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The map label for this gene is napD [H]

Identifier: 15603458

GI number: 15603458

Start: 1804072

End: 1804347

Strand: Direct

Name: napD [H]

Synonym: PM1593

Alternate gene names: 15603458

Gene position: 1804072-1804347 (Clockwise)

Preceding gene: 15603457

Following gene: 15603459

Centisome position: 79.92

GC content: 42.75

Gene sequence:

>276_bases
ATGACTGAACAAATCACAATGGAAAATGCGAAAAATTGGCATGTCTGTGGGCTTGTGATTCAAGGGAATCCCCAAAAATT
AGAAGCAATTCAGACCGCACTTTTAGCAATACCGTATACGGAAATTCCTGCATTGGACGCGGAAACCGGTAAGCTTGTTG
TGGTGATGCAATCGCACGATCAACATCTTTTACATCAACAAATGGAAGCGACACGCGATATTGACGGCGTCATTGACGTG
TCCTTGGTTTACCATCAACAAGACGAAAACGAATAA

Upstream 100 bases:

>100_bases
AGCGTTAGAAAACTGTAATGGCTGTGGCGCCTGTTTACGCAGTTGTCCGGTGTCAGCGATTACCTTGTCATTGGGACAAC
AACATCAAGTAGAAAAATAA

Downstream 100 bases:

>100_bases
AACATCACATAATTCAATATAGTGGGGGAACGCTATGAAGATGAATTTAAGTCGTCGTGACTTTATGAAAACCAATGCGG
CGGTTGCAGCTGCAGCGGTC

Product: NapD

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTEQITMENAKNWHVCGLVIQGNPQKLEAIQTALLAIPYTEIPALDAETGKLVVVMQSHDQHLLHQQMEATRDIDGVIDV
SLVYHQQDENE

Sequences:

>Translated_91_residues
MTEQITMENAKNWHVCGLVIQGNPQKLEAIQTALLAIPYTEIPALDAETGKLVVVMQSHDQHLLHQQMEATRDIDGVIDV
SLVYHQQDENE
>Mature_90_residues
TEQITMENAKNWHVCGLVIQGNPQKLEAIQTALLAIPYTEIPALDAETGKLVVVMQSHDQHLLHQQMEATRDIDGVIDVS
LVYHQQDENE

Specific function: Plays a role in the correct assembly of subunits of the periplasmic napAB enzyme [H]

COG id: COG3062

COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788535, Length=78, Percent_Identity=44.8717948717949, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005623 [H]

Pfam domain/function: PF03927 NapD [H]

EC number: NA

Molecular weight: Translated: 10248; Mature: 10117

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQITMENAKNWHVCGLVIQGNPQKLEAIQTALLAIPYTEIPALDAETGKLVVVMQSHD
CCCEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
QHLLHQQMEATRDIDGVIDVSLVYHQQDENE
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure 
TEQITMENAKNWHVCGLVIQGNPQKLEAIQTALLAIPYTEIPALDAETGKLVVVMQSHD
CCEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
QHLLHQQMEATRDIDGVIDVSLVYHQQDENE
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]