Click here to switch to the map view.

The map label for this gene is napC [H]

Identifier: 15603463

GI number: 15603463

Start: 1809012

End: 1809605

Strand: Direct

Name: napC [H]

Synonym: PM1598

Alternate gene names: 15603463

Gene position: 1809012-1809605 (Clockwise)

Preceding gene: 15603462

Following gene: 15603464

Centisome position: 80.13

GC content: 40.4

Gene sequence:

>594_bases
ATGTTGAACTTAATTAAACGCTTTTGGAAATGGTTTCGCTCGCCCAGTCGTATTGCCGTTGGTACCTTGATTACCCTTGC
TTTTATTGCAGGTATTGTCTCTTGGGTTGGGTTTAATTATGGCTTAGAGCAAACCAATACAGAGGAATTCTGTGTTAGTT
GTCACAGTAATGATGTGTATCCAGAATATTTACATACGGCGCATTATTTAAATCGCAGTGGAGTAAAAGCCACTTGTCCT
GATTGCCATGTACCGCACGAATTTATTCCAAAAATGATCCGTAAAGTCCAAGCCAGTCGAGAAGTGTATGCGCATCTTAT
GGGTTATACGGATACCATTGATAAATTTAACTCCCGTCGTTTGCATATGGCAGAACGTGAATGGGCACGATTAAAAGCCA
ATAACTCGCAGGAATGCCGTAACTGCCATAACTTTGAGAATATGGATTTTAGTCAGCAAAAAACAGTGGCGGAAAAAATG
CATGCACTTGCTATAAAAGAAGAAAAAACCTGTATTGACTGTCACAAAGGGATTGCGCACCAATTACCGGATATGAGCGG
TGTTGAGTCGGGTTTTAGTACGGAACAAAAATAA

Upstream 100 bases:

>100_bases
CTGTTTACAATGCCATGTCTCTCAATCTGATGTTGAGCCGATTATTCAAAATGAATTTAAACCGATGGCTGGTTTTGGTA
AATAAGTTAAGGACGGAACT

Downstream 100 bases:

>100_bases
CACTTTTCTTGTTCTCCCACAGGAAATCTGCATCGTATTCGGGTGCAGATTTTTTTTCATTTTTACGATCATCCTCACAA
CCTTTTCGCTGATAAATAGG

Product: NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLNLIKRFWKWFRSPSRIAVGTLITLAFIAGIVSWVGFNYGLEQTNTEEFCVSCHSNDVYPEYLHTAHYLNRSGVKATCP
DCHVPHEFIPKMIRKVQASREVYAHLMGYTDTIDKFNSRRLHMAEREWARLKANNSQECRNCHNFENMDFSQQKTVAEKM
HALAIKEEKTCIDCHKGIAHQLPDMSGVESGFSTEQK

Sequences:

>Translated_197_residues
MLNLIKRFWKWFRSPSRIAVGTLITLAFIAGIVSWVGFNYGLEQTNTEEFCVSCHSNDVYPEYLHTAHYLNRSGVKATCP
DCHVPHEFIPKMIRKVQASREVYAHLMGYTDTIDKFNSRRLHMAEREWARLKANNSQECRNCHNFENMDFSQQKTVAEKM
HALAIKEEKTCIDCHKGIAHQLPDMSGVESGFSTEQK
>Mature_197_residues
MLNLIKRFWKWFRSPSRIAVGTLITLAFIAGIVSWVGFNYGLEQTNTEEFCVSCHSNDVYPEYLHTAHYLNRSGVKATCP
DCHVPHEFIPKMIRKVQASREVYAHLMGYTDTIDKFNSRRLHMAEREWARLKANNSQECRNCHNFENMDFSQQKTVAEKM
HALAIKEEKTCIDCHKGIAHQLPDMSGVESGFSTEQK

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=192, Percent_Identity=64.5833333333333, Blast_Score=279, Evalue=7e-77,
Organism=Escherichia coli, GI1787230, Length=192, Percent_Identity=46.875, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1788181, Length=146, Percent_Identity=43.8356164383562, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22773; Mature: 22773

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLIKRFWKWFRSPSRIAVGTLITLAFIAGIVSWVGFNYGLEQTNTEEFCVSCHSNDVY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC
PEYLHTAHYLNRSGVKATCPDCHVPHEFIPKMIRKVQASREVYAHLMGYTDTIDKFNSRR
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LHMAEREWARLKANNSQECRNCHNFENMDFSQQKTVAEKMHALAIKEEKTCIDCHKGIAH
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QLPDMSGVESGFSTEQK
HCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MLNLIKRFWKWFRSPSRIAVGTLITLAFIAGIVSWVGFNYGLEQTNTEEFCVSCHSNDVY
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC
PEYLHTAHYLNRSGVKATCPDCHVPHEFIPKMIRKVQASREVYAHLMGYTDTIDKFNSRR
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LHMAEREWARLKANNSQECRNCHNFENMDFSQQKTVAEKMHALAIKEEKTCIDCHKGIAH
HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QLPDMSGVESGFSTEQK
HCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]