGTYYTKTKFCLTA EQAGKGEQCNSGYIYRSNLNNAVPPRLNLHATLGTRLFEQKLDIGARYSYYSKRLVPVLSAERFVNTSSIEWAPYSLVDL YANYNVSNNLKLTMTMDNVFNRYYLDINNMGLNTAPGRTLHLGLEYRF >Mature_848_residues MQKQQPYPIHLGIFLMLGLPTWAFSQANLEKSTINKLETILVNESEEKNKFDENLIKTYLSSGSYSYLSQSDISTFRGSS VGDFLSGVPGVIVGNKRNSGALSVNIRGIANENRVPVWIDKGLQSVPSYQGYAGSSTRTYLDPDLISQVEIEKGPSLQMD ATGATGGVVRVETLRWQDIIPQGKNWGVRLKLGTMTNTVSPPPYYTRGGYQTKYISKCLSNHTGLCQTQTYAPNARYSSH GFDLNAYNYSLAFANKWQNADLVLAYAKRKQGNYFVGRHGQTPVIESIEFEEDSVEVKEPRVHEEVEIGSLTFKENRSTL YRPGEEALNTSQDNTSYLAKINVYNDVHRLGLAYRHYHSRFGEIMSSILNFRAYGALQGEGTEVKVDSYHANYSYNPTTP YVNLNVNAYFTDSDSSNFTPFIEEYGYSLSSRHAHFLVSKQKGLSIENTSIFQLNDKPFSLKYGLAHSYERIYQPRNAQA RVRAKGYPEDAIGPLYIRDGKRKEWSAFVAANYPITSWLKADIGLRYLQSTIYDYIVRTERVNIGGAFVPNPNGPGNIWV EKYKDVVHKQAPVKNKGMSPIVMLTFEPINGVQIYTKYAEALRSPSLFQATKGWSMSATADNLEQLRPERAKNWEAGINL FYENLGGKDNILGFKLAYFNNRIKDYLTRSYSPKDKVTQTINIQSAQFKGIELSAYYDMGKFYAKLAGTYYTKTKFCLTA EQAGKGEQCNSGYIYRSNLNNAVPPRLNLHATLGTRLFEQKLDIGARYSYYSKRLVPVLSAERFVNTSSIEWAPYSLVDL YANYNVSNNLKLTMTMDNVFNRYYLDINNMGLNTAPGRTLHLGLEYRF
Specific function: Probable receptor, tonB-dependent [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 95911; Mature: 95911
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKQQPYPIHLGIFLMLGLPTWAFSQANLEKSTINKLETILVNESEEKNKFDENLIKTYL CCCCCCCCEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHH SSGSYSYLSQSDISTFRGSSVGDFLSGVPGVIVGNKRNSGALSVNIRGIANENRVPVWID CCCCCCCCCCCCHHHHCCCCHHHHHCCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEC KGLQSVPSYQGYAGSSTRTYLDPDLISQVEIEKGPSLQMDATGATGGVVRVETLRWQDII CCHHHCCCCCCCCCCCCCEEECHHHHCEEEECCCCCEEEECCCCCCCEEEEEEEEHHHCC PQGKNWGVRLKLGTMTNTVSPPPYYTRGGYQTKYISKCLSNHTGLCQTQTYAPNARYSSH CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCC GFDLNAYNYSLAFANKWQNADLVLAYAKRKQGNYFVGRHGQTPVIESIEFEEDSVEVKEP CEEEECEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCEECCCCCCEECCC RVHEEVEIGSLTFKENRSTLYRPGEEALNTSQDNTSYLAKINVYNDVHRLGLAYRHYHSR CCCCCEEECEEEEECCCCCEECCCHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHH FGEIMSSILNFRAYGALQGEGTEVKVDSYHANYSYNPTTPYVNLNVNAYFTDSDSSNFTP HHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCH FIEEYGYSLSSRHAHFLVSKQKGLSIENTSIFQLNDKPFSLKYGLAHSYERIYQPRNAQA HHHHHCCCCCCCCEEEEEECCCCCEECCCEEEEECCCCEEEEECHHHHHHHHCCCCCCCE RVRAKGYPEDAIGPLYIRDGKRKEWSAFVAANYPITSWLKADIGLRYLQSTIYDYIVRTE EEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEE RVNIGGAFVPNPNGPGNIWVEKYKDVVHKQAPVKNKGMSPIVMLTFEPINGVQIYTKYAE EEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHHHHH ALRSPSLFQATKGWSMSATADNLEQLRPERAKNWEAGINLFYENLGGKDNILGFKLAYFN HHCCCCCEECCCCCCCCCCHHHHHHHCHHHHCCHHHHHHHEEECCCCCCCEEEEEEHHHH NRIKDYLTRSYSPKDKVTQTINIQSAQFKGIELSAYYDMGKFYAKLAGTYYTKTKFCLTA HHHHHHHHCCCCCHHHCEEEEEEECCEECCEEEEEEHHHHHHHHHHHCCEEECEEEEEEH EQAGKGEQCNSGYIYRSNLNNAVPPRLNLHATLGTRLFEQKLDIGARYSYYSKRLVPVLS HHCCCCCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEHHHHHHHHHHHH AERFVNTSSIEWAPYSLVDLYANYNVSNNLKLTMTMDNVFNRYYLDINNMGLNTAPGRTL HHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCEEEEEEECCCCCCCCCCEE HLGLEYRF EEEEEECC >Mature Secondary Structure MQKQQPYPIHLGIFLMLGLPTWAFSQANLEKSTINKLETILVNESEEKNKFDENLIKTYL CCCCCCCCEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHH SSGSYSYLSQSDISTFRGSSVGDFLSGVPGVIVGNKRNSGALSVNIRGIANENRVPVWID CCCCCCCCCCCCHHHHCCCCHHHHHCCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEC KGLQSVPSYQGYAGSSTRTYLDPDLISQVEIEKGPSLQMDATGATGGVVRVETLRWQDII CCHHHCCCCCCCCCCCCCEEECHHHHCEEEECCCCCEEEECCCCCCCEEEEEEEEHHHCC PQGKNWGVRLKLGTMTNTVSPPPYYTRGGYQTKYISKCLSNHTGLCQTQTYAPNARYSSH CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCC GFDLNAYNYSLAFANKWQNADLVLAYAKRKQGNYFVGRHGQTPVIESIEFEEDSVEVKEP CEEEECEEEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCEECCCCCCEECCC RVHEEVEIGSLTFKENRSTLYRPGEEALNTSQDNTSYLAKINVYNDVHRLGLAYRHYHSR CCCCCEEECEEEEECCCCCEECCCHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHH FGEIMSSILNFRAYGALQGEGTEVKVDSYHANYSYNPTTPYVNLNVNAYFTDSDSSNFTP HHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCH FIEEYGYSLSSRHAHFLVSKQKGLSIENTSIFQLNDKPFSLKYGLAHSYERIYQPRNAQA HHHHHCCCCCCCCEEEEEECCCCCEECCCEEEEECCCCEEEEECHHHHHHHHCCCCCCCE RVRAKGYPEDAIGPLYIRDGKRKEWSAFVAANYPITSWLKADIGLRYLQSTIYDYIVRTE EEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEE RVNIGGAFVPNPNGPGNIWVEKYKDVVHKQAPVKNKGMSPIVMLTFEPINGVQIYTKYAE EEECCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHHHHH ALRSPSLFQATKGWSMSATADNLEQLRPERAKNWEAGINLFYENLGGKDNILGFKLAYFN HHCCCCCEECCCCCCCCCCHHHHHHHCHHHHCCHHHHHHHEEECCCCCCCEEEEEEHHHH NRIKDYLTRSYSPKDKVTQTINIQSAQFKGIELSAYYDMGKFYAKLAGTYYTKTKFCLTA HHHHHHHHCCCCCHHHCEEEEEEECCEECCEEEEEEHHHHHHHHHHHCCEEECEEEEEEH EQAGKGEQCNSGYIYRSNLNNAVPPRLNLHATLGTRLFEQKLDIGARYSYYSKRLVPVLS HHCCCCCCCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEHHHHHHHHHHHH AERFVNTSSIEWAPYSLVDLYANYNVSNNLKLTMTMDNVFNRYYLDINNMGLNTAPGRTL HHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCEEEEEEECCCCCCCCCCEE HLGLEYRF EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]